Sequence Description Alias PCC hrr evm.model.tig00020830.39 (at4g11570 : 138.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT3G10970.1); Has 9886 Blast hits to 9886 proteins in 1971 species: Archae - 106; Bacteria - 8631; Metazoa - 63; Fungi - 26; Plants - 330; Viruses - 0; Other Eukaryotes - 730 (source: NCBI BLink). & (reliability: 276.0) & (original description: no original description) 0.9077757738614197 6 evm.model.tig00000057.44 no hits & (original description: no original description) 0.8902870607938341 58 evm.model.tig00000254.94 no hits & (original description: no original description) 0.8890174548542995 40 evm.model.tig00020961.136 (at5g20140 : 117.0) SOUL heme-binding family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2358 (InterPro:IPR018790), SOUL haem-binding protein (InterPro:IPR006917); BEST Arabidopsis thaliana protein match is: SOUL heme-binding family protein (TAIR:AT3G10130.1). & (reliability: 234.0) & (original description: no original description) 0.8860918208679155 50 evm.model.tig00000025.27 (at5g23670 : 516.0) Encodes the LCB2 subunit of serine palmitoyltransferase, an enzyme involved in sphingosine biosynthesis. The protein is localized to the endoplasmic reticulum.; long chain base2 (LCB2); CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class-II, pyridoxal-phosphate binding site (InterPro:IPR001917), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: serine palmitoyltransferase 1 (TAIR:AT3G48780.1); Has 10446 Blast hits to 10416 proteins in 2172 species: Archae - 77; Bacteria - 7037; Metazoa - 738; Fungi - 589; Plants - 234; Viruses - 9; Other Eukaryotes - 1762 (source: NCBI BLink). & (reliability: 1032.0) & (original description: no original description) 0.8846384954059843 12 evm.model.tig00000411.27 no hits & (original description: no original description) 0.8816379074982812 6 evm.model.tig00000949.24 no hits & (original description: no original description) 0.8788326207382935 44 evm.model.tig00021462.44 no hits & (original description: no original description) 0.8784815985100647 8 evm.model.tig00020515.11 (at5g12130 : 93.6) PIGMENT DEFECTIVE 149 (PDE149); CONTAINS InterPro DOMAIN/s: Integral membrane protein TerC (InterPro:IPR005496), Integral membrane protein TerC, riboswitch-linked (InterPro:IPR022369); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 187.2) & (original description: no original description) 0.8745975111679122 48 evm.model.tig00001085.21 (at3g19170 : 158.0) Zinc metalloprotease pitrilysin subfamily A. Signal peptide degrading enzyme targeted to mitochondria and chloroplasts. Expressed only in siliques and flowers; presequence protease 1 (PREP1); CONTAINS InterPro DOMAIN/s: Peptidase M16, C-terminal (InterPro:IPR007863), Peptidase M16C associated (InterPro:IPR013578), Peptidase M16, N-terminal (InterPro:IPR011765), Metalloenzyme, LuxS/M16 peptidase-like, metal-binding (InterPro:IPR011249), Peptidase M16, core (InterPro:IPR011237); BEST Arabidopsis thaliana protein match is: presequence protease 2 (TAIR:AT1G49630.2). & (reliability: 314.0) & (original description: no original description) 0.874534856445097 92 evm.model.tig00000949.8 (at1g02475 : 101.0) Polyketide cyclase/dehydrase and lipid transport superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Streptomyces cyclase/dehydrase (InterPro:IPR005031); BEST Arabidopsis thaliana protein match is: Polyketide cyclase / dehydrase and lipid transport protein (TAIR:AT4G01883.1); Has 515 Blast hits to 515 proteins in 169 species: Archae - 0; Bacteria - 342; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 117 (source: NCBI BLink). & (reliability: 202.0) & (original description: no original description) 0.8689747224416832 22 evm.model.tig00020830.64 (at1g07180 : 312.0) Internal NAD(P)H dehydrogenase in mitochondria. The predicted protein sequence has high homology with other designated NAD(P)H DHs from microorganisms; the capacity for matrix NAD(P)H oxidation via the rotenone-insensitive pathway is significantly reduced in the Atndi1 mutant plant line; the in vitro translation product of AtNDI1 is imported into isolated mitochondria and located on the inside of the inner membrane.; alternative NAD(P)H dehydrogenase 1 (NDA1); FUNCTIONS IN: NADH dehydrogenase