Sequence Description Alias PCC hrr evm.model.tig00000057.66 (at3g47730 : 380.0) member of ATH subfamily; ATP-binding cassette A2 (ABCA2); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: response to cyclopentenone; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC2 homolog 11 (TAIR:AT5G61730.1); Has 380556 Blast hits to 352092 proteins in 4023 species: Archae - 7135; Bacteria - 302205; Metazoa - 7915; Fungi - 4655; Plants - 4588; Viruses - 7; Other Eukaryotes - 54051 (source: NCBI BLink). & (reliability: 760.0) & (original description: no original description) 0.9441783381414901 4 evm.model.tig00000076.61 no hits & (original description: no original description) 0.9435212025964 6 evm.model.tig00020629.44 no hits & (original description: no original description) 0.941665300070948 5 evm.model.tig00000944.17 no hits & (original description: no original description) 0.9399791968188628 19 evm.model.tig00021435.29 no hits & (original description: no original description) 0.939902807404852 14 evm.model.tig00000254.59 (p16098|amyb_horvu : 219.0) Beta-amylase (EC 3.2.1.2) (1,4-alpha-D-glucan maltohydrolase) - Hordeum vulgare (Barley) & (at3g23920 : 208.0) Encodes a chloroplast beta-amylase. Is necessary for leaf starch breakdown in the absence of BAM3.; beta-amylase 1 (BAM1); FUNCTIONS IN: beta-amylase activity; INVOLVED IN: response to water deprivation, starch catabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 14, conserved site (InterPro:IPR018238), Glycoside hydrolase, family 14 (InterPro:IPR001554), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 14B, plant (InterPro:IPR001371), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: chloroplast beta-amylase (TAIR:AT4G17090.1); Has 845 Blast hits to 843 proteins in 168 species: Archae - 0; Bacteria - 89; Metazoa - 0; Fungi - 0; Plants - 691; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (reliability: 416.0) & (original description: no original description) 0.9389010463489547 13 evm.model.tig00000144.25 (at1g18610 : 85.5) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch repeat type 2 (InterPro:IPR011498), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G74150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 171.0) & (original description: no original description) 0.9385315606625859 12 evm.model.tig00000741.4 (at3g62150 : 432.0) P-glycoprotein 21 (PGP21); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ATP binding cassette subfamily B4 (TAIR:AT2G47000.1); Has 850676 Blast hits to 393228 proteins in 4171 species: Archae - 14744; Bacteria - 664075; Metazoa - 17906; Fungi - 12823; Plants - 9925; Viruses - 47; Other Eukaryotes - 131156 (source: NCBI BLink). & (q6yuu5|mdr_orysa : 375.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 864.0) & (original description: no original description) 0.9359928334478166 8 evm.model.tig00020629.45 no hits & (original description: no original description) 0.9318487468859197 9 evm.model.tig00020510.69 no hits & (original description: no original description) 0.930914747992349 28 evm.model.tig00020703.27 no hits & (original description: no original description) 0.9305680779034965 26 evm.model.tig00000057.67 (at3g47780 : 402.0) member of ATH subfamily; ABC2 homolog 6 (ATH6); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: response to cyclopentenone; LOCATED IN: plasma membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC2 homolog 2 (TAIR:AT3G47740.1); Has 392088 Blast hits to 359274 proteins in 4025 species: Archae - 7301; Bacteria - 309060; Metazoa - 8340; Fungi - 5303; Plants - 5008; Viruses - 16; Other Eukaryotes - 57060 (source: NCBI BLink). & (q9mun1|cysa_mesvi : 82.0) Probable sulfate/thiosulfate import ATP-binding protein cysA (EC 3.6.3.25) (Sulfate-transporting ATPase) - Mesostigma viride & (reliability: 804.0) & (original description: no original description) 0.9290869910544812 12 evm.model.tig00000254.60 no hits & (original description: no original description) 0.9282043587562613 20 