Sequence Description Alias PCC hrr evm.model.tig00021617.17 no hits & (original description: no original description) 0.9252288279943836 7 evm.model.tig00000241.164 no hits & (original description: no original description) 0.9155229553689284 19 evm.model.tig00001038.27 (at3g13290 : 87.8) varicose-related (VCR); FUNCTIONS IN: nucleotide binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G13300.1); Has 1082 Blast hits to 861 proteins in 259 species: Archae - 6; Bacteria - 246; Metazoa - 313; Fungi - 205; Plants - 136; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink). & (reliability: 175.6) & (original description: no original description) 0.9145113950583451 21 evm.model.tig00020603.27 no hits & (original description: no original description) 0.909540969489037 14 evm.model.tig00001484.1 no hits & (original description: no original description) 0.9040435649565337 11 evm.model.tig00020943.19 (at2g40550 : 152.0) Encodes a nuclear localized target of E2Fa-DPa, transcription factors controlling cell cycle progression. Required for sister chromatid cohesion and DNA repair.; E2F target gene 1 (ETG1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: sister chromatid cohesion, postreplication repair, DNA replication; LOCATED IN: nuclear replisome, nucleus, chloroplast envelope, MCM complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2044, membrane (InterPro:IPR019140); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 304.0) & (original description: no original description) 0.9004450585655566 36 evm.model.tig00001056.23 no hits & (original description: no original description) 0.9002666072358568 23 evm.model.tig00001224.12 no hits & (original description: no original description) 0.8997649319572638 19 evm.model.tig00000219.75 no hits & (original description: no original description) 0.898030284172439 13 evm.model.tig00000459.100 no hits & (original description: no original description) 0.8967851883542631 40 evm.model.tig00000473.3 no hits & (original description: no original description) 0.8966870429594931 50 evm.model.tig00000158.66 no hits & (original description: no original description) 0.8964689686988905 80 evm.model.tig00021127.19 no hits & (original description: no original description) 0.8931347745387528 27 evm.model.tig00000615.40 no hits & (original description: no original description) 0.8906925655844177 31 evm.model.tig00020629.84 (at1g56500 : 87.8) haloacid dehalogenase-like hydrolase family protein; FUNCTIONS IN: hydrolase activity, oxidoreductase activity, catalytic activity; INVOLVED IN: metabolic process, cell redox homeostasis; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehydrogenase/epoxide hydrolase (InterPro:IPR005833), Low-density lipoprotein receptor, class B (YWTD) repeat (InterPro:IPR000033), Thioredoxin fold (InterPro:IPR012335), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), Thioredoxin-like (InterPro:IPR017936), NHL repeat (InterPro:IPR001258), Thioredoxin-like fold (InterPro:IPR012336), Redoxin (InterPro:IPR013740), HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:AT3G07060.1); Has 23445 Blast hits to 20574 proteins in 2565 species: Archae - 340; Bacteria - 17044; Metazoa - 1036; Fungi - 332; Plants - 721; Viruses - 3; Other Eukaryotes - 3969 (source: NCBI BLink). & (reliability: 175.6) & (original description: no original description) 0.8891330104835046 59 evm.model.tig00020930.26 no hits & (original description: no original description) 0.8877663447754407 16 evm.model.tig00000940.6 no hits & (original description: no original description) 0.8871345545381198 60 evm.model.tig00000254.14 (at4g32420 : 90.1) Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130); BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT3G63400.3). & (reliability: 180.2) & (original description: no original description) 0.885182901981605 20 evm.model.tig00000882.17 no hits & (original description: no original description) 0.883432809981668 20 evm.model.tig00020734.41 no hits & (original description: no original description) 0.8812506860834345 97 evm.model.tig00021122.8 no hits & (original description: no original description) 0.8810112639486336 22 evm.model.tig00020554.56 no hits & (original description: no original description) 0.880725228567589 69 evm.model.tig00020934.32 no hits & (original description: no original description) 0.8804029241387226 61 evm.model.tig00021276.11 (at1g73990 : 144.0) Encodes a putative protease SppA (SppA).; signal peptide peptidase (SPPA); FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: proteolysis, response to light intensity; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S49, protease IV (InterPro:IPR004634), Peptidase S49 (InterPro:IPR002142), Peptidase S49, SppA (InterPro:IPR004635); Has 9340 Blast hits to 7649 proteins in 1706 species: Archae - 204; Bacteria - 6183; Metazoa - 9; Fungi - 4; Plants - 52; Viruses - 43; Other Eukaryotes - 2845 (source: NCBI BLink). & (reliability: 