Sequence Description Alias PCC hrr evm.model.tig00000350.34 no hits & (original description: no original description) 0.9469873550539859 7 evm.model.tig00000042.105 no hits & (original description: no original description) 0.939172839667852 18 evm.model.tig00000704.72 no hits & (original description: no original description) 0.9384884952450957 11 evm.model.tig00020531.56 no hits & (original description: no original description) 0.9371603336432254 5 evm.model.tig00001532.9 no hits & (original description: no original description) 0.9246175838112434 15 evm.model.tig00001542.23 "(at5g08190 : 140.0) ""nuclear factor Y, subunit B12"" (NF-YB12); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit B13 (TAIR:AT5G23090.4); Has 1494 Blast hits to 1494 proteins in 245 species: Archae - 0; Bacteria - 0; Metazoa - 489; Fungi - 378; Plants - 520; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). & (reliability: 280.0) & (original description: no original description)" 0.9230667253647177 14 evm.model.tig00000411.74 no hits & (original description: no original description) 0.9193575170437757 21 evm.model.tig00000704.43 no hits & (original description: no original description) 0.9177612333570409 10 evm.model.tig00000133.51 no hits & (original description: no original description) 0.917653790909585 49 evm.model.tig00020780.31 (original description: no original description) 0.9158886729222431 28 evm.model.tig00000944.55 no hits & (original description: no original description) 0.9092158335793634 61 evm.model.tig00000551.18 no hits & (original description: no original description) 0.9083782275130813 48 evm.model.tig00000093.81 no hits & (original description: no original description) 0.906350949513346 27 evm.model.tig00021612.29 no hits & (original description: no original description) 0.9037545709017709 34 evm.model.tig00000269.28 no hits & (original description: no original description) 0.9015833462138163 21 evm.model.tig00000037.36 no hits & (original description: no original description) 0.9010891272799992 22 evm.model.tig00021441.11 no hits & (original description: no original description) 0.8985886024999326 17 evm.model.tig00020723.69 no hits & (original description: no original description) 0.897008340134144 63 evm.model.tig00000319.30 no hits & (original description: no original description) 0.8950913258722565 35 evm.model.tig00000144.125 (at3g18430 : 116.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992); BEST Arabidopsis thaliana protein match is: calmodulin 9 (TAIR:AT3G51920.1). & (p04464|calm_wheat : 80.5) Calmodulin (CaM) - Triticum aestivum (Wheat) & (reliability: 232.0) & (original description: no original description) 0.8950270522842607 71 evm.model.tig00000806.51 no hits & (original description: no original description) 0.8922270071038172 21 evm.model.tig00021617.21 no hits & (original description: no original description) 0.891470466686193 27 evm.model.tig00000133.2 (at1g26550 : 137.0) FKBP-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: isomerase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-prolyl cis-trans isomerase, PpiC-type (InterPro:IPR000297); BEST Arabidopsis thaliana protein match is: peptidylprolyl cis/trans isomerase, NIMA-interacting 1 (TAIR:AT2G18040.1); Has 6979 Blast hits to 6709 proteins in 1619 species: Archae - 14; Bacteria - 5328; Metazoa - 276; Fungi - 185; Plants - 213; Viruses - 0; Other Eukaryotes - 963 (source: NCBI BLink). & (reliability: 274.0) & (original description: no original description) 0.8872313864952153 23 evm.model.tig00000882.25 no hits & (original description: no original description) 0.8868417938939607 69 evm.model.tig00000254.76 no hits & (original description: no original description) 0.8868225897039512 44 evm.model.tig00000194.34 no hits & (original description: no original description) 0.8828664732863315 27 evm.model.tig00020927.50 (at1g21190 : 115.0) Small nuclear ribonucleoprotein family protein; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: Small nuclear ribonucleoprotein family protein (TAIR:AT1G76860.1); Has 1267 Blast hits to 1267 proteins in 306 species: Archae - 319; Bacteria - 0; Metazoa - 370; Fungi - 215; Plants - 174; Viruses - 0; Other Eukaryotes - 189 (source: NCBI BLink). & (reliability: 230.0) & (original description: no original description) 0.8823199516498715 52 evm.model.tig00021127.195 no hits & (original description: no original description) 0.8822675364434075 55 evm.model.tig00000144.178 (at3g18430 : 121.