evm.model.tig00000880.26 (at5g23630 : 232.0) A member of the eukaryotic type V subfamily (P5) of P-type ATPase cation pumps; MIA is most similar to the human P5 ATPase ATY2(44% identity) and to Spf1p from S. cerevisiae (41% identity). Highly abundant in the endoplasmic reticulum and small vesicles of developing pollen grains and tapetum cells. T-DNA insertional mutants of MIA suffer from imbalances in cation homeostasis and exhibit a severe reduction in fertility. Mutant microspores fail to separate from tetrads and pollen grains are fragile with an abnormal morphology and altered cell wall structure. MIA is also named PDR2 and was shown to be required for proper expression of SCARECROW (SCR), a key regulator of root patterning, and for stem-cell maintenance in Pi-deprived roots.; phosphate deficiency response 2 (PDR2); FUNCTIONS IN: cation-transporting ATPase activity; INVOLVED IN: in 6 processes; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, unknown pump specificity (type V) (InterPro:IPR006544), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: calcium ATPase 2 (TAIR:AT4G37640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 464.0) & (original description: no original description) 0.9267904215090436 14 evm.model.tig00021435.28 no hits & (original description: no original description) 0.9242613843669553 22 evm.model.tig00021234.40 no hits & (original description: no original description) 0.9239208895386931 16 evm.model.tig00000076.95 no hits & (original description: no original description) 0.9223131440601949 19 evm.model.tig00021108.33 no hits & (original description: no original description) 0.9152849330219707 18 evm.model.tig00020902.35 no hits & (original description: no original description) 0.914707728514454 19 evm.model.tig00001095.20 no hits & (original description: no original description) 0.914055428738713 20 evm.model.tig00000339.14 no hits & (original description: no original description) 0.909626931899251 33 evm.model.tig00000254.93 (at4g31600 : 139.0) UDP-N-acetylglucosamine (UAA) transporter family; INVOLVED IN: transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UAA transporter (InterPro:IPR013657); BEST Arabidopsis thaliana protein match is: Nucleotide/sugar transporter family protein (TAIR:AT4G32272.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 278.0) & (original description: no original description) 0.9060187966860941 22 evm.model.tig00021281.2 no hits & (original description: no original description) 0.9051594687384564 29 evm.model.tig00001052.14 no hits & (original description: no original description) 0.9035302861047984 35 evm.model.tig00000545.41 (at1g18640 : 195.0) Encodes a 3-phosphoserine phosphatase acting in the last step of serine biosynthesis within the chloroplast.; 3-phosphoserine phosphatase (PSP); FUNCTIONS IN: phosphoserine phosphatase activity; INVOLVED IN: L-serine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), Phosphoserine phosphatase SerB (InterPro:IPR004469), HAD-superfamily hydrolase, subfamily IB, PSPase-like (InterPro:IPR006383); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 390.0) & (original description: no original description) 0.9024306156089582 28 evm.model.tig00020964.35 (at2g32950 : 280.0) Represses photomorphogenesis and induces skotomorphogenesis in the dark. Contains a ring finger zinc-binding motif, a coiled-coil domain, and several WD-40 repeats, similar to G-beta proteins. The C-terminus has homology to TAFII80, a subunit of the TFIID component of the RNA polymerase II of Drosophila. Nuclear localization in the dark and cytoplasmic in the light.; CONSTITUTIVE PHOTOMORPHOGENIC 1 (COP1); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: SPA1-related 2 (TAIR:AT4G11110.1); Has 42218 Blast hits to 27649 proteins in 756 species: Archae - 30; Bacteria - 4454; Metazoa - 17716; Fungi - 8958; Plants - 5306; Viruses - 46; Other Eukaryotes - 5708 (source: NCBI BLink). & (p93471|cop1_pea : 276.0) E3 ubiquitin ligase protein COP1 (EC 6.3.2.