Sequence Description Alias PCC hrr evm.model.tig00021254.2 (at3g17040 : 186.0) It is a RNA tetratricopeptide repeat-containing protein required for normal processing of transcripts from the polycistronic chloroplast psbB-psbT-psbH-petB-petD operon coding for proteins of the photosystem II and cytochrome b6/f complexes. Localizes to the chloroplast membrane. Involved in regulating plastidial gene expression and biogenesis.; high chlorophyll fluorescent 107 (HCF107); FUNCTIONS IN: binding; INVOLVED IN: plastid organization, RNA processing, regulation of translation; LOCATED IN: chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT helix (InterPro:IPR003107), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: pre-mRNA splicing factor-related (TAIR:AT4G03430.1). & (q9fns4|mbb1_chlre : 180.0) PsbB mRNA maturation factor Mbb1, chloroplast precursor - Chlamydomonas reinhardtii & (reliability: 372.0) & (original description: no original description) 0.8970442070363372 24 evm.model.tig00021070.10 no hits & (original description: no original description) 0.8947708730880441 4 evm.model.tig00000803.4 (at3g12520 : 189.0) Encodes a sulfate transporter that in induced under sulfate limitation.; sulfate transporter 4;2 (SULTR4;2); FUNCTIONS IN: sulfate transmembrane transporter activity; INVOLVED IN: sulfate transport, transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sulphate transporter (InterPro:IPR011547), Sulphate transporter/antisigma-factor antagonist STAS (InterPro:IPR002645), Sulphate anion transporter, conserved site (InterPro:IPR018045), Sulphate anion transporter (InterPro:IPR001902); BEST Arabidopsis thaliana protein match is: sulfate transporter 4.1 (TAIR:AT5G13550.1). & (q02920|no70_soybn : 113.0) Early nodulin 70 - Glycine max (Soybean) & (reliability: 378.0) & (original description: no original description) 0.8913532030643073 7 evm.model.tig00001254.7 (at2g47800 : 162.0) Encodes a plasma membrane localized ATPase transporter involved in multidrug transport. The expression of this gene is upregulated by herbicide safeners such as benoxacor, fluxofenim and fenclorim.; multidrug resistance-associated protein 4 (MRP4); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, folic acid transporter activity; INVOLVED IN: response to water deprivation, drug transmembrane transport, response to wounding, response to nematode, stomatal movement; LOCATED IN: vacuolar membrane, plasma membrane, vacuole, plant-type vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 10 (TAIR:AT3G62700.1); Has 714857 Blast hits to 368077 proteins in 3991 species: Archae - 12925; Bacteria - 579268; Metazoa - 12980; Fungi - 8565; Plants - 6599; Viruses - 19; Other Eukaryotes - 94501 (source: NCBI BLink). & (q6yuu5|mdr_orysa : 85.1) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 324.0) & (original description: no original description) 0.8854599985691657 44 evm.model.tig00000704.24 no hits & (original description: no original description) 0.8796963661945839 34 evm.model.tig00000769.37 (at3g09600 : 109.0) Homeodomain-like superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 9 processes; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: LHY/CCA1-like 1 (TAIR:AT5G02840.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 202.0) & (original description: no original description) 0.878066656648974 6 evm.model.tig00001067.12 no hits & (original description: no original description) 0.8771019131884608 21 evm.model.tig00000989.41 no hits & (original description: no original description) 0.8750777245339392 8 evm.model.tig00000955.26 no hits & (original description: no original description) 0.8706362965499496 30 evm.model.tig00021491.2 no hits & (original description: no original description) 0.8661047609441066 46 evm.model.tig00020944.33 no hits & (original description: no original description) 0.8660454115383415 11 evm.model.tig00020553.108 (at1g04600 : 272.0) member of Myosin-like proteins; myosin XI A (XIA); FUNCTIONS IN: motor activity; INVOLVED IN: actin filament-based movement; LOCATED IN: myosin complex; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Dil domain (InterPro:IPR018444), Dilute (InterPro:IPR002710), Prefoldin (InterPro:IPR009053), Myosin, N-terminal, SH3-like (InterPro:IPR004009), Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: myosin XI D (TAIR:AT2G33240.1); Has 140144 Blast hits to 79260 proteins in 3527 species: Archae - 2295; Bacteria - 25176; Metazoa - 58445; Fungi - 12073; Plants - 6566; Viruses - 744; Other Eukaryotes - 34845 (source: NCBI BLink). & (reliability: 528.0) & (original description: no original description) 0.8658157770743327 12 evm.model.tig00020660.41 no hits & (original description: no original description) 0.8563244836122897 38 evm.model.tig00000204.28 (at5g02540 : 142.