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992); BEST Arabidopsis thaliana protein match is: calmodulin 9 (TAIR:AT3G51920.1). & (reliability: 242.0) & (original description: no original description) 0.8792975248613569 41 evm.model.tig00000037.32 (at3g08720 : 132.0) Encodes a ribosomal-protein S6 kinase. Gene expression is induced by cold and salt (NaCl). Activation of AtS6k is regulated by 1-naphthylacetic acid and kinetin, at least in part, via a lipid kinase-dependent pathway. Phosphorylates specifically mammalian and plant S6 at 25 degrees C but not at 37 degrees C. Involved in translational up-regulation of ribosomal proteins.; Arabidopsis thaliana protein kinase 19 (ATPK19); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), AGC-kinase, C-terminal (InterPro:IPR000961), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, C-terminal (InterPro:IPR017892), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: protein-serine kinase 1 (TAIR:AT3G08730.1); Has 133901 Blast hits to 131707 proteins in 4554 species: Archae - 204; Bacteria - 15943; Metazoa - 48718; Fungi - 13429; Plants - 32816; Viruses - 561; Other Eukaryotes - 22230 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 94.4) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 264.0) & (original description: no original description) 0.8782467912978085 37 evm.model.tig00021589.12 (at5g51940 : 113.0) One of two highly similar proteins that can serve as a non-catalytic subunit of nuclear DNA-dependent RNA polymerases II, IV and V; homologous to budding yeast RPB6 and the E. coli RNA polymerase omega subunit. Probably redundant with At2g04630.; NRPB6A; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription, DNA-dependent; LOCATED IN: DNA-directed RNA polymerase V complex, DNA-directed RNA polymerase II, core complex, DNA-directed RNA polymerase IV complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, 14-18kDa subunit, conserved site (InterPro:IPR020708), RNA polymerase subunit, RPB6/omega (InterPro:IPR012293), RNA polymerase Rpb6 (InterPro:IPR006110), DNA-directed RNA polymerase, 14-18kDa subunit (InterPro:IPR006111); BEST Arabidopsis thaliana protein match is: RNA polymerase Rpb6 (TAIR:AT2G04630.1); Has 907 Blast hits to 906 proteins in 313 species: Archae - 223; Bacteria - 0; Metazoa - 99; Fungi - 194; Plants - 79; Viruses - 16; Other Eukaryotes - 296 (source: NCBI BLink). & (reliability: 226.0) & (original description: no original description) 0.8773175632021061 93 evm.model.tig00000241.37 (at5g09920 : 94.0) Non-catalytic subunit specific to DNA-dependent RNA polymerase II; the ortholog of budding yeast RPB4); NRPB4; CONTAINS InterPro DOMAIN/s: HRDC-like (InterPro:IPR010997), RNA polymerase II, Rpb4 (InterPro:IPR005574), RNA polymerase II, Rpb4, core (InterPro:IPR006590); BEST Arabidopsis thaliana protein match is: RNA polymerase II, Rpb4, core protein (TAIR:AT4G15950.1); Has 441 Blast hits to 441 proteins in 181 species: Archae - 4; Bacteria - 0; Metazoa - 144; Fungi - 150; Plants - 95; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). & (reliability: 188.0) & (original description: no original description) 0.8771010865529608 69 evm.model.tig00021319.68 (at1g61780 : 93.2) postsynaptic protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Microtubule-associated protein CRIPT (InterPro:IPR019367); Has 230 Blast hits to 228 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 116; Fungi - 46; Plants - 56; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 186.4) & (original description: no original description) 0.8768174973175232 37 evm.model.tig00020918.10 no hits & (original description: no original description) 0.8756328811188909 38 evm.model.tig00000808.11 no hits & (original description: no original description) 0.8744245034939018 91 evm.model.tig00020723.11 no hits & (original description: no original description) 0.8742789309635826 41 evm.model.tig00001424.10 (at5g14100 : 123.0) member of NAP subfamily; non-intrinsic ABC protein 14 (NAP14); FUNCTIONS IN: transporter activity; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439); BEST Arabidopsis thaliana protein match is: ABC transporter family protein (TAIR:AT4G33460.1); Has 403186 Blast hits to 364909 proteins in 4058 species: