Sequence Description Alias PCC hrr evm.model.tig00021312.5 no hits & (original description: no original description) 0.9551711813610431 4 evm.model.tig00020930.11 no hits & (original description: no original description) 0.9523189312245883 3 evm.model.tig00000498.49 no hits & (original description: no original description) 0.9511445089544085 3 evm.model.tig00021435.6 no hits & (original description: no original description) 0.9483604418781368 4 evm.model.tig00020725.6 no hits & (original description: no original description) 0.946180954930601 5 evm.model.tig00020556.84 no hits & (original description: no original description) 0.942479753081255 6 evm.model.tig00000760.21 no hits & (original description: no original description) 0.9417208876954908 7 evm.model.tig00001416.9 no hits & (original description: no original description) 0.9416208731971449 8 evm.model.tig00020800.28 (at5g66005 : 95.5) Expressed protein; FUNCTIONS IN: nucleoside-triphosphatase activity, transferase activity, nucleotide binding, ATP binding; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF265 (InterPro:IPR004948), ATPase, AAA+ type, core (InterPro:IPR003593); Has 418 Blast hits to 418 proteins in 173 species: Archae - 141; Bacteria - 87; Metazoa - 103; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (reliability: 191.0) & (original description: no original description) 0.9415264528941998 31 evm.model.tig00000865.59 (at3g20540 : 295.0) polymerase gamma 1 (POLGAMMA1); FUNCTIONS IN: 3'-5' exonuclease activity, DNA-directed DNA polymerase activity, DNA binding, nucleic acid binding; INVOLVED IN: DNA replication, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: male gametophyte; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), DNA-directed DNA polymerase, family A, palm domain (InterPro:IPR001098), DNA polymerase A domain (InterPro:IPR002298), 3'-5' exonuclease (InterPro:IPR002562); BEST Arabidopsis thaliana protein match is: polymerase gamma 2 (TAIR:AT1G50840.1). & (reliability: 590.0) & (original description: no original description) 0.9411967502887195 10 evm.model.tig00000385.25 no hits & (original description: no original description) 0.9403064301699389 11 evm.model.tig00020660.65 no hits & (original description: no original description) 0.9386109056763455 12 evm.model.tig00000880.15 no hits & (original description: no original description) 0.9378587990300439 13 evm.model.tig00000553.42 no hits & (original description: no original description) 0.9373592764100463 20 evm.model.tig00000331.11 no hits & (original description: no original description) 0.9366834383924783 15 evm.model.tig00020943.39 no hits & (original description: no original description) 0.9353749190403056 16 evm.model.tig00000144.26 no hits & (original description: no original description) 0.9353304011855051 17 evm.model.tig00020553.250 no hits & (original description: no original description) 0.9347619389417832 18 evm.model.tig00000241.99 no hits & (original description: no original description) 0.9346683041948265 28 evm.model.tig00000789.29 no hits & (original description: no original description) 0.9343684603063329 20 evm.model.tig00001368.6 no hits & (original description: no original description) 0.9329715445619107 21 evm.model.tig00000093.231 no hits & (original description: no original description) 0.9328876567046762 22 evm.model.tig00000451.7 no hits & (original description: no original description) 0.9327377871131158 44 evm.model.tig00020911.50 no hits & (original description: no original description) 0.932489289255212 24 evm.model.tig00000981.14 (at2g36390 : 474.0) Encodes a starch branching enzyme (EC.2.4.1.18) similar to SBE2 from maize and rice. Expressed throughout plant tissues.; starch branching enzyme 2.1 (SBE2.1); FUNCTIONS IN: 1,4-alpha-glucan branching enzyme activity; INVOLVED IN: amylopectin biosynthetic process, starch metabolic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 13, N-terminal (InterPro:IPR004193), Immunoglobulin E-set (InterPro:IPR014756), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Alpha-amylase, C-terminal all beta (InterPro:IPR006048), Immunoglobulin-like fold (InterPro:IPR013783), Glycosyl hydrolase, family 13, all-beta (InterPro:IPR013780), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047); BEST Arabidopsis thaliana protein match is: starch branching enzyme 2.2 (TAIR:AT5G03650.1); Has 15972 Blast hits to 15848 proteins in 2360 species: Archae - 125; Bacteria - 12355; Metazoa - 437; Fungi - 446; Plants - 1422; Viruses - 0; Other Eukaryotes - 1187 (source: NCBI BLink). & (q08047|glgb_maize : 404.0) 1,4-alpha-glucan branching enzyme IIB, chloroplast precursor (EC 2.4.1.18) (Starch branching enzyme IIB) (Q-enzyme) - Zea mays (Maize) & (reliability: 948.0) & (original description: no original description) 0.9323939297280082 27 evm.model.tig00001490.5 no hits & (original description: no original description) 0.931181656021497 26 evm.model.tig00001215.4 no hits & (original description: no original description) 0.9301930770908278 27 evm.model.tig00001003.9 no hits & (original description: no original description) 0.9283010589413245 28 evm.model.tig00020510.112 no hits & (original description: no original description) 0.927993605133555 29 evm.model.tig00020848.33 no hits & (original description: no original description) 0.9274836742032996 30 evm.model.tig00020510.94 no hits & (original description: no original description) 0.9268450023227662 31 evm.model.tig00000237.2 no hits & (original description: no original description) 0.9264082949140171 32 evm.model.tig00001208.7 no hits & (original description: no original description) 0.9263356217163299 39 evm.model.tig00000984.22 (at5g20150 : 102.0) SPX domain gene 1 (SPX1); CONTAINS InterPro DOMAIN/s: SPX, N-terminal (InterPro:IPR004331); BEST Arabidopsis thaliana protein match is: SPX domain gene 2 (TAIR:AT2G26660.1); Has 1126 Blast hits to 1124 proteins in 197 species: Archae - 3; Bacteria - 7; Metazoa - 241; Fungi - 471; Plants - 313; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (reliability: 204.0) & (original description: no original description) 0.9255522631537216 67 evm.model.tig00001086.35 no hits & (original description: no original description) 0.9251576894672636 35 evm.model.tig00001388.14 no hits & (original description: no original description) 0.9246978199275355 36 evm.model.tig00021127.15 (at2g39020 : 83.2) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT2G39030.1); Has 2080 Blast hits to 2079 proteins in 734 species: Archae - 26; Bacteria - 1286; Metazoa - 282; Fungi - 96; Plants - 61; Viruses - 0; Other Eukaryotes - 329 (source: NCBI BLink). & (reliability: 166.4) & (original description: no original description) 0.923849881432688 37 evm.model.tig00020713.11 (at1g63250 : 218.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT2G07750.1); Has 39480 Blast hits to 38845 proteins in 2963 species: Archae - 566; Bacteria - 19506; Metazoa - 5817; Fungi - 4606; Plants - 2531; Viruses - 8; Other Eukaryotes - 6446 (source: NCBI BLink). & (q41382|rh7_spiol : 123.0) DEAD-box ATP-dependent RNA helicase 7 (EC 3.6.1.-) - Spinacia oleracea (Spinach) & (reliability: 436.0) & (original description: no original description) 0.9234556270822044 91 evm.model.tig00000842.24 no hits & (original description: no original description) 0.9230894405446423 39 evm.model.tig00021521.22 no hits & (original description: no original description) 0.923029523520755 40 evm.model.tig00020723.30 no hits & (original description: no original description) 0.9226983103032607 88 evm.model.tig00020710.50 no hits & (original description: no original description) 0.9226416703535315 42 evm.model.tig00000571.1 no hits & (original description: no original description) 0.922059608032066 43 evm.model.tig00000310.64 no hits & (original description: no original description) 0.9218428722677061 44 evm.model.tig00000241.8 no hits & (original description: no original description) 0.9217940731508658 61 evm.model.tig00021464.21 (at3g18290 : 349.0) Encodes BRUTUS (BTS), a putative E3 ligase protein with metal ion binding and DNA binding domains, which negatively regulates the response to iron deficiency.; BRUTUS (BTS); FUNCTIONS IN: zinc ion binding; INVOLVED IN: cellular response to iron ion starvation, embryo development ending in seed dormancy; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CTCHY-type (InterPro:IPR017921), Zinc finger, CHY-type (InterPro:IPR008913), Zinc finger, RING-type (InterPro:IPR001841), Haemerythrin/HHE cation-binding motif (InterPro:IPR012312); BEST Arabidopsis thaliana protein match is: zinc ion binding (TAIR:AT1G74770.1); Has 1787 Blast