288.0) & (original description: no original description) 0.8799835193699731 44 evm.model.tig00021680.21 no hits & (original description: no original description) 0.8798738343276192 82 evm.model.tig00020830.122 no hits & (original description: no original description) 0.8795011785862871 75 evm.model.tig00000663.42 no hits & (original description: no original description) 0.8790562884486185 50 evm.model.tig00000241.67 no hits & (original description: no original description) 0.8789708027794243 39 evm.model.tig00021612.42 no hits & (original description: no original description) 0.8788754846401441 38 evm.model.tig00000241.173 (at2g17570 : 180.0) Undecaprenyl pyrophosphate synthetase family protein; FUNCTIONS IN: transferase activity, transferring alkyl or aryl (other than methyl) groups; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Di-trans-poly-cis-decaprenylcistransferase-like, conserved site (InterPro:IPR018520), Di-trans-poly-cis-decaprenylcistransferase-like (InterPro:IPR001441); BEST Arabidopsis thaliana protein match is: Undecaprenyl pyrophosphate synthetase family protein (TAIR:AT5G60510.1); Has 9017 Blast hits to 8995 proteins in 2779 species: Archae - 230; Bacteria - 5298; Metazoa - 197; Fungi - 223; Plants - 211; Viruses - 0; Other Eukaryotes - 2858 (source: NCBI BLink). & (reliability: 338.0) & (original description: no original description) 0.8777971007954676 63 evm.model.tig00001229.4 (at5g09860 : 97.1) Encodes a component of the putative Arabidopsis THO/TREX complex: THO1 or HPR1 (At5g09860), THO2 (At1g24706), THO3 or TEX1 (At5g56130), THO5 (At5g42920, At1g45233), THO6 (At2g19430), and THO7 (At5g16790, At3g02950). THO/TREX complexes in animals have been implicated in the transport of mRNA precursors. Mutants of THO3/TEX1, THO1, THO6 accumulate reduced amount of small interfering (si)RNA, suggesting a role of the putative Arabidopsis THO/TREX in siRNA biosynthesis.; THO1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: production of ta-siRNAs involved in RNA interference, gene silencing by RNA; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: THO complex, subunit THOC1 (InterPro:IPR021861). & (reliability: 194.2) & (original description: no original description) 0.8775588499566195 67 evm.model.tig00001590.10 no hits & (original description: no original description) 0.8771541722821359 82 evm.model.tig00000754.9 no hits & (original description: no original description) 0.8752879826205864 37 evm.model.tig00021037.43 no hits & (original description: no original description) 0.8750002424848333 39 evm.model.tig00000282.13 no hits & (original description: no original description) 0.8745229181282558 45 evm.model.tig00000863.40 (at2g20190 : 85.1) Encodes a microtubule-associated protein that is involved in both cell division and cell expansion. It likely promotes microtubule stability.; CLIP-associated protein (CLASP); FUNCTIONS IN: binding; INVOLVED IN: mitosis, protein stabilization, cell growth; LOCATED IN: spindle microtubule, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 170.2) & (original description: no original description) 0.8740322313121511 76 evm.model.tig00020912.61 no hits & (original description: no original description) 0.8740083666605762 43 evm.model.tig00021127.7 no hits & (original description: no original description) 0.8734245054220717 40 evm.model.tig00021319.22 no hits & (original description: no original description) 0.8721956433880845 48 evm.model.tig00020610.22 no hits & (original description: no original description) 0.8721794390496137 66 evm.model.tig00000663.31 (at3g60740 : 192.0) Encodes tubulin-folding cofactor D. Mutants arrest during embryogenesis with embryos that are small, mushroom-shaped ('pilz') and consist of only one or few large cells each containing one or more variably enlarged nuclei and often cell wall stubs. Gene product necessary for continuous microtubule organization.; TITAN 1 (TTN1); CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 384.0) & (original description: no original description) 0.8709555996399179 43 evm.model.tig00020930.5 no hits & (original description: no original description) 0.8698026222851998 44 evm.model.tig00000076.96 (at5g47690 : 111.0) binding; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, nucleus; EXPRESSED IN: cotyledon, guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G77600.