Sequence Description Alias PCC hrr evm.model.tig00000789.34 no hits & (original description: no original description) 0.9159445004391564 1 evm.model.tig00000444.6 no hits & (original description: no original description) 0.904470083400607 34 evm.model.tig00000545.15 no hits & (original description: no original description) 0.9039625784282231 9 evm.model.tig00000863.52 no hits & (original description: no original description) 0.9038805179729216 20 evm.model.tig00000042.147 no hits & (original description: no original description) 0.9024431035125938 5 evm.model.tig00000523.54 (at3g54130 : 127.0) Josephin family protein; CONTAINS InterPro DOMAIN/s: Machado-Joseph disease protein MJD (InterPro:IPR006155); BEST Arabidopsis thaliana protein match is: JOSEPHIN-like protein (TAIR:AT2G29640.1); Has 590 Blast hits to 584 proteins in 114 species: Archae - 0; Bacteria - 0; Metazoa - 441; Fungi - 14; Plants - 76; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink). & (q8lq36|atx3_orysa : 121.0) Putative ataxin-3 homolog (EC 3.4.22.-) - Oryza sativa (Rice) & (reliability: 254.0) & (original description: no original description) 0.9005352722287571 6 evm.model.tig00001094.31 no hits & (original description: no original description) 0.8991902720291931 7 evm.model.tig00001030.30 no hits & (original description: no original description) 0.8988608166756638 20 evm.model.tig00020614.44 no hits & (original description: no original description) 0.895308440269013 9 evm.model.tig00021501.23 (at1g68310 : 154.0) Encodes a protein that has been shown to specifically interact with a sequence motif, PIEPPPHH, in the cytoplasmic tail of a membrane protein that directs the protein from the ER to vacuoles where it is internalized.; FUNCTIONS IN: vacuolar sorting signal binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF59 (InterPro:IPR002744); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF59) (TAIR:AT3G50845.1); Has 563 Blast hits to 563 proteins in 217 species: Archae - 4; Bacteria - 0; Metazoa - 246; Fungi - 136; Plants - 85; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink). & (reliability: 308.0) & (original description: no original description) 0.8947164414824533 10 evm.model.tig00021127.30 no hits & (original description: no original description) 0.8898025819679231 47 evm.model.tig00021319.37 no hits & (original description: no original description) 0.8888560047449003 12 evm.model.tig00000383.65 no hits & (original description: no original description) 0.8854978673514725 13 evm.model.tig00000692.26 no hits & (original description: no original description) 0.8854687422464212 79 evm.model.tig00020610.28 no hits & (original description: no original description) 0.8848297318428635 84 evm.model.tig00020538.10 (p93171|calm_helan : 96.7) Calmodulin (CaM) - Helianthus annuus (Common sunflower) & (at5g21274 : 95.9) Encodes a calmodulin isoform. Expressed in leaves.; calmodulin 6 (CAM6); FUNCTIONS IN: calcium ion binding; INVOLVED IN: calcium-mediated signaling; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell, leaf; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin 5 (TAIR:AT2G27030.3); Has 34463 Blast hits to 23268 proteins in 1758 species: Archae - 4; Bacteria - 213; Metazoa - 14512; Fungi - 7798; Plants - 6959; Viruses - 0; Other Eukaryotes - 4977 (source: NCBI BLink). & (reliability: 191.8) & (original description: no original description) 0.8847631305509635 23 evm.model.tig00000551.8 no hits & (original description: no original description) 0.8846991965326866 24 evm.model.tig00021318.29 no hits & (original description: no original description) 0.8769334292813393 37 evm.model.tig00000144.30 (original description: no original description) 0.8768710579329255 73 evm.model.tig00000829.22 (at5g26570 : 86.7) chloroplastidic phosphoglucan, water dikinase (PWD) which is required for normal degradation of leaf starch in Arabidopsis. NMR analysis