Sequence Description Alias PCC hrr evm.model.tig00021720.19 (at1g75660 : 283.0) Encodes a protein with similarity to yeast 5'-3'exonucleases and can functionally complement the yeast mutations. In Arabidopsis XRN3 acts as a suppressor of posttranscriptional gene silencing. Mutants accumulate excised miRNA products suggesting that XRN3 is involved in degradation of these products.; 5'-3' exoribonuclease 3 (XRN3); CONTAINS InterPro DOMAIN/s: 5'-3' exoribonuclease 2 (InterPro:IPR017151), Zinc finger, CCHC-type (InterPro:IPR001878), Putative 5-3 exonuclease (InterPro:IPR004859); BEST Arabidopsis thaliana protein match is: exoribonuclease 2 (TAIR:AT5G42540.1); Has 4264 Blast hits to 3505 proteins in 442 species: Archae - 2; Bacteria - 295; Metazoa - 1361; Fungi - 725; Plants - 751; Viruses - 31; Other Eukaryotes - 1099 (source: NCBI BLink). & (reliability: 566.0) & (original description: no original description) 0.9511111731907771 4 evm.model.tig00020912.86 (at1g08600 : 154.0) ATRX; FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: homolog of RAD54 (TAIR:AT3G19210.1). & (q7g8y3|isw2_orysa : 84.7) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 308.0) & (original description: no original description) 0.9500486760373301 3 evm.model.tig00000113.27 no hits & (original description: no original description) 0.9494598055995837 3 evm.model.tig00020510.44 no hits & (original description: no original description) 0.9486433112126506 4 evm.model.tig00001484.7 no hits & (original description: no original description) 0.9380224283138033 5 evm.model.tig00000788.2 no hits & (original description: no original description) 0.937914133876995 6 evm.model.tig00020713.4 no hits & (original description: no original description) 0.9355019285650729 7 evm.model.tig00000552.22 no hits & (original description: no original description) 0.935486862748612 13 evm.model.tig00020629.19 no hits & (original description: no original description) 0.9342933700347021 24 evm.model.tig00000767.3 no hits & (original description: no original description) 0.9342015279172726 10 evm.model.tig00020801.89 no hits & (original description: no original description) 0.9311797948749013 11 evm.model.tig00021043.3 no hits & (original description: no original description) 0.9310710601000979 38 evm.model.tig00000057.20 no hits & (original description: no original description) 0.9290279218312599 13 evm.model.tig00000852.25 no hits & (original description: no original description) 0.9267393251987414 43 evm.model.tig00021035.16 no hits & (original description: no original description) 0.9256674582849578 15 evm.model.tig00001155.19 no hits & (original description: no original description) 0.9226628233560084 28 evm.model.tig00000480.50 no hits & (original description: no original description) 0.9213930662007903 72 evm.model.tig00000430.78 no hits & (original description: no original description) 0.9213159139500543 18 evm.model.tig00000507.19 (at3g59950 : 109.0) Peptidase family C54 protein; FUNCTIONS IN: peptidase activity; INVOLVED IN: autophagy; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C54 (InterPro:IPR005078); BEST Arabidopsis thaliana protein match is: Peptidase family C54 protein (TAIR:AT2G44140.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 218.0) & (original description: no original description) 0.919916294506778 19 evm.model.tig00020943.98 no hits & (original description: no original description) 0.918506165230554 25 evm.model.tig00000385.29 no hits & (original description: no original description) 0.917031475784282 22 evm.model.tig00020876.19 (at5g53080 : 80.5) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; LOCATED IN: chloroplast; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 161.0) & (original description: no original description) 0.916780246854053 48 evm.model.tig00020572.43 no hits & (original description: no original description) 0.915562692902311 52 evm.model.tig00000042.27 no hits & (original description: no original description) 0.9151975081285086 83 evm.model.tig00000128.10 no hits & (original description: no original description) 0.9150663287672022 25 evm.model.tig00021037.62 no hits & (original description: no original description) 0.9146299178983117 29 evm.model.tig00021127.97 no hits & (original description: no original description) 0.913628720904755 27 evm.model.tig00000254.83 no hits & (original description: no original description) 0.9134335725035521 93 evm.model.tig00020562.34 no hits & (original description: no original description) 0.9131349116590178 29 evm.model.tig00021346.1 no hits & (original description: no original description) 0.9128888352439657 30 evm.model.tig00020539.44 no hits & (original description: no original description) 0.912817461507 31 evm.model.tig00021504.9 no hits & (original