Sequence Description Alias PCC hrr evm.model.tig00020912.86 (at1g08600 : 154.0) ATRX; FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: homolog of RAD54 (TAIR:AT3G19210.1). & (q7g8y3|isw2_orysa : 84.7) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 308.0) & (original description: no original description) 0.9589085517787517 1 evm.model.tig00000219.66 no hits & (original description: no original description) 0.9428831852964338 2 evm.model.tig00021015.4 no hits & (original description: no original description) 0.9380224283138033 5 evm.model.tig00021504.9 no hits & (original description: no original description) 0.9345851892816829 5 evm.model.tig00020943.98 no hits & (original description: no original description) 0.9337548231690841 12 evm.model.tig00020592.15 no hits & (original description: no original description) 0.9330009172974251 13 evm.model.tig00020629.19 no hits & (original description: no original description) 0.9296253642466963 31 evm.model.tig00020685.41 no hits & (original description: no original description) 0.9278263980179289 8 evm.model.tig00000984.6 no hits & (original description: no original description) 0.9264313641273423 9 evm.model.tig00020848.87 no hits & (original description: no original description) 0.925782371023613 10 evm.model.tig00021043.3 no hits & (original description: no original description) 0.9252977975609014 55 evm.model.tig00000057.20 no hits & (original description: no original description) 0.9243254240885006 12 evm.model.tig00021127.97 no hits & (original description: no original description) 0.9242257265205046 13 evm.model.tig00021073.2 no hits & (original description: no original description) 0.9231192343468073 14 evm.model.tig00000552.22 no hits & (original description: no original description) 0.921731858624257 40 evm.model.tig00000385.14 no hits & (original description: no original description) 0.9208007447234898 16 evm.model.tig00000852.25 no hits & (original description: no original description) 0.9192314114556451 61 evm.model.tig00021569.15 no hits & (original description: no original description) 0.9174508606725735 18 evm.model.tig00000788.2 no hits & (original description: no original description) 0.9168706275014905 19 evm.model.tig00000203.26 no hits & (original description: no original description) 0.9147345470980461 20 evm.model.tig00020553.250 no hits & (original description: no original description) 0.9143859436254768 65 evm.model.tig00000803.5 no hits & (original description: no original description) 0.914371065123787 57 evm.model.tig00000042.27 no hits & (original description: no original description) 0.9143549322754358 88 evm.model.tig00021720.19 (at1g75660 : 283.0) Encodes a protein with similarity to yeast 5'-3'exonucleases and can functionally complement the yeast mutations. In Arabidopsis XRN3 acts as a suppressor of posttranscriptional gene silencing. Mutants accumulate excised miRNA products suggesting that XRN3 is involved in degradation of these products.; 5'-3' exoribonuclease 3 (XRN3); CONTAINS InterPro DOMAIN/s: 5'-3' exoribonuclease 2 (InterPro:IPR017151), Zinc finger, CCHC-type (InterPro:IPR001878), Putative 5-3 exonuclease (InterPro:IPR004859); BEST Arabidopsis thaliana protein match is: exoribonuclease 2 (TAIR:AT5G42540.1); Has 4264 Blast hits to 3505 proteins in 442 species: Archae - 2; Bacteria - 295; Metazoa - 1361; Fungi - 725; Plants - 751; Viruses - 31; Other Eukaryotes - 1099 (source: NCBI BLink). & (reliability: 566.0) & (original description: no original description) 0.91271002282339 63 evm.model.tig00020685.5 no hits & (original description: no original description) 0.9124462542716527 29 evm.model.tig00000385.17 no hits & (original description: no original description) 0.9112480686871728 91 evm.model.tig00020713.4 no hits & (original description: no original description) 0.9092783534176597 27 evm.model.tig00021521.9 no hits & (original description: no original description) 0.9087192082671851 34 evm.model.tig00020801.89 no hits & (original description: no original description) 0.9084741027647544 30 evm.model.tig00000215.35 (at2g35920 : 234.0) RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G04895.1); Has 15667 Blast hits to 10761 proteins