-) (Constitutive photomorphogenesis protein 1) - Pisum sativum (Garden pea) & (reliability: 560.0) & (original description: no original description) 0.901877088502326 31 evm.model.tig00000789.24 no hits & (original description: no original description) 0.9018021652029067 27 evm.model.tig00000849.27 (at5g36700 : 205.0) 2-phosphoglycolate phosphatase 1 (PGLP1); FUNCTIONS IN: phosphoglycolate phosphatase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 7 plant structures; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIA (InterPro:IPR006357), 2-phosphoglycolate phosphatase, eukaryotic (InterPro:IPR006349); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT5G36790.3). & (reliability: 410.0) & (original description: no original description) 0.9010188655229004 28 evm.model.tig00000571.4 (at1g12940 : 105.0) member of High affinity nitrate transporter family; nitrate transporter2.5 (NRT2.5); FUNCTIONS IN: nitrate transmembrane transporter activity; INVOLVED IN: transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: stem, inflorescence meristem; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: nitrate transporter 2:1 (TAIR:AT1G08090.1); Has 4805 Blast hits to 4611 proteins in 1220 species: Archae - 64; Bacteria - 3952; Metazoa - 78; Fungi - 287; Plants - 251; Viruses - 0; Other Eukaryotes - 173 (source: NCBI BLink). & (reliability: 210.0) & (original description: no original description) 0.899276287311606 29 evm.model.tig00000248.35 no hits & (original description: no original description) 0.8989734823702977 33 evm.model.tig00000385.16 no hits & (original description: no original description) 0.8982102370453834 66 evm.model.tig00020610.21 no hits & (original description: no original description) 0.896651077341903 32 evm.model.tig00001110.8 (at5g67220 : 261.0) FMN-linked oxidoreductases superfamily protein; FUNCTIONS IN: tRNA dihydrouridine synthase activity, FAD binding, catalytic activity; INVOLVED IN: regulation of nitrogen utilization, oxidation reduction, tRNA processing, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), tRNA-dihydrouridine synthase (InterPro:IPR001269), tRNA-dihydrouridine synthase, conserved site (InterPro:IPR018517); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT3G49640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 522.0) & (original description: no original description) 0.8940448735066399 33 evm.model.tig00020684.50 no hits & (original description: no original description) 0.8930654484792887 34 evm.model.tig00020629.149 (at1g65070 : 234.0) DNA mismatch repair protein MutS, type 2; FUNCTIONS IN: damaged DNA binding, mismatched DNA binding, ATP binding; INVOLVED IN: mismatch repair, maintenance of fidelity involved in DNA-dependent DNA replication; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein MutS, core (InterPro:IPR007696), DNA mismatch repair protein MutS, type 2 (InterPro:IPR005747), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432), Smr protein/MutS2 C-terminal (InterPro:IPR002625); BEST Arabidopsis thaliana protein match is: DNA mismatch repair protein MutS, type 2 (TAIR:AT5G54090.1). & (reliability: 468.0) & (original description: no original description) 0.8929047586562415 74 evm.model.tig00020557.31 no hits & (original description: no original description) 0.8925087601347 36 evm.model.tig00001052.13 no hits & (original description: no original description) 0.8906761729581463 57 evm.model.tig00001187.17 (at5g52570 : 113.0) Converts β-carotene to zeaxanthin via cryptoxanthin.; beta-carotene hydroxylase 2 (BETA-OHASE 2); FUNCTIONS IN: carotene beta-ring hydroxylase activity; INVOLVED IN: xanthophyll biosynthetic process, carotene metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: beta-hydroxylase 1 (TAIR:AT4G25700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 226.0) & (original description: no original description) 0.8877202225597722 77 evm.model.tig00021234.5 (at1g51500 : 127.0) Encodes an ABC transporter involved in cuticular