Sequence Description Alias PCC hrr evm.model.tig00021493.32 (at5g60230 : 88.2) putative subunit of tRNA splicing endonuclease; splicing endonuclease 2 (SEN2); CONTAINS InterPro DOMAIN/s: tRNA intron endonuclease, catalytic domain-like (InterPro:IPR006677), tRNA-intron endonuclease (InterPro:IPR006676), Endonuclease TnsA, N-terminal/resolvase Hjc/tRNA endonuclease, C-terminal (InterPro:IPR011856), tRNA intron endonuclease, N-terminal (InterPro:IPR006678); BEST Arabidopsis thaliana protein match is: splicing endonuclease 1 (TAIR:AT3G45590.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q5z6b1|sen2_orysa : 84.7) Probable tRNA-splicing endonuclease subunit Sen2 (EC 3.1.27.9) (tRNA-intron endonuclease Sen2) - Oryza sativa (Rice) & (reliability: 176.4) & (original description: no original description) 0.9423610585449002 1 evm.model.tig00020610.128 no hits & (original description: no original description) 0.9330046270524944 6 evm.model.tig00000880.15 no hits & (original description: no original description) 0.9328396324125673 4 evm.model.tig00020537.33 no hits & (original description: no original description) 0.925244518615804 16 evm.model.tig00020675.81 (at3g55850 : 83.2) Encodes a product that might regulate nucleo-cytoplasmic trafficking of an intermediate(s) involved in phyA signal transduction. Differs from isoform 2 only in the first few N-terminal amino acids.; LONG AFTER FAR-RED 3 (LAF3); FUNCTIONS IN: hydrolase activity, hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds; INVOLVED IN: biological_process unknown; LOCATED IN: perinuclear region of cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amidohydrolase 3 (InterPro:IPR013108), Metal-dependent hydrolase, composite domain (InterPro:IPR011059); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 166.4) & (original description: no original description) 0.923849881432688 37 evm.model.tig00020553.72 no hits & (original description: no original description) 0.9210384023062685 6 evm.model.tig00000254.119 no hits & (original description: no original description) 0.9198035271970897 7 evm.model.tig00021537.7 no hits & (original description: no original description) 0.9191684418449176 49 evm.model.tig00000792.48 no hits & (original description: no original description) 0.918666121688143 9 evm.model.tig00021504.10 no hits & (original description: no original description) 0.9164442552317313 18 evm.model.tig00020848.33 no hits & (original description: no original description) 0.9149581504795921 11 evm.model.tig00000093.231 no hits & (original description: no original description) 0.9124284140085446 36 evm.model.tig00001073.14 no hits & (original description: no original description) 0.9112268720736549 13 evm.model.tig00000293.13 no hits & (original description: no original description) 0.9108850636653171 14 evm.model.tig00020614.121 no hits & (original description: no original description) 0.9105187339258162 15 evm.model.tig00000821.13 no hits & (original description: no original description) 0.9104985779229676 16 evm.model.tig00000241.198 no hits & (original description: no original description) 0.9096054007069782 35 evm.model.tig00000792.47 (at1g56290 : 184.0) CwfJ-like family protein; CONTAINS InterPro DOMAIN/s: Cwf19-like, C-terminal domain-1 (InterPro:IPR006768), Cwf19-like protein, C-terminal domain-2 (InterPro:IPR006767); BEST Arabidopsis thaliana protein match is: CwfJ-like family protein / zinc finger (CCCH-type) family protein (TAIR:AT5G56900.2); Has 2474 Blast hits to 2009 proteins in 284 species: Archae - 2; Bacteria - 39; Metazoa - 1047; Fungi - 300; Plants - 173; Viruses - 2; Other Eukaryotes - 911 (source: NCBI BLink). & (reliability: 368.0) & (original description: no original description) 0.9092032234081986 32 evm.model.tig00000718.22 (at2g01490 : 286.0) phytanoyl-CoA dioxygenase (PhyH) family protein; FUNCTIONS IN: phytanoyl-CoA dioxygenase activity; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phytanoyl-CoA dioxygenase (InterPro:IPR008775); Has 2926 Blast hits to 2921 proteins in 334 species: Archae - 4; Bacteria - 485; Metazoa - 347; Fungi - 101; Plants - 64; Viruses - 0; Other Eukaryotes - 1925 (source: NCBI BLink). & (reliability: 572.0) & (original description: no original description) 0.908096891346137 55 evm.model.tig00020553.51 no hits & (original description: no original description) 0.9075720332895665 41 evm.model.tig00000269.94 no hits & (original description: no original description) 0.9046195491733744 21 evm.model.tig00000293.23 no hits & (original description: no original description) 0.903641810751217 71 evm.model.tig00000655.63 (at5g58370 : 142.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: GTP binding; INVOLVED IN: barrier septum formation; LOCATED IN: intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP-binding protein, HSR1-related (InterPro:IPR002917), GTP-binding protein, ribosome biogenesis, YsxC (InterPro:IPR019987); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G22870.