in 1709 species: Archae - 0; Bacteria - 5024; Metazoa - 4470; Fungi - 1848; Plants - 1329; Viruses - 777; Other Eukaryotes - 2219 (source: NCBI BLink). & (reliability: 424.0) & (original description: no original description) 0.9081676469713486 38 evm.model.tig00021037.62 no hits & (original description: no original description) 0.9077706462478895 41 evm.model.tig00021070.62 no hits & (original description: no original description) 0.9058177081500779 34 evm.model.tig00020892.23 (at5g35930 : 80.1) AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: phosphopantetheine binding, acyl carrier activity, catalytic activity, AMP binding, cofactor binding; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphopantetheine-binding (InterPro:IPR006163), Pyrrolo-quinoline quinone beta-propeller repeat (InterPro:IPR018391), Pyrrolo-quinoline quinone repeat (InterPro:IPR002372), AMP-dependent synthetase/ligase (InterPro:IPR000873), Phosphopantetheine attachment site (InterPro:IPR006162), Acyl carrier protein-like (InterPro:IPR009081), AMP-binding, conserved site (InterPro:IPR020845), Quinonprotein alcohol dehydrogenase-like (InterPro:IPR011047); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT3G16170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 160.2) & (original description: no original description) 0.9054614167896406 35 evm.model.tig00000842.27 no hits & (original description: no original description) 0.9051539952877566 36 evm.model.tig00020614.82 no hits & (original description: no original description) 0.9035163275515814 55 evm.model.tig00000385.29 no hits & (original description: no original description) 0.9033605953096576 44 evm.model.tig00001388.14 no hits & (original description: no original description) 0.9030155098605614 40 evm.model.tig00021127.143 no hits & (original description: no original description) 0.9029941069365843 41 evm.model.tig00000430.78 no hits & (original description: no original description) 0.9007408762983358 42 evm.model.tig00000882.1 (at4g32700 : 271.0) Encodes a homolog of Drosophila MUS308 and mammalian DNA polymerase, which prevent spontaneous or DNA damage-induced production of DNA double strand breaks. Two conserved functional domains: an N-terminal superfamily II DNA/RNA helicase domain and a C-terminal prokaryotic-type DNA polymerase I domain. Required for regulated cell division and differentiation in meristems. Mutant plants show morphological defects, such as short roots, serrated leaves, and fasciation, as well as defective patterns of cell division and differentiation in the meristem. Mutant plants had 2.5 to 4.5-fold higher expression of ATGR1, ATBRCA1 and RAD51 genes. TEB is required for normal progression of DNA replication and for correct expression of genes during development.; helicases;ATP-dependent helicases;nucleic acid binding;ATP binding;DNA-directed DNA polymerases;DNA binding; FUNCTIONS IN: in 6 functions; INVOLVED IN: regulation of gene expression, DNA replication, DNA recombination, photomorphogenesis; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA-directed DNA polymerase, family A, palm domain (InterPro:IPR001098), DNA/RNA helicase, C-terminal (InterPro:IPR001650), DNA polymerase A domain (InterPro:IPR002298), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: U5 small nuclear ribonucleoprotein helicase (TAIR:AT2G42270.1); Has 17628 Blast hits to 16579 proteins in 2941 species: Archae - 600; Bacteria - 7507; Metazoa - 1254; Fungi - 1190; Plants - 590; Viruses - 412; Other Eukaryotes - 6075 (source: NCBI BLink). & (reliability: 542.0) & (original description: no original description) 0.900705907708606 43 evm.model.tig00000663.73 no hits & (original description: no original description) 0.8990194999329202 46 evm.model.tig00020562.34 no hits & (original description: no original description) 0.8983931239470365 47 evm.model.tig00000767.1 no hits & (original description: no original description) 0.8969698500963396 49 evm.model.tig00000658.40 no hits & (original description: no original description) 0.8960608824446464 92 evm.model.tig00000144.58 no hits & (original description: no original description) 0.895175840131061 52 evm.model.tig00020563.170 no hits & (original description: no original description) 0.8949095442377619 60 evm.model.tig00001373.6 (at5g48960 : 101.0) HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase; FUNCTIONS IN: 5'-nucleotidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase (InterPro:IPR008380); BEST Arabidopsis thaliana protein match is: HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase (TAIR:AT1G75210.