hits to 1677 proteins in 200 species: Archae - 0; Bacteria - 15; Metazoa - 641; Fungi - 164; Plants - 725; Viruses - 2; Other Eukaryotes - 240 (source: NCBI BLink). & (reliability: 698.0) & (original description: no original description) 0.9216364559755731 46 evm.model.tig00020554.81 no hits & (original description: no original description) 0.921488617752376 51 evm.model.tig00000241.3 no hits & (original description: no original description) 0.921078153233517 48 evm.model.tig00021035.20 no hits & (original description: no original description) 0.9209149985827105 49 evm.model.tig00021275.5 no hits & (original description: no original description) 0.9198749707639476 51 evm.model.tig00021179.8 no hits & (original description: no original description) 0.9195220813668927 52 evm.model.tig00001024.29 no hits & (original description: no original description) 0.9194609843860496 53 evm.model.tig00020723.74 no hits & (original description: no original description) 0.9192861844574133 66 evm.model.tig00001003.5 no hits & (original description: no original description) 0.9182923364905753 55 evm.model.tig00021127.174 no hits & (original description: no original description) 0.917409145199757 56 evm.model.tig00001071.10 no hits & (original description: no original description) 0.9171157823168643 94 evm.model.tig00000655.65 (at5g05130 : 110.0) DNA/RNA helicase protein; FUNCTIONS IN: in 6 functions; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), HIP116, Rad5p N-terminal (InterPro:IPR014905), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: DNA/RNA helicase protein (TAIR:AT5G22750.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 220.0) & (original description: no original description) 0.9169879703191471 59 evm.model.tig00000293.23 no hits & (original description: no original description) 0.9166046289330954 60 evm.model.tig00000769.11 no hits & (original description: no original description) 0.9160681016517584 61 evm.model.tig00020710.71 no hits & (original description: no original description) 0.9153306059624202 62 evm.model.tig00000912.42 no hits & (original description: no original description) 0.9140707881522975 67 evm.model.tig00020537.33 no hits & (original description: no original description) 0.9138190850321558 65 evm.model.tig00000626.7 no hits & (original description: no original description) 0.9136564983102388 66 evm.model.tig00000788.3 no hits & (original description: no original description) 0.9135874682850976 94 evm.model.tig00000792.68 no hits & (original description: no original description) 0.9134995407607638 68 evm.model.tig00000241.110 no hits & (original description: no original description) 0.913435736193846 70 evm.model.tig00021493.32 (at5g60230 : 88.2) putative subunit of tRNA splicing endonuclease; splicing endonuclease 2 (SEN2); CONTAINS InterPro DOMAIN/s: tRNA intron endonuclease, catalytic domain-like (InterPro:IPR006677), tRNA-intron endonuclease (InterPro:IPR006676), Endonuclease TnsA, N-terminal/resolvase Hjc/tRNA endonuclease, C-terminal (InterPro:IPR011856), tRNA intron endonuclease, N-terminal (InterPro:IPR006678); BEST Arabidopsis thaliana protein match is: splicing endonuclease 1 (TAIR:AT3G45590.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q5z6b1|sen2_orysa : 84.7) Probable tRNA-splicing endonuclease subunit Sen2 (EC 3.1.27.9) (tRNA-intron endonuclease Sen2) - Oryza sativa (Rice) & (reliability: 176.4) & (original description: no original description) 0.9127672808068544 72 evm.model.tig00000383.57 (at5g10630 : 146.0) Translation elongation factor EF1A/initiation factor IF2gamma family protein; FUNCTIONS IN: GTP binding, translation elongation factor activity, GTPase activity, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Zinc finger, RanBP2-type (InterPro:IPR001876), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation elongation factor EF1A/initiation factor IF2gamma family protein (TAIR:AT1G18070.2). & (q41803|ef1a_maize : 140.0) Elongation factor 1-alpha (EF-1-alpha) - Zea mays (Maize) & (reliability: 292.0) & (original description: no original description) 0.912418687744272 73 evm.model.tig00020746.18 (at3g09660 : 157.0) minichromosome maintenance 8 (MCM8); FUNCTIONS IN: nucleoside-triphosphatase activity, DNA-dependent ATPase activity, DNA binding, nucleotide binding, ATP binding; INVOLVED IN: DNA-dependent DNA replication initiation, DNA replication; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), ATPase, AAA+ type, core (InterPro:IPR003593), DNA-dependent ATPase MCM (InterPro:IPR001208); BEST Arabidopsis thaliana protein match is: Minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT2G16440.1); Has 4027 Blast hits to 3851 proteins in 539 species: Archae - 371; Bacteria - 134; Metazoa - 1249; Fungi - 930; Plants - 423; Viruses - 3; Other Eukaryotes - 917 (source: NCBI BLink). & (q43704|mcm3_maize : 118.