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 284.0) & (original description: no original description) 0.90296123974804 23 evm.model.tig00000385.25 no hits & (original description: no original description) 0.9019096021775013 96 evm.model.tig00000865.59 (at3g20540 : 295.0) polymerase gamma 1 (POLGAMMA1); FUNCTIONS IN: 3'-5' exonuclease activity, DNA-directed DNA polymerase activity, DNA binding, nucleic acid binding; INVOLVED IN: DNA replication, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: male gametophyte; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), DNA-directed DNA polymerase, family A, palm domain (InterPro:IPR001098), DNA polymerase A domain (InterPro:IPR002298), 3'-5' exonuclease (InterPro:IPR002562); BEST Arabidopsis thaliana protein match is: polymerase gamma 2 (TAIR:AT1G50840.1). & (reliability: 590.0) & (original description: no original description) 0.9017295802766112 91 evm.model.tig00000190.56 no hits & (original description: no original description) 0.9008672560969395 38 evm.model.tig00021435.6 no hits & (original description: no original description) 0.9003461351289554 78 evm.model.tig00001086.4 no hits & (original description: no original description) 0.8996252900617759 28 evm.model.tig00020746.18 (at3g09660 : 157.0) minichromosome maintenance 8 (MCM8); FUNCTIONS IN: nucleoside-triphosphatase activity, DNA-dependent ATPase activity, DNA binding, nucleotide binding, ATP binding; INVOLVED IN: DNA-dependent DNA replication initiation, DNA replication; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), ATPase, AAA+ type, core (InterPro:IPR003593), DNA-dependent ATPase MCM (InterPro:IPR001208); BEST Arabidopsis thaliana protein match is: Minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT2G16440.1); Has 4027 Blast hits to 3851 proteins in 539 species: Archae - 371; Bacteria - 134; Metazoa - 1249; Fungi - 930; Plants - 423; Viruses - 3; Other Eukaryotes - 917 (source: NCBI BLink). & (q43704|mcm3_maize : 118.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 314.0) & (original description: no original description) 0.8994057358793808 71 evm.model.tig00000857.13 no hits & (original description: no original description) 0.8992937924670616 30 evm.model.tig00001029.32 (original description: no original description) 0.8989157629671743 32 evm.model.tig00001366.5 (at3g01310 : 273.0) Phosphoglycerate mutase-like family protein; FUNCTIONS IN: oxidoreductase activity, transition metal ion binding, acid phosphatase activity; INVOLVED IN: oxidation reduction; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATP-grasp fold, RimK-type (InterPro:IPR013651), Histidine phosphatase superfamily, clade-2 (InterPro:IPR000560), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase-like family protein (TAIR:AT5G15070.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 540.0) & (original description: no original description) 0.8981291530192438 80 evm.model.tig00000498.73 (at1g16540 : 184.0) Encodes molybdenum cofactor sulfurase. Involved in Moco biosynthesis. Involved in the conversion of ABA-aldehyde to ABA, the last step of abscisic acid (ABA) biosynthesis. <i>sir</i> loss-of-function mutants are resistant to sirtinol, a modulator of auxin signaling.N terminal domain is similar to bacterial NifS suggesting a common mechanism for sulphur mobilization and transfer. Also involved in protein import into chloroplasts.; ABA DEFICIENT 3 (ABA3); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), MOSC, N-terminal beta barrel (InterPro:IPR005303), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Molybdenum cofactor sulfurase, C-terminal (InterPro:IPR005302), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Molybdenum cofactor sulfurase family protein (TAIR:AT1G30910.1); Has 7940 Blast hits to 7904 proteins in 1914 species: Archae - 94; Bacteria - 5396; Metazoa - 390; Fungi - 394; Plants - 292; Viruses - 1; Other Eukaryotes - 1373 (source: NCBI BLink). & (q655r6|mocos_orysa : 120.0) Molybdenum cofactor sulfurase (EC 4.4.-.-) (MoCo sulfurase) (MOS) - Oryza sativa (Rice) & (reliability: 368.0) & (original description: no original description) 0.8970644332716309 34 evm.model.tig00001339.21 no hits & (original description: no original description) 0.8963508583018354 35 evm.model.tig00000203.26 no hits & (original description: no original description) 0.8962360579482785 48 evm.model.tig00000655.58 (at4g09980 : 124.0) EMBRYO DEFECTIVE 1691 (EMB1691); FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity, nucleic acid binding; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA methylase, N-6 adenine-specific, conserved site (InterPro:IPR002052), MT-A70 (InterPro:IPR007757); BEST Arabidopsis thaliana protein match is: mRNAadenosine methylase (TAIR:AT4G10760.1); Has 29929 Blast hits to 18009 proteins in 1024 species: Archae - 39; Bacteria - 4517; Metazoa - 16101; Fungi - 2453; Plants - 1900; Viruses - 259; Other Eukaryotes - 4660 (source: NCBI BLink). & (reliability: 248.0) & (original description: no original description) 0.8957248265914746 37 evm.model.tig00001600.13 (at4g11330 : 367.0) MAP kinase; MAP kinase 5 (MPK5); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), JNK MAP kinase (InterPro:IPR008351), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: MAP kinase 4 (TAIR:AT4G01370.1); Has 126445 Blast hits to 124887 