Sequence Description Alias PCC hrr evm.model.tig00020610.49 (at3g06620 : 141.0) PAS domain-containing protein tyrosine kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: signal transduction, protein amino acid phosphorylation, regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610), Protein kinase, catalytic domain (InterPro:IPR000719), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: PAS domain-containing protein tyrosine kinase family protein (TAIR:AT5G49470.3); Has 125703 Blast hits to 124182 proteins in 4625 species: Archae - 237; Bacteria - 14697; Metazoa - 46775; Fungi - 11283; Plants - 33084; Viruses - 499; Other Eukaryotes - 19128 (source: NCBI BLink). & (reliability: 282.0) & (original description: no original description) 0.9385757221096899 19 evm.model.tig00000189.40 no hits & (original description: no original description) 0.9367452913244301 8 evm.model.tig00020851.11 (at1g50380 : 374.0) Prolyl oligopeptidase family protein; FUNCTIONS IN: serine-type peptidase activity, serine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S9, prolyl oligopeptidase, catalytic domain (InterPro:IPR001375), Peptidase S9A, oligopeptidase, N-terminal beta-propeller (InterPro:IPR004106), Peptidase S9A, prolyl oligopeptidase (InterPro:IPR002470); BEST Arabidopsis thaliana protein match is: Prolyl oligopeptidase family protein (TAIR:AT1G69020.1); Has 7641 Blast hits to 7556 proteins in 1214 species: Archae - 80; Bacteria - 3203; Metazoa - 306; Fungi - 27; Plants - 212; Viruses - 0; Other Eukaryotes - 3813 (source: NCBI BLink). & (reliability: 748.0) & (original description: no original description) 0.9351936533528977 19 evm.model.tig00000498.88 (at5g35980 : 218.0) yeast YAK1-related gene 1 (YAK1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G17750.1); Has 91682 Blast hits to 90157 proteins in 2771 species: Archae - 99; Bacteria - 7981; Metazoa - 36897; Fungi - 11192; Plants - 18283; Viruses - 359; Other Eukaryotes - 16871 (source: NCBI BLink). & (o04160|ksgt_brana : 141.0) Shaggy-related protein kinase theta (EC 2.7.11.1) (ASK-theta) - Brassica napus (Rape) & (reliability: 436.0) & (original description: no original description) 0.9295993650711366 31 evm.model.tig00020801.16 no hits & (original description: no original description) 0.9270545656149494 21 evm.model.tig00020704.34 no hits & (original description: no original description) 0.9267727856176163 37 evm.model.tig00000615.6 no hits & (original description: no original description) 0.9221302737544185 7 evm.model.tig00021493.42 no hits & (original description: no original description) 0.9219516548144489 80 evm.model.tig00000042.36 no hits & (original description: no original description) 0.9188766793824974 77 evm.model.tig00000241.154 (at1g37150 : 117.0) holocarboxylase synthetase 2 (HCS2); FUNCTIONS IN: biotin-[acetyl-CoA-carboxylase] ligase activity, catalytic activity; INVOLVED IN: protein modification process; EXPRESSED IN: pedicel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Biotin protein ligase, C-terminal (InterPro:IPR003142), Biotin/lipoate A/B protein ligase (InterPro:IPR004143), Biotin--acetyl-CoA-carboxylase ligase (InterPro:IPR004408); BEST Arabidopsis thaliana protein match is: holocarboxylase synthase 1 (TAIR:AT2G25710.2); Has 6001 Blast hits to 6001 proteins in 2273 species: Archae - 223; Bacteria - 3976; Metazoa - 118; Fungi - 132; Plants - 62; Viruses - 0; Other Eukaryotes - 1490 (source: NCBI BLink). & (reliability: 234.0) & (original description: no original description) 0.9178566512776519 15 evm.model.tig00000144.59 (at2g29900 : 230.0) Presenilin-2 (PS2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular signaling pathway; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase A22, presenilin signal peptide (InterPro:IPR006639), Peptidase A22A, presenilin (InterPro:IPR001108); BEST Arabidopsis thaliana protein match is: Presenilin-1 (TAIR:AT1G08700.1); Has 475 Blast hits to 452 proteins in 108 species: Archae - 2; Bacteria - 0; Metazoa - 334; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (reliability: 460.0) & (original description: no original description) 0.9177184331085447 11 evm.model.tig00000411.67 (at1g32190 : 84.