of the mutants, suggests that the gene is specifically involved in the phosphorylation of the glucosyl residues of starch at the C3 position.; PHOSPHOGLUCAN WATER DIKINASE (PWD); FUNCTIONS IN: carbohydrate kinase activity, catalytic activity, phosphoglucan, water dikinase activity; INVOLVED IN: protein amino acid autophosphorylation, carbohydrate metabolic process, starch metabolic process, starch catabolic process; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin-like fold (InterPro:IPR013783), Carbohydrate-binding-like fold (InterPro:IPR013784), Glycoside hydrolase, carbohydrate-binding (InterPro:IPR002044); BEST Arabidopsis thaliana protein match is: Pyruvate phosphate dikinase, PEP/pyruvate binding domain (TAIR:AT1G10760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q2qtc2|pwd_orysa : 83.6) Phosphoglucan, water dikinase, chloroplast precursor (EC 2.7.9.5) - Oryza sativa (Rice) & (reliability: 173.4) & (original description: no original description) 0.8731662798442745 71 evm.model.tig00020875.11 (at5g22300 : 273.0) encodes a nitrilase isomer. The purified enzyme shows a strong substrate specificity for beta-cyano-L-alanine, a intermediate product of the cyanide detoxification pathway.; nitrilase 4 (NIT4); CONTAINS InterPro DOMAIN/s: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (InterPro:IPR003010), Nitrilase/cyanide hydratase, conserved site (InterPro:IPR000132); BEST Arabidopsis thaliana protein match is: nitrilase 3 (TAIR:AT3G44320.1); Has 7653 Blast hits to 7575 proteins in 1747 species: Archae - 162; Bacteria - 5078; Metazoa - 407; Fungi - 539; Plants - 330; Viruses - 11; Other Eukaryotes - 1126 (source: NCBI BLink). & (q42965|nrl4_tobac : 271.0) Nitrilase 4 (EC 3.5.5.1) - Nicotiana tabacum (Common tobacco) & (reliability: 546.0) & (original description: no original description) 0.8711002449865575 85 evm.model.tig00000880.24 no hits & (original description: no original description) 0.8667355914742098 25 evm.model.tig00020710.77 no hits & (original description: no original description) 0.8665884449730621 28 evm.model.tig00000865.22 no hits & (original description: no original description) 0.8663325733973086 27 evm.model.tig00020515.8 no hits & (original description: no original description) 0.8651812271754837 51 evm.model.tig00021518.4 (p26356|tbp1_wheat : 221.0) TATA-box-binding protein 1 (TATA-box factor 1) (TATA-binding factor 1) (TATA sequence-binding protein 1) (TBP-1) (Transcription initiation factor TFIID TBP-1 subunit) - Triticum aestivum (Wheat) & (at3g13445 : 213.0) TBP (TATA binding protein) associates with TAF(II)s (TBP-associated factors) to form the TFIID general transcription factor complex; TATA binding protein 1 (TBP1); FUNCTIONS IN: RNA polymerase II transcription factor activity, binding, DNA binding; INVOLVED IN: transcription initiation from RNA polymerase II promoter, regulation of transcription, DNA-dependent; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TATA-box binding (InterPro:IPR000814), Beta2-adaptin/TATA-box binding, C-terminal (InterPro:IPR012295), Transcription factor TFIID, C-terminal/DNA glycosylase, N-terminal (InterPro:IPR012294); BEST Arabidopsis thaliana protein match is: TATA binding protein 2 (TAIR:AT1G55520.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 426.0) & (original description: no original description) 0.8606367667907814 76 evm.model.tig00021582.19 (q6x4a2|cipk1_orysa : 84.7) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (at4g14580 : 84.3) CBL-interacting protein kinase; CBL-interacting protein kinase 4 (CIPK4); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: signal transduction, protein amino acid phosphorylation; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 7 (TAIR:AT3G23000.1); Has 128256 Blast hits to 126264 proteins in 4408 species: Archae - 175; Bacteria - 15086; Metazoa - 46975; Fungi - 12948; Plants - 31367; Viruses - 524; Other Eukaryotes - 21181 (source: NCBI BLink). & (reliability: 168.6) & (original description: no original description) 0.8603880669650461 81 evm.model.tig00001206.25 (at3g15660 : 113.0) glutaredoxin 4 (GRX4); FUNCTIONS IN: metal ion binding; INVOLVED IN: cell redox homeostasis; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin (InterPro:IPR002109), Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336), Glutaredoxin-related protein (InterPro:IPR004480); BEST Arabidopsis thaliana protein match is: thioredoxin family protein (TAIR:AT4G04950.