Sequence Description Alias PCC hrr evm.model.tig00000194.63 (original description: no original description) 0.9757720034785783 4 evm.model.tig00000955.33 (original description: no original description) 0.9717820664989556 3 evm.model.tig00001206.28 (original description: no original description) 0.9703033808216528 3 evm.model.tig00000404.40 (original description: no original description) 0.9668959825436095 4 evm.model.tig00000555.16 (original description: no original description) 0.9629780639368789 7 evm.model.tig00021017.27 (original description: no original description) 0.9509113104126798 12 evm.model.tig00020684.47 (q39610|dyha_chlre : 1367.0) Dynein alpha chain, flagellar outer arm (DHC alpha) - Chlamydomonas reinhardtii & (at1g18610 : 85.9) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch repeat type 2 (InterPro:IPR011498), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G74150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 171.8) & (original description: no original description) 0.9507490070435012 7 evm.model.tig00000076.78 (original description: no original description) 0.9487308378503196 8 evm.model.tig00000480.33 no hits & (original description: no original description) 0.9444047757542777 9 evm.model.tig00000849.39 no hits & (original description: no original description) 0.9406346229488031 10 evm.model.tig00000056.27 (original description: no original description) 0.9359711135320925 11 evm.model.tig00000169.16 (original description: no original description) 0.9334477640050972 18 evm.model.tig00020544.3 no hits & (original description: no original description) 0.9325073460419134 13 evm.model.tig00000217.12 no hits & (original description: no original description) 0.9294780953172361 14 evm.model.tig00001206.27 (original description: no original description) 0.9294354685620424 15 evm.model.tig00000849.40 no hits & (original description: no original description) 0.9284938328269868 16 evm.model.tig00000042.33 no hits & (original description: no original description) 0.9236189083029712 17 evm.model.tig00000169.15 (original description: no original description) 0.9206337542108399 18 evm.model.tig00000194.62 (original description: no original description) 0.9204205468644984 19 evm.model.tig00000581.7 no hits & (original description: no original description) 0.9184449811894603 20 evm.model.tig00001017.4 no hits & (original description: no original description) 0.9182872608901701 39 evm.model.tig00001017.3 no hits & (original description: no original description) 0.9181152344293693 22 evm.model.tig00022075.31 (original description: no original description) 0.9180482813435026 23 evm.model.tig00001107.7 no hits & (original description: no original description) 0.917189406279825 24 evm.model.tig00000042.101 (original description: no original description) 0.9139205223700178 25 evm.model.tig00001428.4 (at1g59453 : 80.9) B-block binding subunit of TFIIIC; CONTAINS InterPro DOMAIN/s: B-block binding subunit of TFIIIC (InterPro:IPR007309); BEST Arabidopsis thaliana protein match is: B-block binding subunit of TFIIIC (TAIR:AT1G17450.2); Has 138 Blast hits to 121 proteins in 36 species: Archae - 0; Bacteria - 0; Metazoa - 34; Fungi - 3; Plants - 91; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 161.8) & (original description: no original description) 0.9121437419088607 26 evm.model.tig00022075.30 (original description: no original description) 0.9075868144840045 27 evm.model.tig00000042.99 (original description: no original description) 0.9074554811398029 30 evm.model.tig00021017.28 (original description: no original description) 0.9064993276236025 29 evm.model.tig00000142.7 (original description: no original description) 0.905847763204343 30 evm.model.tig00020723.67 (original description: no original description) 0.9035155276712056 57 evm.model.tig00000093.84 no hits & (original description: no original description) 0.9033589747233829 32 evm.model.tig00000142.6 no hits & (original description: no original description) 0.9011413745597904 33 evm.model.tig00021537.38 no hits & (original description: no original description) 0.9003300105427425 34 evm.model.tig00021462.18 no hits & (original description: no original description) 0.8971140379352872 35 evm.model.tig00000145.14 no hits & (original description: no original description) 0.8960065816274554 36 evm.model.tig00000042.117 no hits & (original description: no original description) 0.8943186333421312 37 evm.model.tig00021013.29 no hits & (original description: no original description) 0.892157093121837 38 evm.model.tig00000851.10 (at1g59820 : 699.0) Encodes a phospholipid translocase. Involved in secretory vesicle formation from trans-Golgi in peripheral columella cells at the root tip. Mutants have short primary roots and grow slower.; aminophospholipid ATPase 3 (ALA3); FUNCTIONS IN: phospholipid transporter activity, ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: Golgi vesicle budding, shoot development, root development; LOCATED IN: Golgi