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; LOCATED IN: plasma membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase/carboxylesterase (InterPro:IPR003140); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G24320.1); Has 8246 Blast hits to 4770 proteins in 635 species: Archae - 4; Bacteria - 774; Metazoa - 5275; Fungi - 116; Plants - 474; Viruses - 14; Other Eukaryotes - 1589 (source: NCBI BLink). & (reliability: 168.0) & (original description: no original description) 0.9160111106466653 12 evm.model.tig00020780.30 no hits & (original description: no original description) 0.9158777011138344 35 evm.model.tig00021428.15 no hits & (original description: no original description) 0.9155040761544603 34 evm.model.tig00020563.139 no hits & (original description: no original description) 0.9143295494631353 36 evm.model.tig00001253.6 no hits & (original description: no original description) 0.9132125922275921 19 evm.model.tig00021126.1 no hits & (original description: no original description) 0.9131811578482046 57 evm.model.tig00021434.67 no hits & (original description: no original description) 0.9108747320893881 18 evm.model.tig00001408.8 no hits & (original description: no original description) 0.9099680991627788 50 evm.model.tig00021522.7 no hits & (original description: no original description) 0.9072104824406447 70 evm.model.tig00000241.175 (at1g75660 : 257.0) Encodes a protein with similarity to yeast 5'-3'exonucleases and can functionally complement the yeast mutations. In Arabidopsis XRN3 acts as a suppressor of posttranscriptional gene silencing. Mutants accumulate excised miRNA products suggesting that XRN3 is involved in degradation of these products.; 5'-3' exoribonuclease 3 (XRN3); CONTAINS InterPro DOMAIN/s: 5'-3' exoribonuclease 2 (InterPro:IPR017151), Zinc finger, CCHC-type (InterPro:IPR001878), Putative 5-3 exonuclease (InterPro:IPR004859); BEST Arabidopsis thaliana protein match is: exoribonuclease 2 (TAIR:AT5G42540.1); Has 4264 Blast hits to 3505 proteins in 442 species: Archae - 2; Bacteria - 295; Metazoa - 1361; Fungi - 725; Plants - 751; Viruses - 31; Other Eukaryotes - 1099 (source: NCBI BLink). & (reliability: 514.0) & (original description: no original description) 0.9052200425665101 78 evm.model.tig00001302.11 no hits & (original description: no original description) 0.9039744901127047 22 evm.model.tig00000037.30 (at5g11860 : 173.0) Encodes a SCP1-like small phosphatase (SSP). Three SSPs form a unique group with long N-terminal extensions: AT5G46410 (SSP4), AT5G11860 (SSP5), AT4G18140 (SSP4b). SSP4 and SSP4b were localized exclusively in the nuclei, whereas SSP5 accumulated in both nuclei and cytoplasm. All three SSPs encodes active CTD phosphatases like animal SCP1 family proteins, with distinct substrate specificities: SSP4 and SSP4b could dephosphorylate both Ser2-PO(4) and Ser5-PO(4) of CTD, whereas SSP5 dephosphorylated only Ser5-PO(4).; SCP1-like small phosphatase 5; CONTAINS InterPro DOMAIN/s: Dullard-like phosphatase domain (InterPro:IPR011948), NLI interacting factor (InterPro:IPR004274); BEST Arabidopsis thaliana protein match is: SCP1-like small phosphatase 4 (TAIR:AT5G46410.1); Has 2780 Blast hits to 2771 proteins in 250 species: Archae - 0; Bacteria - 14; Metazoa - 839; Fungi - 559; Plants - 525; Viruses - 1; Other Eukaryotes - 842 (source: NCBI BLink). & (reliability: 346.0) & (original description: no original description) 0.9039174984479461 77 evm.model.tig00000144.175 (at1g35190 : 153.