Sequence Description Alias PCC hrr evm.model.tig00001264.28 (at1g49760 : 371.0) polyadenylate-binding protein, putative / PABP, putative, similar to poly(A)-binding protein GB:AAF66825 GI:7673359 from (Nicotiana tabacum). Highly and ubiquitously expressed. Member of the class II PABP family.; poly(A) binding protein 8 (PAB8); CONTAINS InterPro DOMAIN/s: Polyadenylate-binding protein/Hyperplastic disc protein (InterPro:IPR002004), RNA recognition motif, RNP-1 (InterPro:IPR000504), Polyadenylate binding protein, human types 1, 2, 3, 4 (InterPro:IPR006515), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: poly(A) binding protein 2 (TAIR:AT4G34110.1). & (q08935|roc1_nicsy : 89.7) 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A) - Nicotiana sylvestris (Wood tobacco) & (reliability: 742.0) & (original description: no original description) 0.9403476747250327 4 evm.model.tig00000123.5 no hits & (original description: no original description) 0.9352008072937892 2 evm.model.tig00000254.118 no hits & (original description: no original description) 0.932007706751104 22 evm.model.tig00001574.11 no hits & (original description: no original description) 0.9316465044086951 4 evm.model.tig00021489.57 no hits & (original description: no original description) 0.9307612581001649 5 evm.model.tig00001130.13 no hits & (original description: no original description) 0.9294631198367503 6 evm.model.tig00021612.61 no hits & (original description: no original description) 0.9276466836262814 10 evm.model.tig00020710.11 no hits & (original description: no original description) 0.9245054726429534 8 evm.model.tig00021070.97 no hits & (original description: no original description) 0.9223101331680331 15 evm.model.tig00020909.60 no hits & (original description: no original description) 0.9193371070152867 10 evm.model.tig00021463.6 no hits & (original description: no original description) 0.9190486885017807 35 evm.model.tig00021489.55 no hits & (original description: no original description) 0.9165638548882271 12 evm.model.tig00000229.3 (at5g66010 : 115.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G20890.1). & (reliability: 230.0) & (original description: no original description) 0.9149917196647973 65 evm.model.tig00020562.24 (at1g27320 : 112.0) Encodes a histidine kinases, a cytokinin receptor that controls cytokinin-mediated leaf longevity through a specific phosphorylation of the response regulator, ARR2.; histidine kinase 3 (HK3); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 2 (TAIR:AT5G35750.1); Has 124308 Blast hits to 110912 proteins in 3043 species: Archae - 772; Bacteria - 110408; Metazoa - 31; Fungi - 2185; Plants - 2022; Viruses - 28; Other Eukaryotes - 8862 (source: NCBI BLink). & (q9m7m1|etr1_prupe : 102.0) Ethylene receptor (EC 2.7.13.3) - Prunus persica (Peach) & (reliability: 224.0) & (original description: no original description) 0.9137702848563609 42 evm.model.tig00021489.58 no hits & (original description: no original description) 0.9127727411893137 41 evm.model.tig00020516.17 no hits & (original description: no original description) 0.9118564626853157 43 evm.model.tig00001067.1 no hits & (original description: no original description) 0.9098591151231701 20 evm.model.tig00000339.25 (at1g08600 : 146.0) ATRX; FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: homolog of RAD54 (TAIR:AT3G19210.1). & (q7g8y3|isw2_orysa : 88.6) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 292.0) & (original description: no original description) 0.9089979007327024 33 evm.model.tig00000157.45 no hits & (original description: no original description) 0.9084171701274277 19 evm.model.tig00021290.7 no hits & (original description: no original description) 0.9058982941627942 71 evm.model.tig00000190.24 no hits & (original description: no original description) 0.9055627275638549 21 evm.model.tig00000949.20 no hits & (original description: no original description) 0.9055058630356317 32 evm.model.tig00000430.4 no hits & (original description: no original description) 0.9054105819367387 45 evm.model.tig00020964.29 no hits & (original description: no original description) 0.9050665257481726 24 evm.model.tig00021037.68 (at1g26240 : 107.0) Proline-rich extensin-like family