Sequence Description Alias PCC hrr evm.model.tig00000553.51 no hits & (original description: no original description) 0.936785290684157 27 evm.model.tig00021534.7 no hits & (original description: no original description) 0.934664975683118 15 evm.model.tig00000823.16 (at4g31210 : 179.0) DNA topoisomerase, type IA, core; FUNCTIONS IN: DNA topoisomerase activity, DNA topoisomerase type I activity, DNA binding, nucleic acid binding; INVOLVED IN: DNA topological change, DNA unwinding involved in replication, DNA metabolic process; LOCATED IN: chromosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA topoisomerase, type IA, zn finger (InterPro:IPR013498), DNA topoisomerase, type IA, core (InterPro:IPR000380), DNA topoisomerase, type IA, DNA-binding (InterPro:IPR003602), DNA topoisomerase, type IA, domain 2 (InterPro:IPR003601), DNA topoisomerase, type IA, central (InterPro:IPR013497), DNA topoisomerase, type IA, central region, subdomain 3 (InterPro:IPR013826), DNA topoisomerase I, bacterial-type (InterPro:IPR005733), Toprim domain, subgroup (InterPro:IPR006154), DNA topoisomerase, type IA, central region, subdomain 1 (InterPro:IPR013824), Toprim domain (InterPro:IPR006171); BEST Arabidopsis thaliana protein match is: topoisomerase 3alpha (TAIR:AT5G63920.1); Has 21441 Blast hits to 18441 proteins in 2923 species: Archae - 440; Bacteria - 10015; Metazoa - 1777; Fungi - 750; Plants - 256; Viruses - 35; Other Eukaryotes - 8168 (source: NCBI BLink). & (reliability: 358.0) & (original description: no original description) 0.9333169206110832 20 evm.model.tig00001292.23 no hits & (original description: no original description) 0.9278697465459494 21 evm.model.tig00020660.23 (at4g10180 : 270.0) Encodes a nuclear-localized protein that acts as a repressor of photomorphogenesis and may be involved in chromatin remodeling.; DE-ETIOLATED 1 (DET1); FUNCTIONS IN: catalytic activity; INVOLVED IN: DNA repair, negative regulation of photomorphogenesis; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: De-etiolated protein 1, Det1 (InterPro:IPR019138), Six-hairpin glycosidase-like (InterPro:IPR008928); Has 248 Blast hits to 240 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 106; Fungi - 0; Plants - 132; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 540.0) & (original description: no original description) 0.9265518722443938 23 evm.model.tig00020848.40 no hits & (original description: no original description) 0.9254211464746194 10 evm.model.tig00020556.3 (at3g46960 : 85.9) RNA helicase, ATP-dependent, SK12/DOB1 protein; FUNCTIONS IN: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides, helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DSH, C-terminal (InterPro:IPR012961), DEAD-like helicase, N-terminal (InterPro:IPR014001), RNA helicase, ATP-dependent, SK12/DOB1 (InterPro:IPR016438), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase, ATP-dependent, SK12/DOB1 protein (TAIR:AT1G59760.1); Has 10417 Blast hits to 7271 proteins in 1110 species: Archae - 777; Bacteria - 3025; Metazoa - 1455; Fungi - 1476; Plants - 602; Viruses - 48; Other Eukaryotes - 3034 (source: NCBI BLink). & (reliability: 166.4) & (original description: no original description) 0.923973622649873 33 evm.model.tig00000981.14 (at2g36390 : 474.0) Encodes a starch branching enzyme (EC.2.4.1.18) similar to SBE2 from maize and rice. Expressed throughout plant tissues.; starch branching enzyme 2.1 (SBE2.1); FUNCTIONS IN: 1,4-alpha-glucan branching enzyme activity; INVOLVED IN: amylopectin biosynthetic process, starch metabolic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 13, N-terminal (InterPro:IPR004193), Immunoglobulin E-set (InterPro:IPR014756), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Alpha-amylase, C-terminal all beta (InterPro:IPR006048), Immunoglobulin-like fold (InterPro:IPR013783), Glycosyl hydrolase, family 13, all-beta (InterPro:IPR013780), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047); BEST Arabidopsis thaliana protein match is: starch branching enzyme 2.2 (TAIR:AT5G03650.1); Has 15972 Blast hits to 15848 proteins in 2360 species: Archae - 125; Bacteria - 12355; Metazoa - 437; Fungi - 446; Plants - 1422; Viruses - 0; Other Eukaryotes - 1187 (source: NCBI BLink). & (q08047|glgb_maize : 404.0) 1,4-alpha-glucan branching enzyme IIB, chloroplast precursor (EC 2.4.1.18) (Starch branching enzyme IIB) (Q-enzyme) - Zea mays (Maize) & (reliability: 948.0) & (original description: no original description) 0.9212575593503731 51 evm.model.tig00020614.33 (at1g60995 : 165.