wax biosynthesis. Lines carrying recessive mutations in this locus have weakly glaucous stem surface, and relative elevated secondary alcohols and ketones.; ECERIFERUM 5 (CER5); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: wax biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G21090.1); Has 373832 Blast hits to 343583 proteins in 4060 species: Archae - 6936; Bacteria - 298137; Metazoa - 8223; Fungi - 6589; Plants - 5451; Viruses - 9; Other Eukaryotes - 48487 (source: NCBI BLink). & (q7fmw4|pdr15_orysa : 97.8) Pleiotropic drug resistance protein 15 - Oryza sativa (Rice) & (reliability: 254.0) & (original description: no original description) 0.8870206606578326 39 evm.model.tig00001098.6 no hits & (original description: no original description) 0.8859470433002482 40 evm.model.tig00020904.118 no hits & (original description: no original description) 0.885606158886262 41 evm.model.tig00000480.54 no hits & (original description: no original description) 0.8846900722560527 42 evm.model.tig00020603.39 (at1g64780 : 282.0) encodes an ammonium transporter protein believed to act as a high affinity transporter. It is expressed in the root, primarily in endodermal and cortical cells, and contributes to ammonium uptake in the root.; ammonium transporter 1;2 (AMT1;2); CONTAINS InterPro DOMAIN/s: Ammonium transporter (InterPro:IPR001905), Ammonium transporter, conserved site (InterPro:IPR018047); BEST Arabidopsis thaliana protein match is: ammonium transporter 1;1 (TAIR:AT4G13510.1); Has 11676 Blast hits to 11662 proteins in 2073 species: Archae - 224; Bacteria - 4692; Metazoa - 520; Fungi - 427; Plants - 507; Viruses - 0; Other Eukaryotes - 5306 (source: NCBI BLink). & (reliability: 564.0) & (original description: no original description) 0.8843463991764338 43 evm.model.tig00021489.6 no hits & (original description: no original description) 0.8842074566922182 44 evm.model.tig00000553.27 no hits & (original description: no original description) 0.8822698026275927 46 evm.model.tig00020537.46 no hits & (original description: no original description) 0.8821238338751999 59 evm.model.tig00000073.15 no hits & (original description: no original description) 0.8805080347953558 47 evm.model.tig00000980.16 (at1g07670 : 240.0) endomembrane-type CA-ATPase 4 (ECA4); FUNCTIONS IN: calcium-transporting ATPase activity; INVOLVED IN: cation transport, calcium ion transport, metabolic process, ATP biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: guard cell, callus, cultured cell; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting (InterPro:IPR005782), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068); BEST Arabidopsis thaliana protein match is: ER-type Ca2+-ATPase 1 (TAIR:AT1G07810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q2qy12|aca4_orysa : 187.0) Probable calcium-transporting ATPase 4, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 4) - Oryza sativa (Rice) & (reliability: 480.0) & (original description: no original description) 0.8804501090952945 48 evm.model.tig00000449.21 no hits & (original description: no original description) 0.8789279783516547 49 evm.model.tig00001094.32 (at5g40610 : 239.0) NAD-dependent glycerol-3-phosphate dehydrogenase family protein; FUNCTIONS IN: in 9 functions; INVOLVED IN: oxidation reduction, glycerol-3-phosphate metabolic process, glycerol-3-phosphate catabolic process, carbohydrate metabolic process, metabolic process; LOCATED IN: chloroplast, glycerol-3-phosphate dehydrogenase complex, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), NAD-dependent glycerol-3-phosphate dehydrogenase, N-terminal (InterPro:IPR011128), NAD-dependent glycerol-3-phosphate dehydrogenase (InterPro:IPR006168), NAD-dependent glycerol-3-phosphate dehydrogenase, eukaryotic (InterPro:IPR017751), NAD(P)-binding domain (InterPro:IPR016040), NAD-dependent glycerol-3-phosphate dehydrogenase, C-terminal (InterPro:IPR006109); BEST Arabidopsis thaliana protein match is: NAD-dependent glycerol-3-phosphate