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 191.8) & (original description: no original description) 0.8948604488461605 55 evm.model.tig00020553.81 no hits & (original description: no original description) 0.8935967216906311 97 evm.model.tig00000158.93 (at1g27320 : 149.0) Encodes a histidine kinases, a cytokinin receptor that controls cytokinin-mediated leaf longevity through a specific phosphorylation of the response regulator, ARR2.; histidine kinase 3 (HK3); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 2 (TAIR:AT5G35750.1); Has 124308 Blast hits to 110912 proteins in 3043 species: Archae - 772; Bacteria - 110408; Metazoa - 31; Fungi - 2185; Plants - 2022; Viruses - 28; Other Eukaryotes - 8862 (source: NCBI BLink). & (q9m7m1|etr1_prupe : 128.0) Ethylene receptor (EC 2.7.13.3) - Prunus persica (Peach) & (reliability: 298.0) & (original description: no original description) 0.892537221433082 87 evm.model.tig00000989.33 no hits & (original description: no original description) 0.892449962662898 60 evm.model.tig00020684.5 no hits & (original description: no original description) 0.8903156611631181 63 evm.model.tig00021244.32 (at1g53710 : 93.2) Calcineurin-like metallo-phosphoesterase superfamily protein; FUNCTIONS IN: hydrolase activity, protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843); Has 733 Blast hits to 717 proteins in 171 species: Archae - 5; Bacteria - 24; Metazoa - 239; Fungi - 230; Plants - 210; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 186.4) & (original description: no original description) 0.8899272432328404 64 evm.model.tig00000144.47 (at1g27840 : 100.0) Encodes a DDB1a interacting protein ATCSA-1 required for UV-B tolerance and genomic integrity.; ATCSA-1; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G19750.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 200.0) & (original description: no original description) 0.8898779575859522 80 evm.model.tig00021348.21 (at2g31870 : 108.0) mutant has Long free-running circadian period; Poly (ADP-ribose) Glycohydrolase; Sanskrit for 'bright' (TEJ); CONTAINS InterPro DOMAIN/s: Poly(ADP-ribose) glycohydrolase (InterPro:IPR007724); BEST Arabidopsis thaliana protein match is: poly(ADP-ribose) glycohydrolase 2 (TAIR:AT2G31865.2); Has 549 Blast hits to 374 proteins in 97 species: Archae - 0; Bacteria - 0; Metazoa - 324; Fungi - 12; Plants - 58; Viruses - 0; Other Eukaryotes - 155 (source: NCBI BLink). & (reliability: 216.0) & (original description: no original description) 0.8894977974401915 66 evm.model.tig00020556.92 no hits & (original description: no original description) 0.8893331730683862 67 evm.model.tig00001278.5 no hits & (original description: no original description) 0.8882436236398065 68 evm.model.tig00021037.68 (at1g26240 : 107.0) Proline-rich extensin-like family protein; FUNCTIONS IN: structural constituent of cell wall; INVOLVED IN: plant-type cell wall organization; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Extensin-like repeat (InterPro:IPR006706); BEST Arabidopsis thaliana protein match is: Proline-rich extensin-like family protein (TAIR:AT4G08370.1); Has 364257 Blast hits to 37887 proteins in 1520 species: Archae - 1099; Bacteria - 63371; Metazoa - 128573; Fungi - 46566; Plants - 64812; Viruses - 9875; Other Eukaryotes - 49961 (source: NCBI BLink). & (q9fpq6|gp1_chlre : 101.0) Vegetative cell wall protein gp1 precursor (Hydroxyproline-rich glycoprotein 1) - Chlamydomonas reinhardtii & (reliability: 192.6) & (original description: no original description) 0.8881443555503785 78 evm.model.tig00000128.10 no hits & (original description: no original description) 0.8876764596225276 70 evm.model.tig00001187.24 no hits & (original description: no original description) 0.8872510917753221 83 evm.model.tig00021012.16 no hits & (original description: no original description) 0.8864219866491847 75 evm.model.tig00000767.3 no hits & (original description: no original description) 0.8862324901427243 76 evm.model.tig00001668.9 no hits & (original description: no original description) 0.8842386159360746 81 evm.model.tig00000507.19 (at3g59950 : 109.0) Peptidase family C54 protein; FUNCTIONS IN: peptidase activity; INVOLVED IN: autophagy; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C54 (InterPro:IPR005078); BEST Arabidopsis thaliana protein match is: Peptidase family C54 protein (TAIR:AT2G44140.