proteins in 4831 species: Archae - 118; Bacteria - 13666; Metazoa - 48018; Fungi - 12607; Plants - 30504; Viruses - 585; Other Eukaryotes - 20947 (source: NCBI BLink). & (q336x9|mpk6_orysa : 366.0) Mitogen-activated protein kinase 6 (EC 2.7.11.24) (MAP kinase 6) - Oryza sativa (Rice) & (reliability: 734.0) & (original description: no original description) 0.8935531032205196 67 evm.model.tig00000478.18 no hits & (original description: no original description) 0.8931546385783283 56 evm.model.tig00020961.49 no hits & (original description: no original description) 0.8928096876171016 42 evm.model.tig00001214.8 (at2g43180 : 179.0) Phosphoenolpyruvate carboxylase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Isocitrate lyase/phosphorylmutase (InterPro:IPR000918); BEST Arabidopsis thaliana protein match is: Phosphoenolpyruvate carboxylase family protein (TAIR:AT1G77060.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q05957|cppm_diaca : 146.0) Putative carboxyvinyl-carboxyphosphonate phosphorylmutase (EC 2.7.8.23) (Carboxyphosphonoenolpyruvate phosphonomutase) (CPEP phosphonomutase) (PSR132) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 358.0) & (original description: no original description) 0.8927976971968815 62 evm.model.tig00020553.62 no hits & (original description: no original description) 0.8922426917932771 45 evm.model.tig00021728.10 no hits & (original description: no original description) 0.8917802005071828 94 evm.model.tig00021127.143 no hits & (original description: no original description) 0.8889025718770615 48 evm.model.tig00000383.100 no hits & (original description: no original description) 0.8875784116253537 50 evm.model.tig00000178.72 no hits & (original description: no original description) 0.8859025181745422 72 evm.model.tig00000949.14 no hits & (original description: no original description) 0.8839750387665225 86 evm.model.tig00021244.25 (at4g21770 : 100.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase, RsuA and RluB/C/D/E/F (InterPro:IPR006145); Has 5935 Blast hits to 5933 proteins in 1806 species: Archae - 0; Bacteria - 4596; Metazoa - 112; Fungi - 68; Plants - 78; Viruses - 0; Other Eukaryotes - 1081 (source: NCBI BLink). & (reliability: 200.0) & (original description: no original description) 0.8839668422421264 55 evm.model.tig00000178.20 no hits & (original description: no original description) 0.8828652001209688 56 evm.model.tig00001437.2 (at1g17850 : 107.0) Rhodanese/Cell cycle control phosphatase superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: Rhodanese/Cell cycle control phosphatase superfamily protein (TAIR:AT2G40760.1). & (reliability: 214.0) & (original description: no original description) 0.882581135395533 57 evm.model.tig00021127.99 no hits & (original description: no original description) 0.8821617095176095 70 evm.model.tig00001130.21 (at5g01230 : 171.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity, nucleic acid binding; INVOLVED IN: methylation, rRNA methylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal RNA methyltransferase J (InterPro:IPR015507), Ribosomal RNA methyltransferase RrmJ/FtsJ (InterPro:IPR002877); BEST Arabidopsis thaliana protein match is: FtsJ-like methyltransferase family protein (TAIR:AT4G25730.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 342.0) & (original description: no original description) 0.8821268216579391 61 evm.model.tig00001093.8 no hits & (original description: no original description) 0.8814131560981292 93 evm.model.tig00020710.66 no hits & (original description: no original description) 0.8810489397577791 66 evm.model.tig00001127.31 no hits & (original description: no original description) 0.8809773901333083 64 evm.model.tig00020848.16 no hits & (original description: no original description) 0.879455255973032 90 evm.model.tig00000718.42 (at5g58370 : 120.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: GTP binding; INVOLVED IN: barrier septum formation; LOCATED IN: intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP-binding protein, HSR1-related (InterPro:IPR002917), GTP-binding protein, ribosome biogenesis, YsxC (InterPro:IPR019987); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G22870.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 240.0) & (original description: no original description) 0.8790359450733389 68 evm.model.tig00020704.19 no hits & (original description: no original description) 0.8784395862517901 69 evm.model.tig00020723.16 no hits & (original description: no original description) 0.8782303503765835 70 evm.model.tig00001127.30 no hits & (original description: no original description) 0.8775659789481988 73 evm.model.tig00021719.14 no hits & (original description: no original description) 0.8770893084855039 75 evm.model.tig00021680.3 no hits & (original description: no original description) 0.8767654684640056 78 evm.model.tig00020603.75 no hits & (original description: no original description) 0.8755952124302383 81 evm.model.tig00021348.11 no hits & (original description: no original description) 0.8729655108784833 88 evm.model.tig00020610.61 no hits & (original description: no original description) 0.8716250684199977 96