protein; FUNCTIONS IN: structural constituent of cell wall; INVOLVED IN: plant-type cell wall organization; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Extensin-like repeat (InterPro:IPR006706); BEST Arabidopsis thaliana protein match is: Proline-rich extensin-like family protein (TAIR:AT4G08370.1); Has 364257 Blast hits to 37887 proteins in 1520 species: Archae - 1099; Bacteria - 63371; Metazoa - 128573; Fungi - 46566; Plants - 64812; Viruses - 9875; Other Eukaryotes - 49961 (source: NCBI BLink). & (q9fpq6|gp1_chlre : 101.0) Vegetative cell wall protein gp1 precursor (Hydroxyproline-rich glycoprotein 1) - Chlamydomonas reinhardtii & (reliability: 192.6) & (original description: no original description) 0.9046674120036452 38 evm.model.tig00021501.3 no hits & (original description: no original description) 0.9035858375624035 26 evm.model.tig00020603.82 no hits & (original description: no original description) 0.903359934161226 27 evm.model.tig00020629.69 (at5g25150 : 80.1) Encodes a putative TATA-binding-protein associated factor TAF5. TAFs are subunits of the general transcription factor IID (TFIID).; TBP-associated factor 5 (TAF5); FUNCTIONS IN: transcription regulator activity, nucleotide binding; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: guard cell, root, inflorescence, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781), TFIID subunit, WD40-associated region (InterPro:IPR007582); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 114463 Blast hits to 42274 proteins in 991 species: Archae - 68; Bacteria - 11258; Metazoa - 46869; Fungi - 25620; Plants - 15010; Viruses - 3; Other Eukaryotes - 15635 (source: NCBI BLink). & (reliability: 160.2) & (original description: no original description) 0.9030507736107114 28 evm.model.tig00001030.36 no hits & (original description: no original description) 0.902487282936976 41 evm.model.tig00000692.77 (o49809|mfpa_brana : 283.0) Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a [Includes: Enoyl-CoA hydratase (EC 4.2.1.17); 3-2-trans-enoyl-CoA isomerase (EC 5.3.3.8); 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3); 3-hydroxyacyl-CoA dehydrogenase ( & (at3g06860 : 272.0) Encodes a multifunctional protein. Involved in peroxisomal fatty acid beta oxidation. Loss-of-function mutant lacks hydroxyacyl-CoA dehydrogenase activity and have reduced levels of long-chain enoyl-CoA hydratase activity. The mutant has fewer but larger peroxisomes.; multifunctional protein 2 (MFP2); FUNCTIONS IN: enoyl-CoA hydratase activity, 3-hydroxyacyl-CoA dehydrogenase activity; INVOLVED IN: fatty acid beta-oxidation; LOCATED IN: nucleolus, cell wall, peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Enoyl-CoA hydratase/isomerase, conserved site (InterPro:IPR018376), 3-hydroxyacyl-CoA dehydrogenase, conserved site (InterPro:IPR006180), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), NAD(P)-binding domain (InterPro:IPR016040), 3-hydroxyacyl-CoA dehydrogenase, NAD binding (InterPro:IPR006176), Crotonase, core (InterPro:IPR001753), 3-hydroxyacyl-CoA dehydrogenase, C-terminal (InterPro:IPR006108); BEST Arabidopsis thaliana protein match is: Enoyl-CoA hydratase/isomerase family (TAIR:AT4G29010.1); Has 46309 Blast hits to 45272 proteins in 2450 species: Archae - 810; Bacteria - 29664; Metazoa - 2011; Fungi - 1039; Plants - 666; Viruses - 0; Other Eukaryotes - 12119 (source: NCBI BLink). & (reliability: 544.0) & (original description: no original description) 0.902439334783483 98 evm.model.tig00020564.11 no hits & (original description: no original description) 0.9016366047290525 31 evm.model.tig00001629.2 no hits & (original description: no original description) 0.9014398292755059 36 evm.model.tig00020801.43 no hits & (original description: no original description) 0.901221306525795 66 evm.model.tig00000133.45 no hits & (original description: no original description) 0.9011596550297937 34 evm.model.tig00020903.50 no hits & (original description: no original description) 0.9003332505257544 35 evm.model.tig00000396.8 (at3g01090 : 117.0) encodes a SNF1-related protein kinase that physically interacts with SCF subunit SKP1/ASK1 and 20S proteosome subunit PAD1. It can also interact with PRL1 DWD-containing protein. Based