Sequence Description Alias PCC hrr evm.model.tig00000133.51 no hits & (original description: no original description) 0.9243225466105991 35 evm.model.tig00001542.23 "(at5g08190 : 140.0) ""nuclear factor Y, subunit B12"" (NF-YB12); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit B13 (TAIR:AT5G23090.4); Has 1494 Blast hits to 1494 proteins in 245 species: Archae - 0; Bacteria - 0; Metazoa - 489; Fungi - 378; Plants - 520; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). & (reliability: 280.0) & (original description: no original description)" 0.9184975192550099 17 evm.model.tig00000144.125 (at3g18430 : 116.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992); BEST Arabidopsis thaliana protein match is: calmodulin 9 (TAIR:AT3G51920.1). & (p04464|calm_wheat : 80.5) Calmodulin (CaM) - Triticum aestivum (Wheat) & (reliability: 232.0) & (original description: no original description) 0.91410937103211 33 evm.model.tig00020531.56 no hits & (original description: no original description) 0.9073089596326885 21 evm.model.tig00000882.25 no hits & (original description: no original description) 0.9054652300337953 36 evm.model.tig00000944.55 no hits & (original description: no original description) 0.9046628515363566 71 evm.model.tig00000551.18 no hits & (original description: no original description) 0.9015447221602484 61 evm.model.tig00001532.9 no hits & (original description: no original description) 0.9014997578225422 36 evm.model.tig00000704.72 no hits & (original description: no original description) 0.8991183025180997 39 evm.model.tig00001487.15 no hits & (original description: no original description) 0.8985886024999326 17 evm.model.tig00000350.34 no hits & (original description: no original description) 0.897407142444759 57 evm.model.tig00020904.76 no hits & (original description: no original description) 0.89736706168345 18 evm.model.tig00000411.74 no hits & (original description: no original description) 0.8973166249946853 44 evm.model.tig00000342.15 (at1g60890 : 95.5) Phosphatidylinositol-4-phosphate 5-kinase family protein; FUNCTIONS IN: 1-phosphatidylinositol-4-phosphate 5-kinase activity, phosphatidylinositol phosphate kinase activity, ATP binding; INVOLVED IN: phosphatidylinositol metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup (InterPro:IPR016034), Phosphatidylinositol-4-phosphate 5-kinase, plant (InterPro:IPR017163), MORN motif (InterPro:IPR003409), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol-4-phosphate 5-kinase family protein (TAIR:AT1G10900.1). & (q6ex42|pi5k1_orysa : 91.3) Phosphatidylinositol-4-phosphate 5-kinase 1 precursor (EC 2.7.1.68) (1-phosphatidylinositol-4-phosphate kinase) (PIP5K) (PtdIns(4)P-5-kinase) (Diphosphoinositide kinase) - Oryza sativa (Rice) & (reliability: 191.0) & (original description: no original description) 0.8929776909422923 57 evm.model.tig00021135.24 no hits & (original description: no original description) 0.8911464055699854 46 evm.model.tig00000093.81 no hits & (original description: no original description) 0.8903480588233732 45 evm.model.tig00000806.51 no hits & (original description: no original description) 0.8872033397300192 19 evm.model.tig00020927.50 (at1g21190 : 115.0) Small nuclear ribonucleoprotein family protein; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: Small nuclear ribonucleoprotein family protein (TAIR:AT1G76860.1); Has 1267 Blast hits to 1267 proteins in 306 species: Archae - 319; Bacteria - 0; Metazoa - 370; Fungi - 215; Plants - 174; Viruses - 0; Other Eukaryotes - 189 (source: NCBI BLink). & (reliability: 230.0) & (original description: no original description) 0.8870059807609328 46 evm.model.tig00000042.105 no hits & (original description: no original description) 0.8840307334700407 93 evm.model.tig00000269.28 no hits & (original description: no original description) 0.8830855865379765 42 evm.model.tig00020538.71 (at1g17440 : 110.0) Encodes one of two Arabidopsis proteins with similarity to the TBP-associated factor TAF12. The gene product is an EIN3-interacting TFIID transcription factor required for proper ethylene response, including ERF1 induction. Loss of function mutants show enhanced response to ethylene. Located in nucleus and