description: no original description) 0.9120234516685101 36 evm.model.tig00020510.91 no hits & (original description: no original description) 0.9117404599918483 39 evm.model.tig00000842.27 no hits & (original description: no original description) 0.9109643432152944 35 evm.model.tig00021043.14 no hits & (original description: no original description) 0.9108909045073604 36 evm.model.tig00020510.27 (o49230|etr1_braol : 145.0) Ethylene receptor (EC 2.7.13.3) - Brassica oleracea (Wild cabbage) & (at1g66340 : 143.0) Similar to prokaryote sensory transduction proteins. Contains a histidine kinase and a response regulator domain. Homodimer. Membrane component. Binds ethylene. Mutations affect ethylene binding and metabolism of other plant hormones such as auxin, cytokinins, ABA and gibberellic acid. Ethylene receptor. Has histidine kinase activity. Is regulated by RTE1.; ETHYLENE RESPONSE 1 (ETR1); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), Signal transduction histidine kinase, core (InterPro:IPR005467), Signal transduction histidine kinase, hybrid-type, ethylene sensor (InterPro:IPR014525), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), GAF (InterPro:IPR003018), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: ethylene response sensor 1 (TAIR:AT2G40940.1); Has 102721 Blast hits to 98263 proteins in 3046 species: Archae - 757; Bacteria - 90102; Metazoa - 18; Fungi - 1611; Plants - 2314; Viruses - 21; Other Eukaryotes - 7898 (source: NCBI BLink). & (reliability: 258.0) & (original description: no original description) 0.9096472839530033 56 evm.model.tig00022075.98 no hits & (original description: no original description) 0.9083388272043234 71 evm.model.tig00000093.177 no hits & (original description: no original description) 0.907400840786142 41 evm.model.tig00000803.5 no hits & (original description: no original description) 0.907247436107237 80 evm.model.tig00000157.80 no hits & (original description: no original description) 0.9057569781187932 43 evm.model.tig00000459.52 no hits & (original description: no original description) 0.9037481652663761 86 evm.model.tig00001343.11 no hits & (original description: no original description) 0.9033498623559787 92 evm.model.tig00000158.93 (at1g27320 : 149.0) Encodes a histidine kinases, a cytokinin receptor that controls cytokinin-mediated leaf longevity through a specific phosphorylation of the response regulator, ARR2.; histidine kinase 3 (HK3); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 2 (TAIR:AT5G35750.1); Has 124308 Blast hits to 110912 proteins in 3043 species: Archae - 772; Bacteria - 110408; Metazoa - 31; Fungi - 2185; Plants - 2022; Viruses - 28; Other Eukaryotes - 8862 (source: NCBI BLink). & (q9m7m1|etr1_prupe : 128.0) Ethylene receptor (EC 2.7.13.3) - Prunus persica (Peach) & (reliability: 298.0) & (original description: no original description) 0.9019879461813785 56 evm.model.tig00000361.37 no hits & (original description: no original description) 0.9019855315384845 50 evm.model.tig00000796.12 no hits & (original description: no original description) 0.9014911823266669 51 evm.model.tig00020710.50 no hits & (original description: no original description) 0.901340975952453 74 evm.model.tig00021518.26 no hits & (original description: no original description) 0.9013055784614733 54 evm.model.tig00020685.5 no hits & (original description: no original description) 0.9012929928653961 55 evm.model.tig00001250.12 no hits & (original description: no original description) 0.9001040052737754 80 evm.model.tig00020904.26 no hits & (original description: no original description) 0.8982821209002163 58 evm.model.tig00001373.6 (at5g48960 : 101.0) HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase; FUNCTIONS IN: 5'-nucleotidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase (InterPro:IPR008380); BEST Arabidopsis thaliana protein match is: HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase (TAIR:AT1G75210.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 191.8) & (original description: no original description) 0.8975321404708555 59 evm.model.tig00021070.62 no hits & (original description: no original description) 0.8974843207089752 60 evm.model.tig00000383.18 no hits & (original description: no original description) 0.8963564567747953 96 evm.model.tig00001067.9 no hits & (original description: no original description) 0.895776642463551 62 evm.model.tig00021073.2 no hits & (original description: no original description) 0.8957290049055538 63 evm.model.tig00021037.57 (q5jk52|nadk1_orysa : 89.7) Probable NAD kinase 1 (EC 2.7.1.23) - Oryza sativa (Rice) & (at3g21070 : 80.9) Encodes a protein with NAD(H) kinase activity.; NAD kinase 1 (NADK1); FUNCTIONS IN: NAD+ kinase activity, NADH kinase activity; INVOLVED IN: NADP biosynthetic process, response to virus, response to hydrogen peroxide, pyridine nucleotide biosynthetic process, response to ionizing radiation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: ATP-NAD kinase, PpnK-type (InterPro:IPR016064), ATP-NAD/AcoX kinase (InterPro:IPR002504), ATP-NAD kinase, PpnK-type, all-beta (InterPro:IPR017437); BEST Arabidopsis thaliana protein match is: NAD kinase 2 (TAIR:AT1G21640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 161.8) & (original description: no original description) 0.8956529483048697 64 evm.model.tig00020943.43 (at5g52790 : 182.