Archae - 7357; Bacteria - 322932; Metazoa - 7473; Fungi - 4759; Plants - 4437; Viruses - 20; Other Eukaryotes - 56208 (source: NCBI BLink). & (reliability: 246.0) & (original description: no original description) 0.8729145060070522 42 evm.model.tig00021432.33 (at5g49400 : 98.2) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878); Has 46316 Blast hits to 20637 proteins in 1119 species: Archae - 19; Bacteria - 12274; Metazoa - 18717; Fungi - 3822; Plants - 2024; Viruses - 338; Other Eukaryotes - 9122 (source: NCBI BLink). & (reliability: 196.4) & (original description: no original description) 0.8715662628565614 70 evm.model.tig00000158.19 no hits & (original description: no original description) 0.8712837204863085 79 evm.model.tig00020563.3 no hits & (original description: no original description) 0.8697052083048505 46 evm.model.tig00000545.9 no hits & (original description: no original description) 0.8694976425099595 100 evm.model.tig00000704.54 "(at4g14540 : 106.0) ""nuclear factor Y, subunit B3"" (NF-YB3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, CBFA/NFYB, DNA topoisomerase (InterPro:IPR003957), Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072), Transcription factor, NFYB/HAP3, conserved site (InterPro:IPR003956); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit B2 (TAIR:AT5G47640.1); Has 1532 Blast hits to 1532 proteins in 250 species: Archae - 0; Bacteria - 1; Metazoa - 503; Fungi - 375; Plants - 529; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (p25209|nfyb_maize : 105.0) Nuclear transcription factor Y subunit B (NF-YB) (CAAT-box DNA-binding protein subunit B) - Zea mays (Maize) & (reliability: 212.0) & (original description: no original description)" 0.8662347039235203 83 evm.model.tig00000789.43 no hits & (original description: no original description) 0.8643844249646524 90 evm.model.tig00000796.18 no hits & (original description: no original description) 0.8626870459372606 50 evm.model.tig00020684.43 (q94de2|bd31a_orysa : 222.0) Protein BUD31 homolog 1 (Protein G10 homolog 1) - Oryza sativa (Rice) & (at4g21110 : 207.0) G10 family protein; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: G10 protein (InterPro:IPR001748), BUD31/G10-related, conserved site (InterPro:IPR018230); Has 466 Blast hits to 466 proteins in 208 species: Archae - 0; Bacteria - 0; Metazoa - 189; Fungi - 126; Plants - 80; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (reliability: 414.0) & (original description: no original description) 0.8616131263326015 80 evm.model.tig00000737.30 no hits & (original description: no original description) 0.8606454507220686 91 evm.model.tig00000655.49 (at5g19490 : 100.0) Histone superfamily protein; FUNCTIONS IN: sequence-specific DNA binding, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit C11 (TAIR:AT3G12480.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 194.2) & (original description: no original description) 0.8602096799608367 87 evm.model.tig00001249.11 no hits & (original description: no original description) 0.8602096691956264 73 evm.model.tig00000076.59 no hits & (original description: no original description) 0.8549406777270423 66 evm.model.tig00021534.1 (at3g57550 : 196.0) guanylate kinase; guanylate kinase (AGK2); CONTAINS InterPro DOMAIN/s: Guanylate kinase (InterPro:IPR008144), Guanylate kinase/L-type calcium channel (InterPro:IPR008145), Guanylate kinase, conserved site (InterPro:IPR020590), Guanylate kinase, sub-group (InterPro:IPR017665); BEST Arabidopsis thaliana protein match is: guanylate kinase 1 (TAIR:AT2G41880.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 392.0) & (original description: no original description) 0.8536082532907247 69 evm.model.tig00020538.71 (at1g17440 : 110.0) Encodes one of two Arabidopsis proteins with similarity to the TBP-associated factor TAF12. The gene product is an EIN3-interacting TFIID transcription factor required for proper ethylene response, including ERF1 induction. Loss of function mutants show enhanced response to ethylene. Located in nucleus and expressed throughout the plant. Required for ERF1 expression.; ENHANCED ETHYLENE RESPONSE 4 (EER4); FUNCTIONS IN: DNA binding, transcription initiation factor activity; INVOLVED IN: regulation of ethylene mediated signaling pathway, jasmonic acid mediated signaling pathway, transcription initiation; LOCATED IN: nucleus, transcription