dehydrogenase family protein (TAIR:AT2G40690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 478.0) & (original description: no original description) 0.8788906966390889 56 evm.model.tig00000981.18 (at1g18180 : 140.0) FUNCTIONS IN: oxidoreductase activity, acting on the CH-CH group of donors; INVOLVED IN: lipid metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal (InterPro:IPR001104), Protein of unknown function DUF1295 (InterPro:IPR010721); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1295) (TAIR:AT1G73650.3); Has 2065 Blast hits to 2065 proteins in 348 species: Archae - 0; Bacteria - 501; Metazoa - 79; Fungi - 152; Plants - 110; Viruses - 0; Other Eukaryotes - 1223 (source: NCBI BLink). & (reliability: 280.0) & (original description: no original description) 0.878736645405292 97 evm.model.tig00000882.11 no hits & (original description: no original description) 0.8779284469456548 52 evm.model.tig00000403.56 no hits & (original description: no original description) 0.8777274312699639 53 evm.model.tig00000480.51 (at5g17660 : 112.0) tRNA (guanine-N-7) methyltransferase; FUNCTIONS IN: tRNA (guanine-N7-)-methyltransferase activity; INVOLVED IN: tRNA modification; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA (guanine-N-7) methyltransferase (InterPro:IPR003358); BEST Arabidopsis thaliana protein match is: tRNA (guanine-N-7) methyltransferase (TAIR:AT5G24840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 224.0) & (original description: no original description) 0.8772864419032549 78 evm.model.tig00000204.70 no hits & (original description: no original description) 0.8765466615940702 69 evm.model.tig00020560.17 no hits & (original description: no original description) 0.8742493908530563 57 evm.model.tig00001307.9 (p48642|gshrc_orysa : 291.0) Glutathione reductase, cytosolic (EC 1.8.1.7) (GR) (GRase) - Oryza sativa (Rice) & (at3g24170 : 280.0) Encodes a cytosolic glutathione reductase.; glutathione-disulfide reductase (GR1); FUNCTIONS IN: NADP or NADPH binding, glutathione-disulfide reductase activity, oxidoreductase activity, FAD binding; INVOLVED IN: oxidation reduction, glutathione metabolic process, cell redox homeostasis; LOCATED IN: peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, class I, active site (InterPro:IPR012999), Pyridine nucleotide-disulphide oxidoreductase, dimerisation (InterPro:IPR004099), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Mercuric reductase (InterPro:IPR000815), Glutathione-disulphide reductase (InterPro:IPR006324), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: glutathione reductase (TAIR:AT3G54660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 560.0) & (original description: no original description) 0.8732568325963947 58 evm.model.tig00000140.2 no hits & (original description: no original description) 0.8721071617865258 63 evm.model.tig00001177.10 (p39867|nia1_brana : 574.0) Nitrate reductase [NADH], clone PBNBR1405 (EC 1.7.1.1) (NR) - Brassica napus (Rape) & (at1g77760 : 566.0) Encodes the cytosolic minor isoform of nitrate reductase (NR). Involved in the first step of nitrate assimilation, it contributes about 15% of the nitrate reductase activity in shoots. Similar to molybdopterin oxidoreductases at the N-terminus, and to FAD/NAD-binding cytochrome reductases at the C-terminus. Cofactors: FAD, heme iron (cytochrome B-557), and molybdenum-pterin.; nitrate reductase 1 (NIA1); FUNCTIONS IN: nitrate reductase activity, protein binding; INVOLVED IN: nitric oxide biosynthetic process, nitrate assimilation, response to light stimulus; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b5, heme-binding site (InterPro:IPR018506), Nitrate reductase NADH dependent (InterPro:IPR012137), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Oxidoreductase, FAD-binding domain (InterPro:IPR008333), Immunoglobulin E-set (InterPro:IPR014756), Cytochrome b5 (InterPro:IPR001199), NADH:cytochrome b5 reductase (CBR) (InterPro:IPR001834), Oxidoreductase, molybdopterin-binding