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF21 (InterPro:IPR002550), Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: CBS domain-containing protein with a domain of unknown function (DUF21) (TAIR:AT2G14520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 364.0) & (original description: no original description) 0.8955804668205649 65 evm.model.tig00020563.170 no hits & (original description: no original description) 0.8950268693465316 66 evm.model.tig00020904.122 no hits & (original description: no original description) 0.8948902499390753 67 evm.model.tig00000385.14 no hits & (original description: no original description) 0.8946529520181092 69 evm.model.tig00021590.9 no hits & (original description: no original description) 0.8944627384047021 71 evm.model.tig00020592.15 no hits & (original description: no original description) 0.8941027339789003 99 evm.model.tig00000219.4 (at1g27320 : 135.0) Encodes a histidine kinases, a cytokinin receptor that controls cytokinin-mediated leaf longevity through a specific phosphorylation of the response regulator, ARR2.; histidine kinase 3 (HK3); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 2 (TAIR:AT5G35750.1); Has 124308 Blast hits to 110912 proteins in 3043 species: Archae - 772; Bacteria - 110408; Metazoa - 31; Fungi - 2185; Plants - 2022; Viruses - 28; Other Eukaryotes - 8862 (source: NCBI BLink). & (o81122|etr1_maldo : 112.0) Ethylene receptor (EC 2.7.13.3) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 270.0) & (original description: no original description) 0.892332668958499 77 evm.model.tig00001487.10 no hits & (original description: no original description) 0.8918321401144406 86 evm.model.tig00000984.6 no hits & (original description: no original description) 0.8917438282551114 79 evm.model.tig00000325.7 no hits & (original description: no original description) 0.8914732611944863 80 evm.model.tig00000630.16 no hits & (original description: no original description) 0.890837651380242 83 evm.model.tig00000989.29 no hits & (original description: no original description) 0.8907486646489268 84 evm.model.tig00020892.23 (at5g35930 : 80.1) AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: phosphopantetheine binding, acyl carrier activity, catalytic activity, AMP binding, cofactor binding; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphopantetheine-binding (InterPro:IPR006163), Pyrrolo-quinoline quinone beta-propeller repeat (InterPro:IPR018391), Pyrrolo-quinoline quinone repeat (InterPro:IPR002372), AMP-dependent synthetase/ligase (InterPro:IPR000873), Phosphopantetheine attachment site (InterPro:IPR006162), Acyl carrier protein-like (InterPro:IPR009081), AMP-binding, conserved site (InterPro:IPR020845), Quinonprotein alcohol dehydrogenase-like (InterPro:IPR011047); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT3G16170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 160.2) & (original description: no original description) 0.8903854031416435 88 evm.model.tig00021569.15 no hits & (original description: no original description) 0.8896685979112628 89 evm.model.tig00000403.86 no hits & (original description: no original description) 0.8882639643422734 93 evm.model.tig00020556.86 (at5g11850 : 160.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: protein tyrosine kinase family protein (TAIR:AT1G73660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 304.0) & (original description: no original description) 0.8879978653657128 94 evm.model.tig00000405.53 no hits & (original description: no original description) 0.887318190255207 96 evm.model.tig00021687.5 no hits & (original description: no original description) 0.887170856678052 97 evm.model.tig00020830.109 (at1g05120 : 89.4) Helicase protein with RING/U-box domain; FUNCTIONS IN: helicase activity, DNA binding, zinc ion binding, ATP binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G02670.1); Has 29218 Blast hits to 14448 proteins in 1607 species: Archae - 124; Bacteria - 8622; Metazoa - 6656; Fungi - 6694; Plants - 2674; Viruses - 189; Other Eukaryotes - 4259 (source: NCBI BLink). & (reliability: 178.8) & (original description: no original description) 0.8866363275270924 98