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction, alkaloid biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G46490.1); Has 8500 Blast hits to 8467 proteins in 983 species: Archae - 0; Bacteria - 1153; Metazoa - 122; Fungi - 1092; Plants - 4450; Viruses - 0; Other Eukaryotes - 1683 (source: NCBI BLink). & (q8rvf5|gaox2_orysa : 100.0) Gibberellin 20 oxidase 2 (EC 1.14.11.-) (Gibberellin C-20 oxidase 2) (GA 20-oxidase 2) (Os20ox2) (Semidwarf-1 protein) - Oryza sativa (Rice) & (reliability: 306.0) & (original description: no original description) 0.9029728806205735 24 evm.model.tig00020693.44 no hits & (original description: no original description) 0.9020312224668409 36 evm.model.tig00020610.74 no hits & (original description: no original description) 0.9020216821262967 60 evm.model.tig00000204.49 no hits & (original description: no original description) 0.9010090682054884 74 evm.model.tig00021525.22 (at5g26040 : 254.0) Class III RPD3 type protein. Encodes HDA2, a member of the histone deacetylase family proteins.; histone deacetylase 2 (HDA2); CONTAINS InterPro DOMAIN/s: Histone deacetylase superfamily (InterPro:IPR000286); BEST Arabidopsis thaliana protein match is: histone deacetylase 6 (TAIR:AT5G63110.1); Has 8459 Blast hits to 8281 proteins in 1419 species: Archae - 213; Bacteria - 3093; Metazoa - 1435; Fungi - 484; Plants - 429; Viruses - 0; Other Eukaryotes - 2805 (source: NCBI BLink). & (reliability: 508.0) & (original description: no original description) 0.900735255792851 74 evm.model.tig00020961.142 no hits & (original description: no original description) 0.8994989197125174 30 evm.model.tig00020563.102 (at3g06810 : 373.0) Encodes a protein with similarity to acyl-CoA dehydrogenases. Mutations in IBR3 render plants resistant to indole-3-butryic acid, a putative storage form of the biologically active auxin IAA (indole-3-acetic acid). IBR3 is hypothesized to carry out the second step in a β-oxidation-like process of IBA metabolism in Arabidopsis. Though its subcellular location has not been determined, IBR3 has a peroxisomal targeting sequence and two other putative IBA metabolic enzymes (IBR1 and IBR10) can be found in this organelle. No specific enzymatic activity has been documented for IBR3, but double mutant analyses with CHY1 argue against a role for IBR3 in general fatty acid β-oxidation.; IBA-RESPONSE 3 (IBR3); FUNCTIONS IN: acyl-CoA dehydrogenase activity, oxidoreductase activity; INVOLVED IN: root hair elongation; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acyl-CoA oxidase/dehydrogenase, type1/2, C-terminal (InterPro:IPR013764), Acyl-CoA oxidase/dehydrogenase, type 1 (InterPro:IPR006090), Acyl-CoA dehydrogenase/oxidase (InterPro:IPR009100), Acyl-CoA dehydrogenase/oxidase, N-terminal (InterPro:IPR013786), Acyl-CoA oxidase/dehydrogenase, central domain (InterPro:IPR006091), Acyl-CoA dehydrogenase/oxidase C-terminal (InterPro:IPR009075), Protein kinase-like domain (InterPro:IPR011009), Acyl-CoA dehydrogenase, N-terminal (InterPro:IPR006092), Aminoglycoside phosphotransferase (InterPro:IPR002575); BEST Arabidopsis thaliana protein match is: isovaleryl-CoA-dehydrogenase (TAIR:AT3G45300.1); Has 35245 Blast hits to 35197 proteins in 1774 species: Archae - 552; Bacteria - 22616; Metazoa - 1388; Fungi - 871; Plants - 174; Viruses - 0; Other Eukaryotes - 9644 (source: NCBI BLink). & (reliability: 746.0) & (original description: no original description) 0.8978585377684605 64 evm.model.tig00000403.88 