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 218.0) & (original description: no original description) 0.8838097320507676 82 evm.model.tig00000325.7 no hits & (original description: no original description) 0.8837321959895693 83 evm.model.tig00000711.11 (at3g01380 : 230.0) transferases;sulfuric ester hydrolases;catalytics;transferases; FUNCTIONS IN: sulfuric ester hydrolase activity, transferase activity, catalytic activity; INVOLVED IN: GPI anchor biosynthetic process, metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GPI ethanolamine phosphate transferase 1, C-terminal (InterPro:IPR017852), Alkaline phosphatase-like, alpha/beta/alpha (InterPro:IPR017849), GPI ethanolamine phosphate transferase 1 (InterPro:IPR007070), Alkaline-phosphatase-like, core domain (InterPro:IPR017850), Sulfatase (InterPro:IPR000917); Has 1139 Blast hits to 1068 proteins in 222 species: Archae - 0; Bacteria - 85; Metazoa - 475; Fungi - 399; Plants - 79; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink). & (reliability: 460.0) & (original description: no original description) 0.8833028365338879 85 evm.model.tig00020912.63 no hits & (original description: no original description) 0.8830342417850681 86 evm.model.tig00000431.17 no hits & (original description: no original description) 0.8830323194762977 93 evm.model.tig00020510.44 no hits & (original description: no original description) 0.8825894947966197 88 evm.model.tig00000802.6 no hits & (original description: no original description) 0.8825757425254316 89 evm.model.tig00021314.5 no hits & (original description: no original description) 0.882310924382041 90 evm.model.tig00020675.35 no hits & (original description: no original description) 0.8821308536386641 91 evm.model.tig00000630.16 no hits & (original description: no original description) 0.8817526083714473 94 evm.model.tig00000157.80 no hits & (original description: no original description) 0.8816551330574518 95 evm.model.tig00000455.27 no hits & (original description: no original description) 0.8814953084001368 96 evm.model.tig00000219.4 (at1g27320 : 135.0) Encodes a histidine kinases, a cytokinin receptor that controls cytokinin-mediated leaf longevity through a specific phosphorylation of the response regulator, ARR2.; histidine kinase 3 (HK3); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 2 (TAIR:AT5G35750.1); Has 124308 Blast hits to 110912 proteins in 3043 species: Archae - 772; Bacteria - 110408; Metazoa - 31; Fungi - 2185; Plants - 2022; Viruses - 28; Other Eukaryotes - 8862 (source: NCBI BLink). & (o81122|etr1_maldo : 112.0) Ethylene receptor (EC 2.7.13.3) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 270.0) & (original description: no original description) 0.8814587604968318 97 evm.model.tig00000344.15 (at3g57030 : 98.2) Calcium-dependent phosphotriesterase superfamily protein; FUNCTIONS IN: strictosidine synthase activity; INVOLVED IN: alkaloid biosynthetic process, biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Strictosidine synthase, conserved region (InterPro:IPR018119), Strictosidine synthase (InterPro:IPR004141), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT5G22020.1); Has 1145 Blast hits to 1130 proteins in 241 species: Archae - 1; Bacteria - 292; Metazoa - 224; Fungi - 14; Plants - 486; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink). & (reliability: 196.4) & (original description: no original description) 0.8813114423483803 98 evm.model.tig00001496.5 no hits & (original description: no original description) 0.8812555242024463 99 evm.model.tig00000553.23 no hits & (original description: no original description) 0.8806338740516464 100