expressed throughout the plant. Required for ERF1 expression.; ENHANCED ETHYLENE RESPONSE 4 (EER4); FUNCTIONS IN: DNA binding, transcription initiation factor activity; INVOLVED IN: regulation of ethylene mediated signaling pathway, jasmonic acid mediated signaling pathway, transcription initiation; LOCATED IN: nucleus, transcription factor TFIID complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription initiation factor TFIID (InterPro:IPR003228), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: TBP-associated factor 12 (TAIR:AT3G10070.1); Has 83508 Blast hits to 36935 proteins in 1541 species: Archae - 40; Bacteria - 5554; Metazoa - 31214; Fungi - 9645; Plants - 6795; Viruses - 322; Other Eukaryotes - 29938 (source: NCBI BLink). & (reliability: 220.0) & (original description: no original description) 0.8828364605460857 58 evm.model.tig00000158.19 no hits & (original description: no original description) 0.8825222226055734 52 evm.model.tig00020723.69 no hits & (original description: no original description) 0.8825134030339808 90 evm.model.tig00021589.12 (at5g51940 : 113.0) One of two highly similar proteins that can serve as a non-catalytic subunit of nuclear DNA-dependent RNA polymerases II, IV and V; homologous to budding yeast RPB6 and the E. coli RNA polymerase omega subunit. Probably redundant with At2g04630.; NRPB6A; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription, DNA-dependent; LOCATED IN: DNA-directed RNA polymerase V complex, DNA-directed RNA polymerase II, core complex, DNA-directed RNA polymerase IV complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, 14-18kDa subunit, conserved site (InterPro:IPR020708), RNA polymerase subunit, RPB6/omega (InterPro:IPR012293), RNA polymerase Rpb6 (InterPro:IPR006110), DNA-directed RNA polymerase, 14-18kDa subunit (InterPro:IPR006111); BEST Arabidopsis thaliana protein match is: RNA polymerase Rpb6 (TAIR:AT2G04630.1); Has 907 Blast hits to 906 proteins in 313 species: Archae - 223; Bacteria - 0; Metazoa - 99; Fungi - 194; Plants - 79; Viruses - 16; Other Eukaryotes - 296 (source: NCBI BLink). & (reliability: 226.0) & (original description: no original description) 0.8803057777512583 84 evm.model.tig00000704.43 no hits & (original description: no original description) 0.8795598710328723 41 evm.model.tig00020780.31 (original description: no original description) 0.8788995927370554 76 evm.model.tig00021127.36 no hits & (original description: no original description) 0.8782366812707975 88 evm.model.tig00021432.33 (at5g49400 : 98.2) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878); Has 46316 Blast hits to 20637 proteins in 1119 species: Archae - 19; Bacteria - 12274; Metazoa - 18717; Fungi - 3822; Plants - 2024; Viruses - 338; Other Eukaryotes - 9122 (source: NCBI BLink). & (reliability: 196.4) & (original description: no original description) 0.8781694790240229 52 evm.model.tig00001532.8 no hits & (original description: no original description) 0.8764064326263488 54 evm.model.tig00000241.37 (at5g09920 : 94.0) Non-catalytic subunit specific to DNA-dependent RNA polymerase II; the ortholog of budding yeast RPB4); NRPB4; CONTAINS InterPro DOMAIN/s: HRDC-like (InterPro:IPR010997), RNA polymerase II, Rpb4 (InterPro:IPR005574), RNA polymerase II, Rpb4, core (InterPro:IPR006590); BEST Arabidopsis thaliana protein match is: RNA polymerase II, Rpb4, core protein (TAIR:AT4G15950.1); Has 441 Blast hits to 441 proteins in 181 species: Archae - 4; Bacteria - 0; Metazoa - 144; Fungi - 150; Plants - 95; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). & (reliability: 188.0) & (original description: no original description) 0.8752821979321097 74 evm.model.tig00000545.9 no hits & (original description: no original description) 0.8748387286369819 92 evm.model.tig00000737.30 no hits & (original description: no original description) 0.8747318470157114 59 evm.model.tig00000144.178 (at3g18430 : 121.