on in vitro degradation assays and cul4cs and prl1 mutants, there is evidence that AKIN10 is degraded in a proteasome-dependent manner, and that this depends on a CUL4-PRL1 E3 ligase; SNF1 kinase homolog 10 (KIN10); FUNCTIONS IN: protein binding, protein serine/threonine kinase activity, protein kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: nuclear ubiquitin ligase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Kinase-associated KA1 (InterPro:IPR001772), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Protein kinase, Snf1-like AMPK (InterPro:IPR015741), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: SNF1 kinase homolog 11 (TAIR:AT3G29160.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q02723|rkin1_secce : 99.4) Carbon catabolite derepressing protein kinase (EC 2.7.11.1) - Secale cereale (Rye) & (reliability: 230.0) & (original description: no original description) 0.9001380974507296 36 evm.model.tig00020892.11 no hits & (original description: no original description) 0.8997294541133919 37 evm.model.tig00020601.19 no hits & (original description: no original description) 0.8990076547665067 38 evm.model.tig00020912.62 no hits & (original description: no original description) 0.8984380439054248 81 evm.model.tig00021319.19 no hits & (original description: no original description) 0.898002768076614 40 evm.model.tig00000459.59 no hits & (original description: no original description) 0.8976745460597209 41 evm.model.tig00020592.51 no hits & (original description: no original description) 0.8969056328622032 42 evm.model.tig00000169.5 no hits & (original description: no original description) 0.8968661981032513 43 evm.model.tig00021434.51 no hits & (original description: no original description) 0.8968646514611662 45 evm.model.tig00000630.52 no hits & (original description: no original description) 0.8957902315840087 46 evm.model.tig00000826.18 no hits & (original description: no original description) 0.8952431234337767 47 evm.model.tig00001085.22 no hits & (original description: no original description) 0.8951877897379192 49 evm.model.tig00020563.31 no hits & (original description: no original description) 0.8950244387605104 49 evm.model.tig00000391.13 no hits & (original description: no original description) 0.8946202436819716 75 evm.model.tig00000455.30 no hits & (original description: no original description) 0.8932161119370948 57 evm.model.tig00021434.25 (original description: no original description) 0.8929579800619974 100 evm.model.tig00000654.9 no hits & (original description: no original description) 0.8927626778443916 76 evm.model.tig00001187.24 no hits & (original description: no original description) 0.8919965577808378 69 evm.model.tig00020510.95 no hits & (original description: no original description) 0.8919502542821542 57 evm.model.tig00000640.12 no hits & (original description: no original description) 0.8917528607587759 94 evm.model.tig00021105.29 no hits & (original description: no original description) 0.8911152257077013 60 evm.model.tig00000147.42 no hits & (original description: no original description) 0.8907270666625607 61 evm.model.tig00020961.5 no hits & (original description: no original description) 0.8906645557287208 69 evm.model.tig00001310.12 no hits & (original description: no original description) 0.8897238523991483 64 evm.model.tig00000737.9 no hits & (original description: no original description) 0.8892772061164762 65 evm.model.tig00000385.29 no hits & (original description: no original description) 0.8892518669540743 89 evm.model.tig00020943.57 (o81122|etr1_maldo : 128.0) Ethylene receptor (EC 2.7.13.3) - Malus domestica (Apple) (Malus sylvestris) & (at1g66340 : 123.0) Similar to prokaryote sensory transduction proteins. Contains a histidine kinase and a response regulator domain. Homodimer. Membrane component. Binds ethylene. Mutations affect ethylene binding and metabolism of other plant hormones such as auxin, cytokinins, ABA and gibberellic acid. Ethylene receptor. Has histidine kinase activity. Is regulated by RTE1.; ETHYLENE RESPONSE 1 (ETR1); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), Signal transduction histidine kinase, core (InterPro:IPR005467), Signal transduction histidine