activity; INVOLVED IN: oxidation reduction; LOCATED IN: intrinsic to mitochondrial inner membrane, mitochondrion; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: alternative NAD(P)H dehydrogenase 2 (TAIR:AT2G29990.1); Has 9792 Blast hits to 9601 proteins in 2135 species: Archae - 248; Bacteria - 7524; Metazoa - 53; Fungi - 647; Plants - 379; Viruses - 0; Other Eukaryotes - 941 (source: NCBI BLink). & (reliability: 570.0) & (original description: no original description) 0.8676912722836521 66 evm.model.tig00020801.52 no hits & (original description: no original description) 0.8676269424986065 13 evm.model.tig00020801.74 (at3g08950 : 181.0) Encodes HCC1, homologue of the copper chaperone SCO1 (synthesis of cytochrome c oxidase 1) from the yeast Saccharomyces cerevisiae. SCO1 encodes a mitochondrial protein that is essential for the correct assembly of complex IV in the respiratory chain. HCC1 is localized in the mitochondrion. A chimeric yeast Sco1-Arabidopsis HCC1 protein complements yeast Sco1 activity. Embryos of hcc1 mutants became arrested at various developmental stages, mostly at the heart stage.; electron transport SCO1/SenC family protein; FUNCTIONS IN: copper ion binding; INVOLVED IN: copper ion transport, respiratory chain complex IV assembly, cellular copper ion homeostasis, cell redox homeostasis; LOCATED IN: mitochondrion, mitochondrial inner membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Synthesis of cytochrome c oxidase, Sco1/Sco2 (InterPro:IPR017276), Copper chaperone SCO1/SenC (InterPro:IPR003782), Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT4G39740.1); Has 4072 Blast hits to 4072 proteins in 1098 species: Archae - 11; Bacteria - 2439; Metazoa - 165; Fungi - 147; Plants - 84; Viruses - 0; Other Eukaryotes - 1226 (source: NCBI BLink). & (reliability: 362.0) & (original description: no original description) 0.8624828368385147 77 evm.model.tig00001085.20 (at3g19170 : 238.0) Zinc metalloprotease pitrilysin subfamily A. Signal peptide degrading enzyme targeted to mitochondria and chloroplasts. Expressed only in siliques and flowers; presequence protease 1 (PREP1); CONTAINS InterPro DOMAIN/s: Peptidase M16, C-terminal (InterPro:IPR007863), Peptidase M16C associated (InterPro:IPR013578), Peptidase M16, N-terminal (InterPro:IPR011765), Metalloenzyme, LuxS/M16 peptidase-like, metal-binding (InterPro:IPR011249), Peptidase M16, core (InterPro:IPR011237); BEST Arabidopsis thaliana protein match is: presequence protease 2 (TAIR:AT1G49630.2). & (reliability: 472.0) & (original description: no original description) 0.8580997594038847 43 evm.model.tig00000293.15 no hits & (original description: no original description) 0.855677407887901 43 evm.model.tig00000912.23 no hits & (original description: no original description) 0.8548936091750703 85 evm.model.tig00000350.20 no hits & (original description: no original description) 0.8536385381396822 43 evm.model.tig00021234.22 (at2g41880 : 169.0) Guanylate kinase. Involved in nucleotide metabolism.; guanylate kinase 1 (GK-1); FUNCTIONS IN: guanylate kinase activity; INVOLVED IN: nucleotide metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Guanylate kinase (InterPro:IPR008144), Guanylate kinase/L-type calcium channel (InterPro:IPR008145), Guanylate kinase, sub-group (InterPro:IPR017665); BEST Arabidopsis thaliana protein match is: guanylate kinase (TAIR:AT3G57550.1); Has 9957 Blast hits to 9932 proteins in 2781 species: Archae - 0; Bacteria - 5508; Metazoa - 1607; Fungi - 176; Plants - 140; Viruses - 105; Other Eukaryotes - 2421 (source: NCBI BLink). & (reliability: 338.0) & (original description: no original description) 0.8532316769746291 24 evm.model.tig00021462.42 (at4g05020 : 356.0) NAD(P)H dehydrogenase B2 (NDB2); FUNCTIONS IN: disulfide oxidoreductase activity, oxidoreductase activity, FAD binding, calcium ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: mitochondrion, extrinsic to mitochondrial inner membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327), EF-HAND 2 (InterPro:IPR018249), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: NAD(P)H dehydrogenase B3 (TAIR:AT4G21490.1). & (reliability: 712.0) & (original description: no original description) 0.8472853471883759 62 