Sequence Description Alias PCC hrr evm.model.tig00021617.21 no hits & (original description: no original description) 0.9533471788004486 3 evm.model.tig00000254.76 no hits & (original description: no original description) 0.9241633719998371 12 evm.model.tig00000037.32 (at3g08720 : 132.0) Encodes a ribosomal-protein S6 kinase. Gene expression is induced by cold and salt (NaCl). Activation of AtS6k is regulated by 1-naphthylacetic acid and kinetin, at least in part, via a lipid kinase-dependent pathway. Phosphorylates specifically mammalian and plant S6 at 25 degrees C but not at 37 degrees C. Involved in translational up-regulation of ribosomal proteins.; Arabidopsis thaliana protein kinase 19 (ATPK19); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), AGC-kinase, C-terminal (InterPro:IPR000961), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, C-terminal (InterPro:IPR017892), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: protein-serine kinase 1 (TAIR:AT3G08730.1); Has 133901 Blast hits to 131707 proteins in 4554 species: Archae - 204; Bacteria - 15943; Metazoa - 48718; Fungi - 13429; Plants - 32816; Viruses - 561; Other Eukaryotes - 22230 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 94.4) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 264.0) & (original description: no original description) 0.9194198143548712 5 evm.model.tig00000217.27 no hits & (original description: no original description) 0.9017518084285896 58 evm.model.tig00000980.2 (at2g18540 : 94.0) RmlC-like cupins superfamily protein; FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT4G36700.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 188.0) & (original description: no original description) 0.9013558938969016 63 evm.model.tig00001164.22 (q39584|dyl3_chlre : 163.0) Dynein 18 kDa light chain, flagellar outer arm - Chlamydomonas reinhardtii & (at2g27030 : 95.5) encodes a calmodulin that has higher affinity to kinesin-like calmodulin binding motor protein than CAM4 or CAM6.; calmodulin 5 (CAM5); FUNCTIONS IN: calcium ion binding; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin 3 (TAIR:AT3G56800.1); Has 36011 Blast hits to 23475 proteins in 1766 species: Archae - 4; Bacteria - 234; Metazoa - 15635; Fungi - 7487; Plants - 7311; Viruses - 0; Other Eukaryotes - 5340 (source: NCBI BLink). & (reliability: 191.0) & (original description: no original description) 0.8971483596733086 31 evm.model.tig00000093.9 no hits & (original description: no original description) 0.896517248739618 51 evm.model.tig00001003.37 no hits & (original description: no original description) 0.8939007560441412 8 evm.model.tig00000057.73 no hits & (original description: no original description) 0.8935334935715697 15 evm.model.tig00021537.45 no hits & (original description: no original description) 0.8927811550297322 42 evm.model.tig00020996.11 no hits & (original description: no original description) 0.889370513059111 87 evm.model.tig00000042.105 no hits & (original description: no original description) 0.8877292909081423 85 evm.model.tig00001229.13 no hits & (original description: no original description) 0.8868921577087874 42 evm.model.tig00021612.29 no hits & (original description: no original description) 0.8866457730919094 52 evm.model.tig00020554.142 (at1g18800 : 162.0) Double nrp1-1 nrp2-1 mutants show arrest of cell cycle progression at G2/M and disordered cellular organization occurred in root tips. Localize in the nucleus and can form homomeric and heteromeric protein complexes with NRP1. Bind histones Histone2A and Histone2B and associate with chromatin in vivo.; NAP1-related protein 2 (NRP2); FUNCTIONS IN: chromatin binding, histone binding, DNA binding; INVOLVED IN: cell proliferation, cell differentiation, nucleosome assembly, lateral root formation; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleosome assembly protein (NAP) (InterPro:IPR002164); BEST Arabidopsis thaliana protein match is: NAP1-related protein 1 (TAIR:AT1G74560.2); Has 4380 Blast hits to 3595 proteins in 373 species: Archae - 7; Bacteria - 141; Metazoa - 1827; Fungi - 714; Plants - 336; Viruses - 93; Other Eukaryotes - 1262 (source: NCBI BLink). & (reliability: 324.0) & (original description: no original description) 0.8860025369057445 51 evm.model.tig00000203.31 no hits & (original description: no original description) 0.8850116766897237 59 evm.model.tig00000980.7 no hits & (original description: no original description) 0.8817435005950716 18 evm.model.tig00000037.36 no hits & (original description: no original description) 0.8804253059072145 52 evm.model.tig00000350.34 no hits & (original description: no original description) 0.8760013398798152 93 evm.model.tig00000319.27 no hits & (original description: no original description) 0.8722903153549415 91 evm.model.tig00000704.62 (at5g16750 : 108.0) Encodes a nucleolar localized WD-40 repeat protein that is preferentially expressed in dividing cells and is required for regulated division planes and embryo development.; TORMOZEMBRYO DEFECTIVE (TOZ); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), Small-subunit processome, Utp13 (InterPro:IPR013934), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 153281 Blast hits to 38108 proteins in 953 species: Archae - 96; Bacteria - 13855; Metazoa - 64321; Fungi - 32637; Plants - 21715; Viruses - 0; Other Eukaryotes - 20657 (source: NCBI BLink). & (reliability: 216.0) & (original description: no original description) 0.8569643844706714 31 evm.model.tig00000404.25 no hits & (original description: no original description) 0.8557538264651562 85 evm.model.tig00020537.24 no hits & (original description: no original description) 0.8514892067728023 94 evm.model.tig00020538.71 (at1g17440 : 110.0) Encodes one of two Arabidopsis proteins with similarity to the TBP-associated factor TAF12. The gene product is an EIN3-interacting TFIID transcription factor required for proper ethylene response, including ERF1 induction. Loss of function mutants show enhanced response to ethylene. Located in nucleus and expressed throughout the plant. Required for ERF1 expression.; ENHANCED ETHYLENE RESPONSE 4 (EER4); FUNCTIONS IN: DNA binding, transcription initiation factor activity; INVOLVED IN: regulation of ethylene mediated signaling pathway, jasmonic acid mediated signaling pathway, transcription initiation; LOCATED IN: nucleus, transcription factor TFIID complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription initiation factor TFIID (InterPro:IPR003228), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: TBP-associated factor 12 (TAIR:AT3G10070.1); Has 83508 Blast hits to 36935 proteins in 1541 species: Archae - 40; Bacteria - 5554; Metazoa - 31214; Fungi - 9645; Plants - 6795; Viruses - 322; Other Eukaryotes - 29938 (source: NCBI BLink). & (reliability: 220.0) & (original description: no original description) 0.8492988799109841 97 evm.model.tig00000852.45 no hits & (original description: no original description) 0.846378557070569 48 evm.model.tig00001073.13 no hits & (original description: no original description) 0.8450809527535511 71 evm.model.tig00021108.35 (at2g20560 : 171.0) DNAJ heat shock family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT4G28480.1); Has 27936 Blast hits to 27733 proteins in 3449 species: Archae - 187; Bacteria - 10270; Metazoa - 4781; Fungi - 2609; Plants - 2869; Viruses - 17; Other Eukaryotes - 7203 (source: NCBI BLink). & (q04960|dnjh_cucsa : 94.7) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 342.0) & (original description: no original description) 0.8428299723397245 52 evm.model.tig00021073.35 no hits & (original description: no original description) 0.8416978861526859 88 evm.model.tig00001487.15 no hits & (original description: no original description) 0.8402341738882 93 evm.model.tig00022075.29 (at4g31720 : 120.0) Arabidopsis thaliana putative TBP-associated 15 kDa subunit protein (TAFII15); TBP-associated factor II 15 (TAFII15); FUNCTIONS IN: RNA polymerase II transcription factor activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: transcription initiation; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription initiation factor TFIID, 23-30kDa subunit (InterPro:IPR003923); Has 372 Blast hits to 372 proteins in 163 species: Archae - 0; Bacteria - 0; Metazoa - 153; Fungi - 132; Plants - 56; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (reliability: 240.0) & (original description: no original description) 0.8376499403084358 91 evm.model.tig00000880.17 no hits & (original description: no original description) 0.834379945847973 65 evm.model.tig00000802.14 no hits & (original description: no original description) 0.8310990504724922 100 evm.model.tig00000718.39 (at3g59600 : 150.0) One of two highly similar proteins that can serve as non-catalytic subunits of Nuclear RNA polymerases II, IV and V; homologous to budding yeast RPB8. Probably redundant with At1g54250.; NRPB8B; FUNCTIONS IN: DNA-directed RNA polymerase activity; INVOLVED IN: transcription; LOCATED IN: DNA-directed RNA polymerase II, core complex; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), RNA polymerase, Rpb8 (InterPro:IPR005570); BEST Arabidopsis thaliana protein match is: RNA polymerase Rpb8 (TAIR:AT1G54250.1); Has 513 Blast hits to 511 proteins in 218 species: Archae - 0; Bacteria - 0; Metazoa - 139; Fungi - 205; Plants - 84; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (reliability: 300.0) & (original description: no original description) 0.8307917478261735 71 evm.model.tig00001027.15 no hits & (original description: no original description) 0.8302393197682828 88 evm.model.tig00000037.24 no hits & (original description: no original description) 0.8295694331440546 74 evm.model.tig00000073.67 no hits & (original description: no original description) 0.8225769986960932 87 evm.model.tig00000769.19 no hits & (original description: no original description) 0.8213587009403702 92 evm.model.tig00000404.29 no hits & (original description: no original description) 0.8210091219545389 93 evm.model.tig00020554.50 (at3g56510 : 95.5) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: TATA-binding protein binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 191.0) & (original description: no original description) 0.8209963209475423 94 evm.model.tig00000789.1 (at1g01940 : 189.0) Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892); BEST Arabidopsis thaliana protein match is: plant U-box 49 (TAIR:AT5G67530.1); Has 17692 Blast hits to 17552 proteins in 2716 species: Archae - 108; Bacteria - 7521; Metazoa - 2867; Fungi - 1402; Plants - 1253; Viruses - 0; Other Eukaryotes - 4541 (source: NCBI BLink). & (q39613|cyph_catro : 82.8) Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 378.0) & (original description: no original description) 0.820244172923096 98 evm.model.tig00020510.74 (at5g15750 : 216.0) Alpha-L RNA-binding motif/Ribosomal protein S4 family protein; FUNCTIONS IN: RNA binding, rRNA binding; LOCATED IN: cytosolic small ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S4 (InterPro:IPR001912), RNA-binding S4 (InterPro:IPR002942); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 432.0) & (original description: no original description) 0.8186766126568128 100