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992); BEST Arabidopsis thaliana protein match is: calmodulin 9 (TAIR:AT3G51920.1). & (reliability: 242.0) & (original description: no original description) 0.8732443683620225 48 evm.model.tig00000796.18 no hits & (original description: no original description) 0.872674724971689 38 evm.model.tig00021127.195 no hits & (original description: no original description) 0.8699508298961871 85 evm.model.tig00000383.114 no hits & (original description: no original description) 0.8694350968472733 82 evm.model.tig00000789.43 no hits & (original description: no original description) 0.8688476483497374 79 evm.model.tig00000655.49 (at5g19490 : 100.0) Histone superfamily protein; FUNCTIONS IN: sequence-specific DNA binding, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit C11 (TAIR:AT3G12480.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 194.2) & (original description: no original description) 0.868090820216463 73 evm.model.tig00000319.30 no hits & (original description: no original description) 0.8675877859090045 69 evm.model.tig00020531.40 no hits & (original description: no original description) 0.8602403135107469 86 evm.model.tig00000133.2 (at1g26550 : 137.0) FKBP-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: isomerase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-prolyl cis-trans isomerase, PpiC-type (InterPro:IPR000297); BEST Arabidopsis thaliana protein match is: peptidylprolyl cis/trans isomerase, NIMA-interacting 1 (TAIR:AT2G18040.1); Has 6979 Blast hits to 6709 proteins in 1619 species: Archae - 14; Bacteria - 5328; Metazoa - 276; Fungi - 185; Plants - 213; Viruses - 0; Other Eukaryotes - 963 (source: NCBI BLink). & (reliability: 274.0) & (original description: no original description) 0.859759005117915 53 evm.model.tig00020723.11 no hits & (original description: no original description) 0.8576925885153746 64 evm.model.tig00021319.68 (at1g61780 : 93.2) postsynaptic protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Microtubule-associated protein CRIPT (InterPro:IPR019367); Has 230 Blast hits to 228 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 116; Fungi - 46; Plants - 56; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 186.4) & (original description: no original description) 0.857243467208952 60 evm.model.tig00020918.10 no hits & (original description: no original description) 0.8568140309543859 59 evm.model.tig00021612.34 no hits & (original description: no original description) 0.8550874437390844 73 evm.model.tig00000037.36 no hits & (original description: no original description) 0.8545973919612424 98 evm.model.tig00000704.54 "(at4g14540 : 106.0) ""nuclear factor Y, subunit B3"" (NF-YB3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, CBFA/NFYB, DNA topoisomerase (InterPro:IPR003957), Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072), Transcription factor, NFYB/HAP3, conserved site (InterPro:IPR003956); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit B2 (TAIR:AT5G47640.1); Has 1532 Blast hits to 1532 proteins in 250 species: Archae - 0; Bacteria - 1; Metazoa - 503; Fungi - 375; Plants - 529; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (p25209|nfyb_maize : 105.0) Nuclear transcription factor Y subunit B (NF-YB) (CAAT-box DNA-binding protein subunit B) - Zea mays (Maize) & (reliability: 212.0) & (original description: no original description)" 0.8542619500087961 100 evm.model.tig00000076.116 no hits & (original description: no original description) 0.8538907714393926 66 evm.model.tig00001249.11 no hits & (original description: no original description) 0.8534005900739351 89 evm.model.tig00020531.47 no hits & (original description: no original description) 0.8493218000580309 75 evm.model.tig00000194.34 no hits & (original description: no original description) 0.8459070820596747 78 evm.model.tig00000057.73 no hits & (original description: no original description) 0.8457892568294012 84 evm.model.tig00021137.23 no hits & (original description: no original description) 0.8437463355579705 84 evm.model.tig00000076.92 no hits & (original description: no original description) 0.8416316509997751 87 evm.model.tig00021591.9 no hits & (original description: no original description) 0.8402916257910459 90 evm.model.tig00021617.21 no hits & (original description: no original description) 0.8399453095817566 100 evm.model.tig00000939.13 no hits & (original description: no original description) 0.8396352449959666 92