factor TFIID complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription initiation factor TFIID (InterPro:IPR003228), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: TBP-associated factor 12 (TAIR:AT3G10070.1); Has 83508 Blast hits to 36935 proteins in 1541 species: Archae - 40; Bacteria - 5554; Metazoa - 31214; Fungi - 9645; Plants - 6795; Viruses - 322; Other Eukaryotes - 29938 (source: NCBI BLink). & (reliability: 220.0) & (original description: no original description) 0.8532881846139939 89 evm.model.tig00000076.92 no hits & (original description: no original description) 0.8527917360647134 72 evm.model.tig00001164.22 (q39584|dyl3_chlre : 163.0) Dynein 18 kDa light chain, flagellar outer arm - Chlamydomonas reinhardtii & (at2g27030 : 95.5) encodes a calmodulin that has higher affinity to kinesin-like calmodulin binding motor protein than CAM4 or CAM6.; calmodulin 5 (CAM5); FUNCTIONS IN: calcium ion binding; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin 3 (TAIR:AT3G56800.1); Has 36011 Blast hits to 23475 proteins in 1766 species: Archae - 4; Bacteria - 234; Metazoa - 15635; Fungi - 7487; Plants - 7311; Viruses - 0; Other Eukaryotes - 5340 (source: NCBI BLink). & (reliability: 191.0) & (original description: no original description) 0.852123071264227 96 evm.model.tig00020904.76 no hits & (original description: no original description) 0.8512749666744382 91 evm.model.tig00000507.27 no hits & (original description: no original description) 0.8510193684313082 87 evm.model.tig00000342.36 no hits & (original description: no original description) 0.8505288677156553 78 evm.model.tig00022075.29 (at4g31720 : 120.0) Arabidopsis thaliana putative TBP-associated 15 kDa subunit protein (TAFII15); TBP-associated factor II 15 (TAFII15); FUNCTIONS IN: RNA polymerase II transcription factor activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: transcription initiation; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription initiation factor TFIID, 23-30kDa subunit (InterPro:IPR003923); Has 372 Blast hits to 372 proteins in 163 species: Archae - 0; Bacteria - 0; Metazoa - 153; Fungi - 132; Plants - 56; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (reliability: 240.0) & (original description: no original description) 0.8471317110675299 82 evm.model.tig00021339.23 no hits & (original description: no original description) 0.8465860646856238 83 evm.model.tig00001003.37 no hits & (original description: no original description) 0.8458183749070608 84 evm.model.tig00001224.2 (at3g27100 : 106.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, enhancer of yellow 2 (InterPro:IPR018783); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 212.0) & (original description: no original description) 0.8457632947791724 85 evm.model.tig00000073.41 no hits & (original description: no original description) 0.8427125212291955 89 evm.model.tig00021612.34 no hits & (original description: no original description) 0.8420460508414577 98 evm.model.tig00000144.34 no hits & (original description: no original description) 0.8405990404462304 91 evm.model.tig00020828.3 (at5g05080 : 200.0) ubiquitin-conjugating enzyme 22 (UBC22); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquiting-conjugating enzyme 2 (TAIR:AT2G02760.1); Has 9428 Blast hits to 9407 proteins in 388 species: Archae - 0; Bacteria - 0; Metazoa - 4145; Fungi - 1971; Plants - 1789; Viruses - 23; Other Eukaryotes - 1500 (source: NCBI BLink). & (p35130|ubc2_medsa : 93.2) Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Medicago sativa (Alfalfa) & (reliability: 400.0) & (original description: no original description) 0.8402341738882 93 evm.model.tig00000852.45 no hits & (original description: no original description) 0.838972633503673 94 evm.model.tig00021502.3 no hits & (original description: no original description) 0.8370837272248761 95 evm.model.tig00000076.116 no hits & (original description: no original description) 0.8361425882010101 98 evm.model.tig00000792.30 (at2g37680 : 141.0) CONTAINS InterPro DOMAIN/s: Vacuolar import/degradation protein Vid24 (InterPro:IPR018618); Has 318 Blast hits to 317 proteins in 131 species: Archae - 0; Bacteria - 0; Metazoa - 80; Fungi - 184; Plants - 51; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 282.0) & (original description: no original description) 0.8350355607085338 100