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 210.0) & (original description: no original description) 0.8595463122673375 34 evm.model.tig00020816.31 no hits & (original description: no original description) 0.8583394949368612 37 evm.model.tig00000144.6 no hits & (original description: no original description) 0.8569502559222196 41 evm.model.tig00000769.43 (at1g34065 : 114.0) S-adenosylmethionine carrier 2 (SAMC2); FUNCTIONS IN: binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine carrier 1 (TAIR:AT4G39460.2); Has 26837 Blast hits to 14208 proteins in 451 species: Archae - 0; Bacteria - 2; Metazoa - 11303; Fungi - 7745; Plants - 4960; Viruses - 0; Other Eukaryotes - 2827 (source: NCBI BLink). & (reliability: 228.0) & (original description: no original description) 0.8566446337003096 42 evm.model.tig00001371.6 (at1g01140 : 315.0) Encodes a CBL-interacting protein kinase with similarity to SOS2; CBL-interacting protein kinase 9 (CIPK9); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: in 6 processes; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 23 (TAIR:AT1G30270.1); Has 130572 Blast hits to 128490 proteins in 4426 species: Archae - 165; Bacteria - 15544; Metazoa - 48044; Fungi - 13206; Plants - 31490; Viruses - 522; Other Eukaryotes - 21601 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 293.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 630.0) & (original description: no original description) 0.8549741619548165 69 evm.model.tig00020553.53 no hits & (original description: no original description) 0.8536020028567773 78 evm.model.tig00020816.113 no hits & (original description: no original description) 0.8503486459940742 57 evm.model.tig00001408.16 no hits & (original description: no original description) 0.8486904405998099 57 evm.model.tig00021234.9 no hits & (original description: no original description) 0.8485299603288301 86 evm.model.tig00020563.123 no hits & (original description: no original description) 0.8484302943753645 59 evm.model.tig00001284.2 (at5g58070 : 82.8) Encodes a temperature-induced lipocalin TIL1. Involved in thermotolerance. Peripherally associated with plasma membrane.; temperature-induced lipocalin (TIL); FUNCTIONS IN: binding, transporter activity; INVOLVED IN: transport, response to cold, response to light stimulus, response to heat; LOCATED IN: mitochondrion, endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Lipocalin, bacterial (InterPro:IPR002446), Lipocalin, ApoD type (InterPro:IPR022271), Lipocalin-like (InterPro:IPR013208), Lipocalin conserved site (InterPro:IPR022272), Calycin (InterPro:IPR012674), Calycin-like (InterPro:IPR011038); Has 2007 Blast hits to 1991 proteins in 692 species: Archae - 0; Bacteria - 1480; Metazoa - 169; Fungi - 10; Plants - 132; Viruses - 6; Other Eukaryotes - 210 (source: NCBI BLink). & (reliability: 165.6) & (original description: no original description) 0.8483961932648567 60 evm.model.tig00021726.6 no hits & (original description: no original description) 0.8452194306957796 63 evm.model.tig00001130.9 (q6z808|rac3_orysa : 145.0) Rac-like GTP-binding protein 3 (OsRac3) - Oryza sativa (Rice) & (at2g44690 : 144.0) A member of ROP GTPase gene family.; Arabidopsis RAC-like 9 (ARAC9); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), Ras GTPase (InterPro:IPR001806), Ras small GTPase, Rab type (InterPro:IPR003579), Ras (InterPro:IPR013753), Ras small GTPase, Ras type (InterPro:IPR003577), Small GTPase, Rho type (InterPro:IPR003578); BEST Arabidopsis thaliana protein match is: RAC-like 3 (TAIR:AT4G35020.3); Has 24763 Blast hits to 24736 proteins in 683 species: Archae - 8; Bacteria - 73; Metazoa - 12794; Fungi - 3855; Plants - 2697; Viruses - 20; Other Eukaryotes - 5316 (source: NCBI BLink). & (reliability: 288.0) & (original description: no original description) 0.8450231078234574 64 evm.model.tig00020965.36 (at5g54500 : 119.0) Encodes a flavin mononucleotide-binding flavodoxin-like quinone reductase that is a primary auxin-response gene.; flavodoxin-like quinone reductase 1 (FQR1); CONTAINS InterPro DOMAIN/s: NADPH-dependent FMN reductase (InterPro:IPR005025), Flavoprotein WrbA (InterPro:IPR010089), Flavodoxin/nitric oxide synthase (InterPro:IPR008254); BEST Arabidopsis thaliana protein match is: Quinone reductase family protein (TAIR:AT4G27270.1). & (reliability: 238.0) & (original description: no original description) 0.8445392747528785 97 evm.model.tig00021434.8 no hits & (original description: no original description) 0.8440833076918011 91 evm.model.tig00021365.9 no hits & (original description: no original description) 0.8440752801107723 67 evm.model.tig00021350.26 no hits & (original description: no original description) 0.844048702303107 68 evm.model.tig00020961.83 (at1g18450 : 353.0) Encodes a gene similar to actin-related proteins in other organisms. Member of nuclear ARP family of genes. Component of chromatin remodeling complexes, involved in chromatin-mediated gene regulation. Phenotype of the arp4-1 mutant allele revealed partial sterility due to defects in anther development. Targeting the distinct, 3' UTR of AtARP4 transcripts with RNA interference caused a drastic reduction in the level of AtARP4 protein expression, and resulted in strong pleiotropic phenotypes such as altered organization of plant organs, early flowering, delayed flower senescence and high levels of sterility. Western blot analysis and immunolabelling demonstrated a clear correlation between reductions in the level of AtARP4 expression and severity of the phenotypes.; actin-related protein 4 (ARP4); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: long-day photoperiodism, flowering, chromatin organization, pollen sperm cell differentiation; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Actin/actin-like (InterPro:IPR004000); BEST Arabidopsis thaliana protein match is: actin-11 (TAIR:AT3G12110.1); Has 13669 Blast hits to 13362 proteins in 2792 species: Archae - 2; Bacteria - 480; Metazoa - 5593; Fungi - 3430; Plants - 1457; Viruses - 2; Other Eukaryotes - 2705 (source: NCBI BLink). & (p17299|act3_orysa : 238.0) Actin-3 - Oryza sativa (Rice) & (reliability: 706.0) & (original description: no original description) 0.8395804088716277 83 evm.model.tig00000851.20 no hits & (original description: no original description) 0.8393595734658056 84 evm.model.tig00000912.30 no hits & (original description: no original description) 0.8390185501162359 99 evm.model.tig00020554.141 no hits & (original description: no original description) 0.8382064349197437 89 evm.model.tig00000383.29 (at1g54140 : 131.0) putative TATA binding protein associated factor 21kDa; TATA binding protein associated factor 21kDa subunit (TAFII21); FUNCTIONS IN: transcription initiation factor activity, DNA binding; INVOLVED IN: transcription initiation; LOCATED IN: transcription factor TFIID complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor TAFII-31 (InterPro:IPR003162), Histone-fold (InterPro:IPR009072); Has 434 Blast hits to 434 proteins in 170 species: Archae - 0; Bacteria - 2; Metazoa - 206; Fungi - 130; Plants - 53; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink). & (reliability: 262.0) & (original description: no original description) 0.8346767688915193 98