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G37540.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 284.0) & (original description: no original description) 0.8558091532545857 49 evm.model.tig00020830.38 no hits & (original description: no original description) 0.8513570876183155 55 evm.model.tig00001006.5 (at5g10370 : 94.0) helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related; FUNCTIONS IN: helicase activity, zinc ion binding, ATP-dependent helicase activity, nucleic acid binding, ATP binding; LOCATED IN: intracellular, chloroplast; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Zinc finger, RING-type, conserved site (InterPro:IPR017907), Domain of unknown function DUF1605 (InterPro:IPR011709), Zinc finger, C6HC-type (InterPro:IPR002867), Zinc finger, RING-type (InterPro:IPR001841), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), Zinc finger, C2H2-type (InterPro:IPR007087), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related (TAIR:AT4G01020.1); Has 13101 Blast hits to 12313 proteins in 1655 species: Archae - 17; Bacteria - 3301; Metazoa - 3520; Fungi - 1983; Plants - 1450; Viruses - 719; Other Eukaryotes - 2111 (source: NCBI BLink). & (reliability: 181.0) & (original description: no original description) 0.8457698581305434 22 evm.model.tig00000361.30 (at1g27320 : 92.8) Encodes a histidine kinases, a cytokinin receptor that controls cytokinin-mediated leaf longevity through a specific phosphorylation of the response regulator, ARR2.; histidine kinase 3 (HK3); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 2 (TAIR:AT5G35750.1); Has 124308 Blast hits to 110912 proteins in 3043 species: Archae - 772; Bacteria - 110408; Metazoa - 31; Fungi - 2185; Plants - 2022; Viruses - 28; Other Eukaryotes - 8862 (source: NCBI BLink). & (o48929|etr1_tobac : 92.0) Ethylene receptor (EC 2.7.13.3) (NT-ETR1) - Nicotiana tabacum (Common tobacco) & (reliability: 185.6) & (original description: no original description) 0.8446400957734801 43 evm.model.tig00020616.34 (at5g42620 : 211.0) metalloendopeptidases;zinc ion binding; FUNCTIONS IN: metalloendopeptidase activity, zinc ion binding; INVOLVED IN: proteolysis, cell adhesion; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EGF, extracellular (InterPro:IPR013111), EGF-like, type 3 (InterPro:IPR000742), EGF-like region, conserved site (InterPro:IPR013032), Peptidase M8, leishmanolysin (InterPro:IPR001577). & (reliability: 422.0) & (original description: no original description) 0.844069509386767 18 evm.model.tig00001254.8 no hits & (original description: no original description) 0.840331232491972 58 evm.model.tig00000911.9 no hits & (original description: no original description) 0.8382277666936614 22 evm.model.tig00000093.249 no hits & (original description: no original description) 0.8380894830755674 24 evm.model.tig00021098.23 no hits & (original description: no original description) 0.8376166444669255 24 evm.model.tig00000658.26 no hits & (original description: no original description) 0.8337163555529782 34 evm.model.tig00021290.4 no hits & (original description: no original description) 0.8323039138375808 27 evm.model.tig00021254.6 no hits & (original description: no original description) 0.8316849530065384 93 evm.model.tig00001027.14 no hits & (original description: no original description) 0.8279002980762854 58 evm.model.tig00020944.31 no hits & (original description: no original description) 0.8261284633492466 32 evm.model.tig00021135.33 no hits & (original description: no original description) 0.8257653199085708 92 evm.model.tig00020537.73 no hits & (original description: no original description) 0.8256325069757569 94 evm.model.tig00000076.56 no hits & (original description: no original description) 0.8254721389644611 35 evm.model.tig00000391.14 no hits & (original description: no original description) 0.8232511108364419 37 evm.model.tig00000829.31 (at5g10810 : 106.0) enhancer of rudimentary homolog ATER; ENHANCER OF RUDIMENTARY HOMOLOGUE (ER); CONTAINS InterPro DOMAIN/s: Enhancer of rudimentary (InterPro:IPR000781); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 212.0) & (original description: no original description) 0.8220274950448768 43 evm.model.tig00020961.12 no hits & (original description: no original description) 0.8181005506292643 40 evm.model.tig00001073.5 no hits & (original description: no original description) 0.8165607660923425 54 evm.model.tig00020944.30 no hits & (original description: no original description) 0.8144641808049116 42 evm.model.tig00020563.167 no hits & (original description: no original description) 0.8124862373157763 89 evm.model.tig00020903.54 no hits & (original description: no original