domain (InterPro:IPR000572), Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Oxidoreductase, molybdopterin binding site (InterPro:IPR022407), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Eukaryotic molybdopterin oxidoreductase (InterPro:IPR008335), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), Moybdenum cofactor oxidoreductase, dimerisation (InterPro:IPR005066); BEST Arabidopsis thaliana protein match is: nitrate reductase 2 (TAIR:AT1G37130.1); Has 14813 Blast hits to 14437 proteins in 2198 species: Archae - 168; Bacteria - 6976; Metazoa - 1728; Fungi - 2215; Plants - 1479; Viruses - 3; Other Eukaryotes - 2244 (source: NCBI BLink). & (reliability: 1132.0) & (original description: no original description) 0.8718654842663247 65 evm.model.tig00021318.45 (at4g35360 : 240.0) Uncharacterised conserved protein (UCP030210); CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF89 (InterPro:IPR002791), Uncharacterised conserved protein UCP030210 (InterPro:IPR016949); BEST Arabidopsis thaliana protein match is: Uncharacterised conserved protein (UCP030210) (TAIR:AT2G17340.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 480.0) & (original description: no original description) 0.871633464920644 61 evm.model.tig00000144.124 (p34811|efgc_soybn : 155.0) Elongation factor G, chloroplast precursor (EF-G) - Glycine max (Soybean) & (at1g62750 : 154.0) Nuclear encoded protein consists of the five domains conserved in EF-G proteins, with two GTP-binding sites in the first domain, and an additional transit peptide at the N-terminus. Localized in chloroplasts. Point mutation results in a delay in the onset of germination. At early developmental stage embryos still contain undifferentiated proplastids. The greening of cotyledons is severely impaired in light-grown mutant sco1 seedlings, whereas the following true leaves develop normally as in wild-type plants.; SNOWY COTYLEDON 1 (SCO1); FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, translation elongation factor activity, ATP binding; INVOLVED IN: post-embryonic development, chloroplast organization, seed germination; LOCATED IN: mitochondrion, apoplast, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation factor EFG/EF2, domain IV (InterPro:IPR005517), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFG/EF2 (InterPro:IPR004540), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation elongation factor EFG/EF2 protein (TAIR:AT2G45030.1); Has 79823 Blast hits to 67706 proteins in 7071 species: Archae - 929; Bacteria - 47320; Metazoa - 4453; Fungi - 5428; Plants - 1613; Viruses - 3; Other Eukaryotes - 20077 (source: NCBI BLink). & (reliability: 308.0) & (original description: no original description) 0.8697525213345392 90 evm.model.tig00000553.5 no hits & (original description: no original description) 0.868542290525939 63 evm.model.tig00000806.53 (at1g54220 : 333.0) Dihydrolipoamide acetyltransferase, long form protein; FUNCTIONS IN: dihydrolipoyllysine-residue acetyltransferase activity, acyltransferase activity; INVOLVED IN: pyruvate metabolic process, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Dihydrolipoamide acetyltransferase, long form (InterPro:IPR006257), E3 binding (InterPro:IPR004167), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: Dihydrolipoamide acetyltransferase, long form protein (TAIR:AT3G13930.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 666.0) & (original description: no original description) 0.8683928673497271 93 evm.model.tig00000498.20 no hits & (original description: no original description) 0.8681720883449116 66 evm.model.tig00000655.57 (at3g10350 : 103.