no hits & (original description: no original description) 0.8972421207897817 58 evm.model.tig00001336.19 no hits & (original description: no original description) 0.8970629052992873 37 evm.model.tig00000857.26 no hits & (original description: no original description) 0.8939485425184531 76 evm.model.tig00000198.4 no hits & (original description: no original description) 0.8939047336083161 53 evm.model.tig00020848.80 no hits & (original description: no original description) 0.8937473474198091 46 evm.model.tig00000241.189 (at2g39130 : 82.4) Transmembrane amino acid transporter family protein; FUNCTIONS IN: amino acid transmembrane transporter activity; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT3G54830.1); Has 5002 Blast hits to 4966 proteins in 291 species: Archae - 22; Bacteria - 61; Metazoa - 1689; Fungi - 998; Plants - 1489; Viruses - 3; Other Eukaryotes - 740 (source: NCBI BLink). & (reliability: 164.8) & (original description: no original description) 0.8922684675740149 61 evm.model.tig00020614.32 no hits & (original description: no original description) 0.8891996468474306 59 evm.model.tig00000144.78 no hits & (original description: no original description) 0.8882318704223607 59 evm.model.tig00020554.61 no hits & (original description: no original description) 0.8874148192625503 62 evm.model.tig00000980.20 no hits & (original description: no original description) 0.8860514787237589 73 evm.model.tig00001093.23 no hits & (original description: no original description) 0.8853817284064499 74 evm.model.tig00000042.68 no hits & (original description: no original description) 0.8852492299571961 75 evm.model.tig00021462.37 no hits & (original description: no original description) 0.8848164989143247 77 evm.model.tig00001067.2 no hits & (original description: no original description) 0.8844332968178713 78 evm.model.tig00020539.6 no hits & (original description: no original description) 0.8842679394411707 100 evm.model.tig00000451.17 no hits & (original description: no original description) 0.8840233480642491 87 evm.model.tig00020801.80 (at1g04830 : 194.0) Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT4G13730.1). & (reliability: 388.0) & (original description: no original description) 0.8833345060532066 84 evm.model.tig00000254.91 no hits & (original description: no original description) 0.8832428797118824 86 evm.model.tig00001155.9 no hits & (original description: no original description) 0.8829353601096527 90 evm.model.tig00000194.74 (at1g56050 : 186.0) GTP-binding protein-related; FUNCTIONS IN: GTP binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF933 (InterPro:IPR013029), TGS-like (InterPro:IPR012676), GTP1/OBG (InterPro:IPR006073), Conserved hypothetical protein CHP00092 (InterPro:IPR004396), GTP-binding protein, HSR1-related (InterPro:IPR002917), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); BEST Arabidopsis thaliana protein match is: GTP binding (TAIR:AT1G30580.1); Has 18400 Blast hits to 18396 proteins in 3002 species: Archae - 377; Bacteria - 10244; Metazoa - 785; Fungi - 603; Plants - 304; Viruses - 0; Other Eukaryotes - 6087 (source: NCBI BLink). & (reliability: 372.0) & (original description: no original description) 0.8828378626239249 91 evm.model.tig00000254.66 no hits & (original description: no original description) 0.8819925164268715 94 evm.model.tig00000622.17 no hits & (original description: no original description) 0.8819520515019976 95 evm.model.tig00020903.56 (at5g39940 : 114.0) FAD/NAD(P)-binding oxidoreductase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00275, flavoprotein HI0933-like (InterPro:IPR004792). & (reliability: 228.0) & (original description: no original description) 0.8792255252717956 99