evm.model.tig00000852.51 no hits & (original description: no original description) 0.846330163771078 62 evm.model.tig00021589.30 no hits & (original description: no original description) 0.8458211130071627 74 evm.model.tig00000865.19 no hits & (original description: no original description) 0.8449130829985105 28 evm.model.tig00000615.60 no hits & (original description: no original description) 0.8416324165045612 31 evm.model.tig00021036.19 (at5g54130 : 97.1) Calcium-binding endonuclease/exonuclease/phosphatase family; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: Calcium-binding endonuclease/exonuclease/phosphatase family (TAIR:AT1G02270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 194.2) & (original description: no original description) 0.8413255016201311 87 evm.model.tig00020938.9 (at4g31390 : 285.0) Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast, plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase, catalytic domain (InterPro:IPR000719), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G79600.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 570.0) & (original description: no original description) 0.8348422130519625 87 evm.model.tig00000217.39 (o22567|dxs_orysa : 830.0) Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplast precursor (EC 2.2.1.7) (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS) - Oryza sativa (Rice) & (at4g15560 : 812.0) Encodes a protein with 1-deoxyxylulose 5-phosphate synthase activity involved in the MEP pathway. It is essential for chloroplast development in Arabidopsis; CLOROPLASTOS ALTERADOS 1 (CLA1); FUNCTIONS IN: 1-deoxy-D-xylulose-5-phosphate synthase activity; INVOLVED IN: chlorophyll biosynthetic process, response to light stimulus, isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, N-terminal (InterPro:IPR005474), Transketolase, C-terminal (InterPro:IPR005476), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475), Transketolase binding site (InterPro:IPR020826), Transketolase-like, C-terminal (InterPro:IPR015941), Deoxyxylulose-5-phosphate synthase (InterPro:IPR005477), Dehydrogenase, E1 component (InterPro:IPR001017); BEST Arabidopsis thaliana protein match is: 1-deoxy-D-xylulose 5-phosphate synthase 1 (TAIR:AT3G21500.2); Has 24450 Blast hits to 24392 proteins in 2940 species: Archae - 267; Bacteria - 15281; Metazoa - 526; Fungi - 278; Plants - 446; Viruses - 0; Other Eukaryotes - 7652 (source: NCBI BLink). & (reliability: 1624.0) & (original description: no original description) 0.8303459339921125 83 evm.model.tig00000342.10 no hits & (original description: no original description) 0.8248569439832377 87 evm.model.tig00000640.27 no hits & (original description: no original description) 0.8222611394710931 84 evm.model.tig00000219.67 (at4g11260 : 193.0) Functions in plant disease resistance signaling, SCF(TIR1) mediated degradation of Aux/IAA proteins and HSP90 mediated degradation of R resistance proteins. AtSGT1a and AtSGT1b are functionally redundant in the resistance to pathogenes. AtSGT1b was more highly expressed than AtSGT1. The N-terminal TPR domain of AtSGT1a reduces the steady-state level of Arabidopsis SGT1 proteins whereas the same domain from AtSGT1b enhances SGT1 accumulation. The TPR domain is dispensable for SGT1 resistance.; SGT1B; FUNCTIONS IN: protein binding; INVOLVED IN: in 6 processes; LOCATED IN: SCF ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: CS-like domain (InterPro:IPR007052), Tetratricopeptide-like helical (InterPro:IPR011990), SGS (InterPro:IPR007699), Tetratricopeptide repeat-containing (InterPro:IPR013026), HSP20-like chaperone (InterPro:IPR008978), Tetratricopeptide repeat (InterPro:IPR019734), CS domain (InterPro:IPR017447); BEST Arabidopsis thaliana protein match is: phosphatase-related (TAIR:AT4G23570.