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATP binding; INVOLVED IN: cellular metal ion homeostasis, anion transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, anion-transporting (InterPro:IPR003348); BEST Arabidopsis thaliana protein match is: Anion-transporting ATPase (TAIR:AT5G60730.1). & (reliability: 206.0) & (original description: no original description) 0.867392387089862 71 evm.model.tig00000147.24 (at1g15500 : 427.0) ATNTT2; FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, chloroplast envelope, cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: nucleotide transporter 1 (TAIR:AT1G80300.1); Has 767 Blast hits to 762 proteins in 173 species: Archae - 0; Bacteria - 466; Metazoa - 8; Fungi - 28; Plants - 101; Viruses - 0; Other Eukaryotes - 164 (source: NCBI BLink). & (o24381|tlc1_soltu : 424.0) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (reliability: 854.0) & (original description: no original description) 0.8671937299861043 68 evm.model.tig00001160.14 (at5g58240 : 139.0) Encodes a Fhit protein. Has nucleoside phosphoramidase and adenylylsulfatase activities.; FRAGILE HISTIDINE TRIAD (FHIT); CONTAINS InterPro DOMAIN/s: Histidine triad-like motif (InterPro:IPR011146), Histidine triad, conserved site (InterPro:IPR019808), Histidine triad (HIT) protein (InterPro:IPR001310), Histidine triad motif (InterPro:IPR011151); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 278.0) & (original description: no original description) 0.8669305730410474 84 evm.model.tig00000204.78 no hits & (original description: no original description) 0.8666687040682339 70 evm.model.tig00000227.42 no hits & (original description: no original description) 0.8633250547083601 73 evm.model.tig00000663.35 no hits & (original description: no original description) 0.8632063242999656 74 evm.model.tig00001371.13 (p29409|pgkh_spiol : 275.0) Phosphoglycerate kinase, chloroplast precursor (EC 2.7.2.3) (Fragment) - Spinacia oleracea (Spinach) & (at1g56190 : 265.0) Phosphoglycerate kinase family protein; FUNCTIONS IN: phosphoglycerate kinase activity; INVOLVED IN: glycolysis; LOCATED IN: thylakoid, mitochondrion, chloroplast, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoglycerate kinase, N-terminal (InterPro:IPR015824), Phosphoglycerate kinase (InterPro:IPR001576), Phosphoglycerate kinase, C-terminal (InterPro:IPR015901), Phosphoglycerate kinase, conserved site (InterPro:IPR015911); BEST Arabidopsis thaliana protein match is: phosphoglycerate kinase 1 (TAIR:AT3G12780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 530.0) & (original description: no original description) 0.8630245911777501 75 evm.model.tig00000241.108 (at1g17280 : 149.0) ubiquitin-conjugating enzyme 34 (UBC34); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 33 (TAIR:AT5G50430.2); Has 7599 Blast hits to 7596 proteins in 375 species: Archae - 0; Bacteria - 0; Metazoa - 3285; Fungi - 1587; Plants - 1489; Viruses - 20; Other Eukaryotes - 1218 (source: NCBI BLink). & (reliability: 290.0) & (original description: no original description) 0.8629831363427688 76 evm.model.tig00000900.30 no hits & (original description: no original description) 0.8622646409141698 78 evm.model.tig00000042.12 no hits & (original description: no original description) 0.8618391889098914 79 evm.model.tig00000385.30 no hits & (original description: no original description) 0.861252243933572 88 evm.model.tig00021179.47 no hits & (original description: no original description) 0.8601448685516684 83 evm.model.tig00000826.16 no hits & (original description: no original description) 0.8584186745343558 84 evm.model.tig00001094.13 (at3g18290 : 278.0) Encodes BRUTUS (BTS), a putative E3 ligase protein with metal ion binding and DNA binding domains, which negatively regulates the response to iron deficiency.; BRUTUS (BTS); FUNCTIONS IN: zinc ion binding; INVOLVED IN: cellular response to iron ion starvation, embryo development ending in seed dormancy; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CTCHY-type (InterPro:IPR017921), Zinc finger, CHY-type (InterPro:IPR008913), Zinc finger, RING-type (InterPro:IPR001841), Haemerythrin/HHE cation-binding motif (InterPro:IPR012312); BEST Arabidopsis thaliana protein match is: zinc ion binding (TAIR:AT1G74770.1); Has 1787 Blast hits to 1677 proteins in 200 species: Archae - 0; Bacteria - 15; Metazoa - 641; Fungi - 164; Plants - 725; Viruses - 2; Other Eukaryotes - 240 (source: NCBI BLink). & (reliability: 556.0) & (original description: no original description) 0.8581106251085941 85 evm.model.tig00021517.6 (at3g58760 : 81.3) Integrin-linked protein kinase family; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: regulation of signal transduction, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Integrin-linked protein kinase (InterPro:IPR016253), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Ankyrin repeat-containing domain (InterPro:IPR020683), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Integrin-linked protein kinase family (TAIR:AT4G18950.1); Has 165609 Blast hits to 134537 proteins in 4793 species: Archae - 244; Bacteria - 16399; Metazoa - 69591; Fungi - 13531; Plants - 33415; Viruses - 845; Other Eukaryotes - 31584 (source: NCBI BLink). & (reliability: 162.6) & (original description: no original description) 0.8571615780519805 87 evm.model.tig00001001.1 no hits & (original description: no original description) 0.8562469422630736 88 evm.model.tig00021621.16 no hits & (original description: no original description) 0.8560883637672742 90 evm.model.tig00021462.2 (at5g53140 : 137.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT5G10740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 274.0) & (original description: no original description) 0.8540804101608853 91 evm.model.tig00000169.7 no hits & (original description: no original description) 0.8536128089174972 92 evm.model.tig00021108.8 (at1g12940 : 148.0) member of High affinity nitrate transporter family; nitrate transporter2.5 (NRT2.5); FUNCTIONS IN: nitrate transmembrane transporter activity; INVOLVED IN: transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: stem, inflorescence meristem; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: nitrate transporter 2:1 (TAIR:AT1G08090.1); Has 4805 Blast hits to 4611 proteins in 1220 species: Archae - 64; Bacteria - 3952; Metazoa - 78; Fungi - 287; Plants - 251; Viruses - 0; Other Eukaryotes - 173 (source: NCBI BLink). & (reliability: 296.0) & (original description: no original description) 0.8511537722242016 94 evm.model.tig00001127.9 no hits & (original description: no original description) 0.8510943817149764 95 evm.model.tig00001177.11 (at1g12940 : 295.0) member of High affinity nitrate transporter family; nitrate transporter2.5 (NRT2.5); FUNCTIONS IN: nitrate transmembrane transporter activity; INVOLVED IN: transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: stem, inflorescence meristem; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: nitrate transporter 2:1 (TAIR:AT1G08090.1); Has 4805 Blast hits to 4611 proteins in 1220 species: Archae - 64; Bacteria - 3952; Metazoa - 78; Fungi - 287; Plants - 251; Viruses - 0; Other Eukaryotes - 173 (source: NCBI BLink). & (reliability: 590.0) & (original description: no original description) 0.8508624311237308 96 evm.model.tig00021435.16 (at4g08690 : 154.0) Sec14p-like phosphatidylinositol transfer family protein; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT1G22180.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 308.0) & (original description: no original description) 0.8501791928908041 97 evm.model.tig00020685.31 (at5g06530 : 184.0) ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G52310.1); Has 401964 Blast hits to 364471 proteins in 4136 species: Archae - 7187; Bacteria - 315702; Metazoa - 9377; Fungi - 6648; Plants - 5639; Viruses - 7; Other Eukaryotes - 57404 (source: NCBI BLink). & (q7fmw4|pdr15_orysa : 139.0) Pleiotropic drug resistance protein 15 - Oryza sativa (Rice) & (reliability: 368.0) & (original description: no original description) 0.850113043490462 98 evm.model.tig00000246.25 no hits & (original description: no original description) 0.8499986561282318 99 evm.model.tig00000076.42 no hits & (original description: no original description) 0.8497625519105907 100