kinase, hybrid-type, ethylene sensor (InterPro:IPR014525), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), GAF (InterPro:IPR003018), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: ethylene response sensor 1 (TAIR:AT2G40940.1); Has 102721 Blast hits to 98263 proteins in 3046 species: Archae - 757; Bacteria - 90102; Metazoa - 18; Fungi - 1611; Plants - 2314; Viruses - 21; Other Eukaryotes - 7898 (source: NCBI BLink). & (reliability: 226.0) & (original description: no original description) 0.888106215446182 69 evm.model.tig00020629.48 no hits & (original description: no original description) 0.8879316109326321 70 evm.model.tig00021365.20 (at1g15520 : 132.0) ABC transporter family involved in ABA transport and resistance to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers, stomata and roots.; pleiotropic drug resistance 12 (PDR12); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 11 (TAIR:AT1G66950.1); Has 377983 Blast hits to 279992 proteins in 3946 species: Archae - 7615; Bacteria - 304057; Metazoa - 8776; Fungi - 6428; Plants - 5794; Viruses - 2; Other Eukaryotes - 45311 (source: NCBI BLink). & (q8gu92|pdr2_orysa : 129.0) Probable pleiotropic drug resistance protein 2 - Oryza sativa (Rice) & (reliability: 264.0) & (original description: no original description) 0.8870535968458426 71 evm.model.tig00000190.21 no hits & (original description: no original description) 0.8855422568323053 72 evm.model.tig00000076.124 no hits & (original description: no original description) 0.8850470058416132 95 evm.model.tig00020610.141 no hits & (original description: no original description) 0.8845706001178204 74 evm.model.tig00000042.49 no hits & (original description: no original description) 0.8842700318683437 75 evm.model.tig00020563.33 no hits & (original description: no original description) 0.883668020018933 76 evm.model.tig00021438.7 no hits & (original description: no original description) 0.8831710875333689 77 evm.model.tig00001041.18 no hits & (original description: no original description) 0.8829813718799867 78 evm.model.tig00021518.24 no hits & (original description: no original description) 0.8815181196343576 79 evm.model.tig00001177.13 no hits & (original description: no original description) 0.8810016809734005 88 evm.model.tig00000704.79 (at5g37590 : 95.1) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G11540.1); Has 6183 Blast hits to 2629 proteins in 327 species: Archae - 94; Bacteria - 1884; Metazoa - 2136; Fungi - 1054; Plants - 282; Viruses - 0; Other Eukaryotes - 733 (source: NCBI BLink). & (reliability: 190.2) & (original description: no original description) 0.8805934958128164 82 evm.model.tig00020538.78 no hits & (original description: no original description) 0.8805519603276792 83 evm.model.tig00021742.19 no hits & (original description: no original description) 0.8798114002722922 84 evm.model.tig00021012.25 no hits & (original description: no original description) 0.8791901747035858 87 evm.model.tig00001155.8 no hits & (original description: no original description) 0.8786420686230823 89 evm.model.tig00022080.14 no hits & (original description: no original description) 0.8786298990365854 92 evm.model.tig00020816.61 no hits & (original description: no original description) 0.8785513583313834 91 evm.model.tig00020927.25 "(at5g52400 : 84.3) member of CYP715A; ""cytochrome P450, family 715, subfamily A, polypeptide 1"" (CYP715A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to salt stress; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 735, subfamily A, polypeptide 1 (TAIR:AT5G38450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 168.6) & (original description: no original description)" 0.8782964157047995 93 evm.model.tig00021244.36 no hits & (original description: no original description) 0.8782845279972806 94 evm.model.tig00020816.81 no hits & (original description: no original description) 0.8780740967085843 95 evm.model.tig00000654.18 no hits & (original description: no original description) 0.8767394142565834 98 evm.model.tig00000451.16 no hits & (original description: no original description) 0.8761238158500709 99 evm.model.tig00020564.15 no hits & (original description: no original description) 0.8760182994386716 100