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 222.0) & (original description: no original description) 0.8676525259776013 45 evm.model.tig00000053.21 no hits & (original description: no original description) 0.8675996579239991 46 evm.model.tig00000870.40 no hits & (original description: no original description) 0.867546867677682 47 evm.model.tig00021105.32 no hits & (original description: no original description) 0.8659960748982986 48 evm.model.tig00020848.21 (at1g79650 : 108.0) Encodes a member of the RADIATION SENSITIVE23 (RAD23) family: AT1G16190(RAD23A), AT1G79650(RAD23B), AT3G02540(RAD23C), AT5G38470(RAD23D). RAD23 proteins play an essential role in the cell cycle, morphology, and fertility of plants through their delivery of UPS (ubiquitin/26S proteasome system) substrates to the 26S proteasome.; RADIATION SENSITIVE23B (RAD23B); FUNCTIONS IN: damaged DNA binding, ubiquitin binding, proteasome binding; INVOLVED IN: proteasomal ubiquitin-dependent protein catabolic process, base-excision repair, nucleotide-excision repair; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), UV excision repair protein Rad23 (InterPro:IPR004806), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), XPC-binding domain (InterPro:IPR015360), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Rad23 UV excision repair protein family (TAIR:AT1G16190.1). & (reliability: 216.0) & (original description: no original description) 0.863180737676712 51 evm.model.tig00020614.111 (at1g03445 : 265.0) encodes a serine/threonine protein phosphatase with an N-terminal Kelch-repeat domain, which is nuclear localized and expressed preferentially in elongating cells. Genetic evidence suggest that this gene plays a redundant role (along with other members of the same gene family) in modulating growth in response to brassinosteroid.; BRI1 SUPPRESSOR 1 (BSU1); FUNCTIONS IN: protein binding, protein serine/threonine phosphatase activity; INVOLVED IN: brassinosteroid mediated signaling pathway, regulation of protein localization; LOCATED IN: nucleus; EXPRESSED IN: sperm cell, male gametophyte, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Serine/threonine protein phosphatase, BSU1 (InterPro:IPR012391), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Metallophosphoesterase (InterPro:IPR004843), Kelch repeat type 2 (InterPro:IPR011498), Kelch-type beta propeller (InterPro:IPR015915), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: BRI1 suppressor 1 (BSU1)-like 1 (TAIR:AT4G03080.1); Has 12351 Blast hits to 9811 proteins in 679 species: Archae - 82; Bacteria - 604; Metazoa - 4121; Fungi - 2161; Plants - 2580; Viruses - 7; Other Eukaryotes - 2796 (source: NCBI BLink). & (q2qm47|bsl2_orysa : 258.0) Serine/threonine-protein phosphatase BSL2 homolog (EC 3.1.3.16) (BSU1-like protein 2 homolog) - Oryza sativa (Rice) & (reliability: 530.0) & (original description: no original description) 0.8617384041257167 100 evm.model.tig00020878.22 no hits & (original description: no original description) 0.8577935098883559 59 evm.model.tig00000402.15 no hits & (original description: no original description) 0.8575759789874744 93 evm.model.tig00021036.8 no hits & (original description: no original description) 0.8567302814376898 58 evm.model.tig00000145.22 no hits & (original description: no original description) 0.8562482180933664 59 evm.model.tig00000769.27 no hits & (original description: no original description) 0.8558336734158426 60 evm.model.tig00000857.18 no hits & (original description: no original description) 0.8540409212428173 62 evm.model.tig00021073.57 no hits & (original description: no original description) 0.8535021608842273 94 evm.model.tig00020951.34 no hits & (original description: no original description) 0.8527296429833109 64 evm.model.tig00021293.6 (at5g22750 : 259.0) DNA repair gene. gamma-radiation hypersensitive (RAD5) involved in stable transformation and T-DNA transfer; RAD5; FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA mediated transformation; EXPRESSED IN: embryo, sperm cell, seed; EXPRESSED DURING: E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), HIP116, Rad5p N-terminal (InterPro:IPR014905), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Helicase protein with RING/U-box domain (TAIR:AT5G43530.1); Has 27107 Blast hits to 18179 proteins in 1771 species: Archae - 108; Bacteria - 7266; Metazoa - 8140; Fungi - 5089; Plants - 2446; Viruses - 173; Other Eukaryotes - 3885 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 80.9) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 518.0) & (original description: no original description) 0.8513790274139359 65 evm.model.tig00000093.130 no hits & (original description: no original description) 0.8505906729731457 90 evm.model.tig00000903.9 (at5g19180 : 343.0) Encodes a subunit of a RUB-activating enzyme analogous to the E1 ubiquitin-activating enzyme. ECR1 functions as a heterodimer with AXR1 to activate RUB, a ubiquitin-related protein.; E1 C-terminal related 1 (ECR1); CONTAINS InterPro DOMAIN/s: Ubiquitin-activating enzyme repeat (InterPro:IPR000127), Ubiquitin-activating enzyme, E1, active site (InterPro:IPR018074), Ubiquitin-activating enzyme (InterPro:IPR019572), UBA/THIF-type NAD/FAD binding fold (InterPro:IPR000594), Molybdenum cofactor biosynthesis, MoeB (InterPro:IPR009036), NAD(P)-binding domain (InterPro:IPR016040), E2 binding (InterPro:IPR014929); BEST Arabidopsis thaliana protein match is: SUMO-activating enzyme 2 (TAIR:AT2G21470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p31251|ube12_wheat : 103.0) Ubiquitin-activating enzyme E1 2 - Triticum aestivum (Wheat) & (reliability: 686.0) & (original description: no original description) 0.8502169653481554 69 evm.model.tig00000269.32 no hits & (original description: no original description) 0.8476622010019949 71 evm.model.tig00001604.6 no hits & (original description: no original description) 0.8473092546554021 72 evm.model.tig00000403.99 no hits & (original description: no original description) 0.8470635000637496 73 evm.model.tig00021073.3 no hits & (original description: no original description) 0.8464992202805959 75 evm.model.tig00000147.73 no hits & (original description: no original description) 0.8456841821439041 78 evm.model.tig00001017.6 no hits & (original description: no original description) 0.8455800292054511 79 evm.model.tig00021795.6 no hits & (original description: no original description) 0.8452976322492709 80 evm.model.tig00020960.62 no hits & (original description: no original description) 0.8452114652352992 82 evm.model.tig00000640.17 no hits & (original description: no original description) 0.8442666540633164 85 evm.model.tig00000147.72 (at1g27320 : 163.0) Encodes a histidine kinases, a cytokinin receptor that controls cytokinin-mediated leaf longevity through a specific phosphorylation of the response regulator, ARR2.; histidine kinase 3 (HK3); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 2 (TAIR:AT5G35750.1); Has 124308 Blast hits to 110912 proteins in 3043 species: Archae - 772; Bacteria - 110408; Metazoa - 31; Fungi - 2185; Plants - 2022; Viruses - 28; Other Eukaryotes - 8862 (source: NCBI BLink). & (o81122|etr1_maldo : 115.0) Ethylene receptor (EC 2.7.13.3) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 326.0) & (original description: no original description) 0.84252473222328 88 evm.model.tig00020537.66 (at5g40820 : 318.0) Encodes a Arabidopsis ortholog of the ATR protein kinase that is involved in a wide range of responses to DNA damage and plays a central role in cell-cycle regulation. Dominant loss of function alleles identified as suppressors of ALS also exhibit increased tolerance to aluminum. This may be due to the inhibition of terminal differentiation of the root apex upon exposure to Al.; Ataxia telangiectasia-mutated and RAD3-related (ATR); FUNCTIONS IN: protein serine/threonine kinase activity, inositol or phosphatidylinositol kinase activity, binding, phosphotransferase activity, alcohol group as acceptor; INVOLVED IN: in 9 processes; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403), UME (InterPro:IPR012993), Protein kinase-like domain (InterPro:IPR011009), PIK-related kinase, FAT (InterPro:IPR003151), Armadillo-type fold (InterPro:IPR016024), PIK-related kinase (InterPro:IPR014009), Phosphatidylinositol 3/4-kinase, conserved site (InterPro:IPR018936), PIK-related kinase, FATC (InterPro:IPR003152); BEST Arabidopsis thaliana protein match is: ataxia-telangiectasia mutated (TAIR:AT3G48190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q5z987|atr_orysa : 304.0) Serine/threonine-protein kinase ATR (EC 2.7.11.1) - Oryza sativa (Rice) & (reliability: 636.0) & (original description: no original description) 0.8421291257347419 95 evm.model.tig00021682.13 no hits & (original description: no original description) 0.8399468037302914 95 evm.model.tig00020538.7 no hits & (original description: no original description) 0.8394660286823307 97 evm.model.tig00021623.13 (at2g25170 : 464.0) Encodes a SWI/SWF nuclear-localized chromatin remodeling factor of the CHD3 group. Involved in post-germination repression of embryonic development. Acts with GA to establish repression of embryonic genes upon germination. Protein preferentially accumulates in differentiating tissues. Loss of function alleles are associated with expression of embryonic traits in adult plants and derepression of embryonic genes such as PHEROS1. Is an extragenic suppressor of slr2 (SSL2). Mutations in PKL (SSL2) restores lateral root formation in the slr2 mutant slr-1. It was proposed that PKL/SSL2-mediated chromatin remodeling negatively regulates auxin-mediated LR formation in Arabidopsis.; PICKLE (PKL); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1087 (InterPro:IPR009463), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Protein of unknown function DUF1086 (InterPro:IPR009462), Chromo domain (InterPro:IPR000953), SNF2-related (InterPro:IPR000330), DEAD-like helicase, N-terminal (InterPro:IPR014001), Chromo domain-like (InterPro:IPR016197), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor, putative (TAIR:AT4G31900.1); Has 20234 Blast hits to 17178 proteins in 1958 species: Archae - 161; Bacteria - 5176; Metazoa - 5098; Fungi - 4334; Plants - 1876; Viruses - 134; Other Eukaryotes - 3455 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 369.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 872.0) & (original description: no original description) 0.8391613122878399 98