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 386.0) & (original description: no original description) 0.8216489358693713 56 evm.model.tig00020903.40 (at1g01120 : 538.0) Encodes a condensing enzyme KCS1 (3-ketoacyl-CoA synthase 1) which is involved in the critical fatty acid elongation process in wax biosynthesis.; 3-ketoacyl-CoA synthase 1 (KCS1); FUNCTIONS IN: fatty acid elongase activity, acyltransferase activity; INVOLVED IN: in 7 processes; LOCATED IN: cytosolic ribosome, endoplasmic reticulum, membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 11 (TAIR:AT2G26640.1); Has 3961 Blast hits to 3946 proteins in 966 species: Archae - 0; Bacteria - 1388; Metazoa - 0; Fungi - 5; Plants - 2408; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink). & (reliability: 1076.0) & (original description: no original description) 0.8193133103438411 53 evm.model.tig00000076.25 no hits & (original description: no original description) 0.8175060457621108 55 evm.model.tig00020629.142 no hits & (original description: no original description) 0.8164463524185885 94 evm.model.tig00000411.28 no hits & (original description: no original description) 0.813399883986168 62 evm.model.tig00000692.80 no hits & (original description: no original description) 0.8123332900716602 64 evm.model.tig00021168.14 no hits & (original description: no original description) 0.8080410145069098 73 evm.model.tig00000319.26 no hits & (original description: no original description) 0.8073198225657658 74 evm.model.tig00000923.8 (q39570|yptc4_chlre : 206.0) GTP-binding protein YPTC4 - Chlamydomonas reinhardtii & (at4g35860 : 200.0) GTP-binding protein ATGB2; GTP-binding 2 (GB2); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Ras small GTPase, Rab type (InterPro:IPR003579), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog B1C (TAIR:AT4G17170.1); Has 23664 Blast hits to 23631 proteins in 677 species: Archae - 2; Bacteria - 77; Metazoa - 12254; Fungi - 3226; Plants - 2690; Viruses - 20; Other Eukaryotes - 5395 (source: NCBI BLink). & (reliability: 400.0) & (original description: no original description) 0.8054589260771736 79 evm.model.tig00020944.18 no hits & (original description: no original description) 0.8053864858364368 95 evm.model.tig00021108.19 (at1g04600 : 533.0) member of Myosin-like proteins; myosin XI A (XIA); FUNCTIONS IN: motor activity; INVOLVED IN: actin filament-based movement; LOCATED IN: myosin complex; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Dil domain (InterPro:IPR018444), Dilute (InterPro:IPR002710), Prefoldin (InterPro:IPR009053), Myosin, N-terminal, SH3-like (InterPro:IPR004009), Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: myosin XI D (TAIR:AT2G33240.1); Has 140144 Blast hits to 79260 proteins in 3527 species: Archae - 2295; Bacteria - 25176; Metazoa - 58445; Fungi - 12073; Plants - 6566; Viruses - 744; Other Eukaryotes - 34845 (source: NCBI BLink). & (reliability: 978.0) & (original description: no original description) 0.8039572871979616 83 evm.model.tig00021464.52 no hits & (original description: no original description) 0.8018415037868762 96 evm.model.tig00021254.40 no hits & (original description: no original description) 0.8013626274195298 92 evm.model.tig00020675.18 no hits & (original description: no original description) 0.8000685055125646 95 evm.model.tig00000478.1 no hits & (original description: no original description) 0.7988649728155736 98 evm.model.tig00020961.57 (at2g44920 : 98.6) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentapeptide repeat (InterPro:IPR001646); BEST Arabidopsis thaliana protein match is: Pentapeptide repeat-containing protein (TAIR:AT1G12250.1); Has 15593 Blast hits to 6460 proteins in 916 species: Archae - 263; Bacteria - 11679; Metazoa - 260; Fungi - 2; Plants - 261; Viruses - 44; Other Eukaryotes - 3084 (source: NCBI BLink). & (reliability: 197.2) & (original description: no original description) 0.7985725749628882 99 evm.model.tig00020904.113 (at1g60500 : 220.0) Dynamin related protein 4C (DRP4C); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: egg cell; CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), Dynamin, GTPase domain (InterPro:IPR001401), GTPase effector domain, GED (InterPro:IPR020850), Dynamin central region (InterPro:IPR000375), Interferon-induced Mx protein (InterPro:IPR015577); BEST Arabidopsis thaliana protein match is: Dynamin related protein 4A (TAIR:AT1G60530.1); Has 2653 Blast hits to 2628 proteins in 285 species: Archae - 0; Bacteria - 0; Metazoa - 1034; Fungi - 820; Plants - 506; Viruses - 0; Other Eukaryotes - 293 (source: NCBI BLink). & (reliability: 440.0) & (original description: no original description) 0.7983435609785172 100