description) 0.8124542475503452 47 evm.model.tig00001477.7 (at1g05460 : 266.0) Encodes a protein with similarity to RNA helicases. Mutants are defective in post-transcriptional gene silencing.; SILENCING DEFECTIVE (SDE3); FUNCTIONS IN: RNA helicase activity; INVOLVED IN: virus induced gene silencing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), DNA helicase, UvrD/REP type (InterPro:IPR000212); BEST Arabidopsis thaliana protein match is: RNA helicase, putative (TAIR:AT5G47010.1); Has 8827 Blast hits to 7137 proteins in 1206 species: Archae - 219; Bacteria - 2402; Metazoa - 1784; Fungi - 1431; Plants - 666; Viruses - 219; Other Eukaryotes - 2106 (source: NCBI BLink). & (reliability: 532.0) & (original description: no original description) 0.8112008809432136 76 evm.model.tig00021537.72 (at2g01320 : 174.0) ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G25620.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q7fmw4|pdr15_orysa : 121.0) Pleiotropic drug resistance protein 15 - Oryza sativa (Rice) & (reliability: 348.0) & (original description: no original description) 0.8104908952987671 58 evm.model.tig00021128.9 no hits & (original description: no original description) 0.8103628069268716 79 evm.model.tig00000169.40 no hits & (original description: no original description) 0.8072514232798454 53 evm.model.tig00020816.11 no hits & (original description: no original description) 0.8065143149572765 56 evm.model.tig00000383.32 (at5g13630 : 185.0) Encodes magnesium chelatase involved in plastid-to-nucleus signal transduction.; GENOMES UNCOUPLED 5 (GUN5); FUNCTIONS IN: magnesium chelatase activity; INVOLVED IN: chlorophyll biosynthetic process, biosynthetic process; LOCATED IN: mitochondrion, magnesium chelatase complex, chloroplast, chloroplast inner membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CobN/magnesium chelatase (InterPro:IPR003672), Magnesium-chelatase, subunit H (InterPro:IPR011771); Has 3665 Blast hits to 3123 proteins in 644 species: Archae - 281; Bacteria - 1903; Metazoa - 0; Fungi - 0; Plants - 92; Viruses - 0; Other Eukaryotes - 1389 (source: NCBI BLink). & (reliability: 370.0) & (original description: no original description) 0.8056310810552945 57 evm.model.tig00000241.68 no hits & (original description: no original description) 0.8035485433415462 60 evm.model.tig00021038.39 no hits & (original description: no original description) 0.7988145246400351 64 evm.model.tig00021135.25 no hits & (original description: no original description) 0.7974406509765932 69 evm.model.tig00021127.197 no hits & (original description: no original description) 0.7972528318319285 67 evm.model.tig00020675.98 no hits & (original description: no original description) 0.7964350045208795 68 evm.model.tig00021128.13 no hits & (original description: no original description) 0.7920342975404122 88 evm.model.tig00020660.61 no hits & (original description: no original description) 0.7915823459286713 75 evm.model.tig00000169.1 no hits & (original description: no original description) 0.790804201428476 77 evm.model.tig00020553.111 no hits & (original description: no original description) 0.790422791031714 78 evm.model.tig00021179.81 no hits & (original description: no original description) 0.7892409904734643 99 evm.model.tig00000841.7 (at1g10900 : 100.0) Phosphatidylinositol-4-phosphate 5-kinase family protein; FUNCTIONS IN: 1-phosphatidylinositol-4-phosphate 5-kinase activity, phosphatidylinositol phosphate kinase activity, ATP binding; INVOLVED IN: phosphatidylinositol metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup (InterPro:IPR016034), Phosphatidylinositol-4-phosphate 5-kinase, plant (InterPro:IPR017163), MORN motif (InterPro:IPR003409), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol-4-phosphate 5-kinase family protein (TAIR:AT1G60890.1); Has 26222 Blast hits to 7747 proteins in 608 species: Archae - 0; Bacteria - 3917; Metazoa - 3982; Fungi - 423; Plants - 1715; Viruses - 0; Other Eukaryotes - 16185 (source: NCBI BLink). & (q6ex42|pi5k1_orysa : 96.3) Phosphatidylinositol-4-phosphate 5-kinase 1 precursor (EC 2.7.1.68) (1-phosphatidylinositol-4-phosphate kinase) (PIP5K) (PtdIns(4)P-5-kinase) (Diphosphoinositide kinase) - Oryza sativa (Rice) & (reliability: 200.0) & (original description: no original description) 0.7886170201323308 82 evm.model.tig00000806.36 no hits & (original description: no original description) 0.7864733981361834 86 evm.model.tig00020684.46 no hits & (original description: no original description) 0.7847450178385822 96 evm.model.tig00001669.1 no hits & (original description: no original description) 0.7831233273883733 95 evm.model.tig00000227.11 no hits & (original description: no original description) 0.7824485328822661 96