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Membralin (InterPro:IPR019144); Has 172 Blast hits to 170 proteins in 70 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (reliability: 330.0) & (original description: no original description) 0.921152681894978 44 evm.model.tig00000241.126 no hits & (original description: no original description) 0.9201032325811449 50 evm.model.tig00020908.14 no hits & (original description: no original description) 0.9166953937428973 59 evm.model.tig00001215.4 no hits & (original description: no original description) 0.9159456424248441 63 evm.model.tig00021318.53 no hits & (original description: no original description) 0.9152437749900282 35 evm.model.tig00020816.36 no hits & (original description: no original description) 0.9142341591656706 63 evm.model.tig00021037.10 no hits & (original description: no original description) 0.9141580165406927 94 evm.model.tig00000900.35 (at1g51350 : 201.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid lumen; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); Has 1374 Blast hits to 1058 proteins in 203 species: Archae - 0; Bacteria - 0; Metazoa - 493; Fungi - 490; Plants - 280; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). & (reliability: 402.0) & (original description: no original description) 0.9128734172241987 26 evm.model.tig00000441.14 no hits & (original description: no original description) 0.91124149218279 77 evm.model.tig00000792.8 no hits & (original description: no original description) 0.911062991902154 24 evm.model.tig00000042.165 no hits & (original description: no original description) 0.909548796403763 23 evm.model.tig00000403.88 no hits & (original description: no original description) 0.9093679932052258 30 evm.model.tig00000857.24 (at5g23630 : 129.0) A member of the eukaryotic type V subfamily (P5) of P-type ATPase cation pumps; MIA is most similar to the human P5 ATPase ATY2(44% identity) and to Spf1p from S. cerevisiae (41% identity). Highly abundant in the endoplasmic reticulum and small vesicles of developing pollen grains and tapetum cells. T-DNA insertional mutants of MIA suffer from imbalances in cation homeostasis and exhibit a severe reduction in fertility. Mutant microspores fail to separate from tetrads and pollen grains are fragile with an abnormal morphology and altered cell wall structure. MIA is also named PDR2 and was shown to be required for proper expression of SCARECROW (SCR), a key regulator of root patterning, and for stem-cell maintenance in Pi-deprived roots.; phosphate deficiency response 2 (PDR2); FUNCTIONS IN: cation-transporting ATPase activity; INVOLVED IN: in 6 processes; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, unknown pump specificity (type V) (InterPro:IPR006544), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: calcium ATPase 2 (TAIR:AT4G37640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 258.0) & (original description: no original description) 0.9093196488037673 94 evm.model.tig00020553.68 (at5g40200 : 238.0) Encodes a putative DegP protease.; DegP protease 9 (DegP9); FUNCTIONS IN: serine-type peptidase activity, catalytic activity, serine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: nucleolus, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Serine/cysteine peptidase, trypsin-like (InterPro:IPR009003), Serine endopeptidase DegP2 (InterPro:IPR015724), Peptidase S1C, HrtA/DegP2/Q/S (InterPro:IPR001940), Peptidase S1/S6, chymotrypsin/Hap (InterPro:IPR001254), PDZ/DHR/GLGF (InterPro:IPR001478); BEST Arabidopsis thaliana protein match is: DEGP protease 2 (TAIR:AT2G47940.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 476.0) & (original description: no original description) 0.9087529298298765 77 evm.model.tig00001284.13 no hits & (original description: no original description) 0.9082728383856722 37 evm.model.tig00021537.35 no hits & (original description: no original description) 0.9080337029526757 44 evm.model.tig00000448.86 (at4g26270 : 317.0) phosphofructokinase 3 (PFK3); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 7 (TAIR:AT5G56630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 634.0) & (original description: no original description) 0.9071809632099995 29 evm.model.tig00020710.80 no hits & (original description: no original description) 0.9059884600059019 67 evm.model.tig00020909.28 no hits & (original description: no original description) 0.90313377534075 100 evm.model.tig00000241.175 (at1g75660 : 257.0) Encodes a protein with similarity to yeast 5'-3'exonucleases and can functionally complement the yeast mutations. In Arabidopsis XRN3 acts as a suppressor of posttranscriptional gene silencing. Mutants accumulate excised miRNA products suggesting that XRN3 is involved in degradation of these products.; 5'-3' exoribonuclease 3 (XRN3); CONTAINS InterPro DOMAIN/s: 5'-3' exoribonuclease 2 (InterPro:IPR017151), Zinc finger, CCHC-type (InterPro:IPR001878), Putative 5-3 exonuclease (InterPro:IPR004859); BEST Arabidopsis thaliana protein match