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 314.0) & (original description: no original description) 0.9122896629881588 74 evm.model.tig00001224.24 no hits & (original description: no original description) 0.9115647128517487 75 evm.model.tig00000215.55 no hits & (original description: no original description) 0.9112218649009213 80 evm.model.tig00000203.26 no hits & (original description: no original description) 0.9110981468160255 77 evm.model.tig00020723.33 no hits & (original description: no original description) 0.9109801275621422 78 evm.model.tig00000821.58 no hits & (original description: no original description) 0.9108423322793348 79 evm.model.tig00000093.204 no hits & (original description: no original description) 0.9100260192957782 81 evm.model.tig00020614.121 no hits & (original description: no original description) 0.9097257122220447 82 evm.model.tig00000718.75 no hits & (original description: no original description) 0.9092951248395852 83 evm.model.tig00000711.38 no hits & (original description: no original description) 0.9091858277287134 84 evm.model.tig00000361.59 no hits & (original description: no original description) 0.9091837216329245 85 evm.model.tig00020961.49 no hits & (original description: no original description) 0.9090203416315039 86 evm.model.tig00000241.126 no hits & (original description: no original description) 0.9089508978369668 94 evm.model.tig00001336.20 no hits & (original description: no original description) 0.9088925108770951 94 evm.model.tig00000803.5 no hits & (original description: no original description) 0.9087674678580084 89 evm.model.tig00000711.49 (at4g32700 : 104.0) Encodes a homolog of Drosophila MUS308 and mammalian DNA polymerase, which prevent spontaneous or DNA damage-induced production of DNA double strand breaks. Two conserved functional domains: an N-terminal superfamily II DNA/RNA helicase domain and a C-terminal prokaryotic-type DNA polymerase I domain. Required for regulated cell division and differentiation in meristems. Mutant plants show morphological defects, such as short roots, serrated leaves, and fasciation, as well as defective patterns of cell division and differentiation in the meristem. Mutant plants had 2.5 to 4.5-fold higher expression of ATGR1, ATBRCA1 and RAD51 genes. TEB is required for normal progression of DNA replication and for correct expression of genes during development.; helicases;ATP-dependent helicases;nucleic acid binding;ATP binding;DNA-directed DNA polymerases;DNA binding; FUNCTIONS IN: in 6 functions; INVOLVED IN: regulation of gene expression, DNA replication, DNA recombination, photomorphogenesis; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA-directed DNA polymerase, family A, palm domain (InterPro:IPR001098), DNA/RNA helicase, C-terminal (InterPro:IPR001650), DNA polymerase A domain (InterPro:IPR002298), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: U5 small nuclear ribonucleoprotein helicase (TAIR:AT2G42270.1); Has 17628 Blast hits to 16579 proteins in 2941 species: Archae - 600; Bacteria - 7507; Metazoa - 1254; Fungi - 1190; Plants - 590; Viruses - 412; Other Eukaryotes - 6075 (source: NCBI BLink). & (reliability: 208.0) & (original description: no original description) 0.9086377019516632 91 evm.model.tig00000147.51 no hits & (original description: no original description) 0.9082252606216304 92 evm.model.tig00021319.13 no hits & (original description: no original description) 0.9075778727769968 95 evm.model.tig00020553.72 no hits & (original description: no original description) 0.907427560057526 96 evm.model.tig00000808.22 no hits & (original description: no original description) 0.907189522821922 97 evm.model.tig00021373.13 no hits & (original description: no original description) 0.9070955904954855 98