apparatus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, phospholipid-translocating, flippase (InterPro:IPR006539), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT1G17500.1); Has 12776 Blast hits to 11290 proteins in 1545 species: Archae - 148; Bacteria - 4231; Metazoa - 2905; Fungi - 2108; Plants - 937; Viruses - 1; Other Eukaryotes - 2446 (source: NCBI BLink). & (q8run1|aca3_orysa : 88.6) Calcium-transporting ATPase 3, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 3) - Oryza sativa (Rice) & (reliability: 1286.0) & (original description: no original description) 0.8897159337646827 39 evm.model.tig00021350.41 (original description: no original description) 0.8893667724435724 41 evm.model.tig00000169.13 (original description: no original description) 0.8888251500017722 41 evm.model.tig00020909.44 no hits & (original description: no original description) 0.8871791879149422 60 evm.model.tig00000402.33 no hits & (original description: no original description) 0.8859392722188545 43 evm.model.tig00000718.24 no hits & (original description: no original description) 0.8836191534192284 44 evm.model.tig00000158.77 no hits & (original description: no original description) 0.8800752817746067 46 evm.model.tig00000459.51 (at5g24740 : 80.9) EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: calcium-dependent lipid-binding family protein (TAIR:AT1G48090.1). & (reliability: 161.8) & (original description: no original description) 0.8788709675444377 47 evm.model.tig00020710.81 no hits & (original description: no original description) 0.8769309773293619 48 evm.model.tig00020903.20 (at1g32750 : 166.0) This gene is predicted to encode a histone acetyltransferase. Five lines with RNAi constructs directed against HAF1 grow normally and can produce root calli, but have defects in agrobacterium-mediated transformation.; HAF01; FUNCTIONS IN: histone acetyltransferase activity, DNA binding; INVOLVED IN: DNA mediated transformation; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TAFII-230 TBP-binding (InterPro:IPR009067), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), Bromodomain, conserved site (InterPro:IPR018359), Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: histone acetyltransferase of the TAFII250 family 2 (TAIR:AT3G19040.1); Has 22854 Blast hits to 14376 proteins in 1001 species: Archae - 24; Bacteria - 596; Metazoa - 11292; Fungi - 2677; Plants - 2799; Viruses - 159; Other Eukaryotes - 5307 (source: NCBI BLink). & (reliability: 332.0) & (original description: no original description) 0.8765780174306887 51 evm.model.tig00000042.100 (original description: no original description) 0.87512689493905 56 evm.model.tig00020943.88 (q9mbf8|dyh1b_chlre : 669.0) Dynein-1-beta heavy chain, flagellar inner arm I1 complex (1-beta DHC) (Dynein-1, subspecies f) - Chlamydomonas reinhardtii & (at2g40570 : 194.0) initiator tRNA phosphoribosyl transferase family protein; FUNCTIONS IN: transferase activity, transferring pentosyl groups; INVOLVED IN: regulation of translation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Initiator tRNA phosphoribosyl transferase (InterPro:IPR007306), tRNA A64-2'-O-ribosylphosphate transferase, RIT1 (InterPro:IPR016519); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 388.0) & (original description: no original description) 0.8709953015531654 67 evm.model.tig00000581.10 no hits & (original description: no original description) 0.8707906635902861 53 evm.model.tig00000865.28 (at1g20960 : 1091.0) embryo defective 1507 (emb1507); FUNCTIONS IN: in 6 functions; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Sec63 domain (InterPro:IPR004179), Sec63 domain, subgroup (InterPro:IPR018127), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: U5 small nuclear ribonucleoprotein helicase (TAIR:AT2G42270.1). & (reliability: 2182.0) & (original description: no original description) 0.8662158367562091 64 evm.model.tig00021435.25 no hits & (original description: no original description) 0.865819678454258 86 evm.model.tig00020556.28 no hits & (original description: no original description) 0.8655658814884931 57 evm.model.tig00000411.70 no hits & (original description: no original description) 0.8652725794076622 59 evm.model.tig00020553.261 no hits & (original description: no original description) 0.8571565277489193 62 evm.model.tig00020531.34 no hits & (original description: no original description) 0.8570471968030526 63 evm.model.tig00000142.5 no hits & (original description: no original description) 0.8548190988545227 66 evm.model.tig00000076.76 no hits & (original description: no original description) 0.8540531579580859 67 evm.model.tig00020553.253 no hits & (original description: no original description) 0.8523096150656109 71 evm.model.tig00000865.27 (at1g20960 : 291.0) embryo defective 1507 (emb1507); FUNCTIONS IN: in 6 functions; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Sec63 domain (InterPro:IPR004179), Sec63 domain, subgroup (InterPro:IPR018127), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: U5 small nuclear ribonucleoprotein helicase (TAIR:AT2G42270.1). & (reliability: 582.0) & (original description: no original description) 0.8518845479572802 73 evm.model.tig00000269.74 no hits & (original description: no original description) 0.8511407400787003 74 evm.model.tig00001110.2 no hits & (original description: no original description) 0.8507715391570598 76 evm.model.tig00000042.116 no hits & (original description: no original description) 0.8506452216123044 77 evm.model.tig00000455.20 no hits & (original description: no original description) 0.849914939827075 78 evm.model.tig00000194.26 (at3g12810 : 251.0) Encodes a protein similar to ATP-dependent, chromatin-remodeling proteins of the ISWI and SWI2/SNF2 family. Genetic analyses suggest that this gene is involved in multiple flowering pathways. Mutations in PIE1 results in suppression of FLC-mediated delay of flowering and causes early flowering in noninductive photoperiods independently of FLC. PIE1 is required for expression of FLC in the shoot apex but not in the root.Along with ARP6 forms a complex to deposit modified histone H2A.Z at several loci within the genome. This modification alters the expression of the target genes (i.e. FLC, MAF4, MAF6).; PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 (PIE1); FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; INVOLVED IN: in 6 processes; LOCATED IN: SWI/SNF complex, cell wall, chromatin remodeling complex; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: HSA (InterPro:IPR006562), HAS subgroup (InterPro:IPR013999), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), SNF2-related (InterPro:IPR000330), MYB-like (InterPro:IPR017877), SANT, DNA-binding (InterPro:IPR001005), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: INO80 ortholog (TAIR:AT3G57300.1); Has 42311 Blast hits to 26312 proteins in 2357 species: Archae - 246; Bacteria - 10217; Metazoa - 11172; Fungi - 7336; Plants - 2916; Viruses - 500; Other Eukaryotes - 9924 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 143.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 502.0) & (original description: no original description) 0.8493547002951302 80 evm.model.tig00020614.80 no hits & (original description: no original description) 0.8475943656230089 81 evm.model.tig00001373.5 no hits & (original description: no original description) 0.8472141921391456 82 evm.model.tig00001477.1 no hits & (original description: no original description) 0.8446482547644163 84 evm.model.tig00000984.27 (at1g32490 : 711.0) Encodes a homolog of the yeast PRP2 protein, one of four related DEAH RNA helicases identified as essential cofactors for RNA splicing.; ENHANCED SILENCING PHENOTYPE 3 (ESP3); FUNCTIONS IN: helicase activity, ATP-dependent RNA helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; INVOLVED IN: RNA splicing, posttranscriptional gene silencing by RNA, embryo development ending in seed dormancy; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: helicase domain-containing protein (TAIR:AT2G35340.1). & (reliability: 1422.0) & (original description: no original description) 0.8445347279177778 85 evm.model.tig00020909.45 no hits & (original description: no original description) 0.8423843760108892 87 evm.model.tig00000632.13 no hits & (original description: no original description) 0.8422064990906981 89 evm.model.tig00020553.133 no hits & (original description: no original description) 0.8421694962222035 90 evm.model.tig00000983.14 no hits & (original description: no original description) 0.8413699840238281 92 evm.model.tig00020903.43 no hits & (original description: no original description) 0.8412146956577824 93 evm.model.tig00021127.170 no hits & (original description: no original description) 0.840706820816626 94 evm.model.tig00021534.6 no hits & (original description: no original description) 0.8397971258050708 95 evm.model.tig00021178.12 (at5g12350 : 87.0) Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain; FUNCTIONS IN: chromatin binding, zinc ion binding, Ran GTPase binding; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation, RCC1 (InterPro:IPR000408), Disease resistance/zinc finger/chromosome condensation-like region (InterPro:IPR013591), Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Zinc finger, FYVE-type (InterPro:IPR000306), Zinc finger, FYVE-related (InterPro:IPR017455), Pleckstrin homology-type (InterPro:IPR011993), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain (TAIR:AT5G19420.1); Has 23773 Blast hits to 8858 proteins in 456 species: Archae - 73; Bacteria - 2346; Metazoa - 9625; Fungi - 1299; Plants - 3027; Viruses - 3; Other Eukaryotes - 7400 (source: NCBI BLink). & (reliability: 171.0) & (original description: no original description) 0.8383185026658514 96 evm.model.tig00000411.59 no hits & (original description: no original description) 0.8381620176868851 97 evm.model.tig00020544.2 no hits & (original description: no original description) 0.8377835795589624 99