is: exoribonuclease 2 (TAIR:AT5G42540.1); Has 4264 Blast hits to 3505 proteins in 442 species: Archae - 2; Bacteria - 295; Metazoa - 1361; Fungi - 725; Plants - 751; Viruses - 31; Other Eukaryotes - 1099 (source: NCBI BLink). & (reliability: 514.0) & (original description: no original description) 0.9025970364130467 89 evm.model.tig00021434.26 no hits & (original description: no original description) 0.9016040311956204 36 evm.model.tig00020629.137 no hits & (original description: no original description) 0.8983291647300953 43 evm.model.tig00020560.13 no hits & (original description: no original description) 0.8981497520939191 44 evm.model.tig00021462.19 (at4g18950 : 82.0) Integrin-linked protein kinase family; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: regulation of signal transduction, protein amino acid phosphorylation; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Integrin-linked protein kinase (InterPro:IPR016253), Ankyrin repeat-containing domain (InterPro:IPR020683), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Integrin-linked protein kinase family (TAIR:AT3G58760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 164.0) & (original description: no original description) 0.8969663165114562 59 evm.model.tig00021319.6 no hits & (original description: no original description) 0.8969536735841217 46 evm.model.tig00000459.5 no hits & (original description: no original description) 0.8964052648141801 70 evm.model.tig00020704.15 no hits & (original description: no original description) 0.8963881033750826 48 evm.model.tig00000663.26 no hits & (original description: no original description) 0.8957999584097184 64 evm.model.tig00000042.236 (at1g27320 : 119.0) Encodes a histidine kinases, a cytokinin receptor that controls cytokinin-mediated leaf longevity through a specific phosphorylation of the response regulator, ARR2.; histidine kinase 3 (HK3); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 2 (TAIR:AT5G35750.1); Has 124308 Blast hits to 110912 proteins in 3043 species: Archae - 772; Bacteria - 110408; Metazoa - 31; Fungi - 2185; Plants - 2022; Viruses - 28; Other Eukaryotes - 8862 (source: NCBI BLink). & (o48929|etr1_tobac : 94.0) Ethylene receptor (EC 2.7.13.3) (NT-ETR1) - Nicotiana tabacum (Common tobacco) & (reliability: 238.0) & (original description: no original description) 0.8955650290214588 78 evm.model.tig00001493.4 (at1g75660 : 95.1) Encodes a protein with similarity to yeast 5'-3'exonucleases and can functionally complement the yeast mutations. In Arabidopsis XRN3 acts as a suppressor of posttranscriptional gene silencing. Mutants accumulate excised miRNA products suggesting that XRN3 is involved in degradation of these products.; 5'-3' exoribonuclease 3 (XRN3); CONTAINS InterPro DOMAIN/s: 5'-3' exoribonuclease 2 (InterPro:IPR017151), Zinc finger, CCHC-type (InterPro:IPR001878), Putative 5-3 exonuclease (InterPro:IPR004859); BEST Arabidopsis thaliana protein match is: exoribonuclease 2 (TAIR:AT5G42540.1); Has 4264 Blast hits to 3505 proteins in 442 species: Archae - 2; Bacteria - 295; Metazoa - 1361; Fungi - 725; Plants - 751; Viruses - 31; Other Eukaryotes - 1099 (source: NCBI BLink). & (reliability: 190.2) & (original description: no original description) 0.8939148876518458 65 evm.model.tig00000350.11 no hits & (original description: no original description) 0.8937848576021278 96 evm.model.tig00021126.26 no hits & (original description: no original description) 0.8923165175928253 89 evm.model.tig00020965.66 no hits & (original description: no original description) 0.8921756399922227 90 evm.model.tig00020553.208 no hits & (original description: no original description) 0.8919774369830634 64 evm.model.tig00021522.8 no hits & (original description: no original description) 0.8915192919250007 80 evm.model.tig00020849.35 no hits & (original description: no original description) 0.8880285501133511 77 evm.model.tig00000147.51 no hits & (original description: no original description) 0.8864346321001738 84 evm.model.tig00000718.23 (at4g24020 : 84.0) Encodes NIN Like Protein 7 (NLP7). Modulates nitrate sensing and metabolism. Mutants of NLP7 show features of nitrogen-starved plants and are tolerant to drought stress. Localized in the nucleus and functions as a putative transcription factor.; NIN like protein 7 (NLP7); CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Plant regulator RWP-RK (InterPro:IPR003035); BEST Arabidopsis thaliana protein match is: Plant regulator RWP-RK family protein (TAIR:AT1G64530.1); Has 724 Blast hits to 614 proteins in 51 species: Archae - 0; Bacteria - 2; Metazoa - 5; Fungi - 15; Plants - 632; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). & (reliability: 168.0) & (original description: no original description) 0.8830518673642859 96