Sequence Description Alias PCC hrr evm.model.tig00000342.15 (at1g60890 : 95.5) Phosphatidylinositol-4-phosphate 5-kinase family protein; FUNCTIONS IN: 1-phosphatidylinositol-4-phosphate 5-kinase activity, phosphatidylinositol phosphate kinase activity, ATP binding; INVOLVED IN: phosphatidylinositol metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup (InterPro:IPR016034), Phosphatidylinositol-4-phosphate 5-kinase, plant (InterPro:IPR017163), MORN motif (InterPro:IPR003409), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol-4-phosphate 5-kinase family protein (TAIR:AT1G10900.1). & (q6ex42|pi5k1_orysa : 91.3) Phosphatidylinositol-4-phosphate 5-kinase 1 precursor (EC 2.7.1.68) (1-phosphatidylinositol-4-phosphate kinase) (PIP5K) (PtdIns(4)P-5-kinase) (Diphosphoinositide kinase) - Oryza sativa (Rice) & (reliability: 191.0) & (original description: no original description) 0.9700676888970258 1 evm.model.tig00001542.23 "(at5g08190 : 140.0) ""nuclear factor Y, subunit B12"" (NF-YB12); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit B13 (TAIR:AT5G23090.4); Has 1494 Blast hits to 1494 proteins in 245 species: Archae - 0; Bacteria - 0; Metazoa - 489; Fungi - 378; Plants - 520; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). & (reliability: 280.0) & (original description: no original description)" 0.9530353693208274 3 evm.model.tig00020531.40 no hits & (original description: no original description) 0.9525468612674447 3 evm.model.tig00000133.51 no hits & (original description: no original description) 0.9517041183693339 10 evm.model.tig00000704.72 no hits & (original description: no original description) 0.9476132453459227 7 evm.model.tig00021571.12 (at1g20575 : 304.0) Nucleotide-diphospho-sugar transferases superfamily protein; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT2G39630.1); Has 22705 Blast hits to 22656 proteins in 2589 species: Archae - 933; Bacteria - 16103; Metazoa - 288; Fungi - 260; Plants - 98; Viruses - 23; Other Eukaryotes - 5000 (source: NCBI BLink). & (reliability: 608.0) & (original description: no original description) 0.9351865475779386 6 evm.model.tig00001532.9 no hits & (original description: no original description) 0.9325174637454183 10 evm.model.tig00000944.55 no hits & (original description: no original description) 0.92734744348956 24 evm.model.tig00021742.3 no hits & (original description: no original description) 0.9270780896073751 9 evm.model.tig00000704.43 no hits & (original description: no original description) 0.9250437528831545 10 evm.model.tig00021464.30 (at4g14965 : 102.0) membrane-associated progesterone binding protein 4 (MAPR4); FUNCTIONS IN: heme binding; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: membrane-associated progesterone binding protein 2 (TAIR:AT2G24940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 204.0) & (original description: no original description) 0.9247297237670313 14 evm.model.tig00000319.30 no hits & (original description: no original description) 0.9246323320059696 12 evm.model.tig00000076.92 no hits & (original description: no original description) 0.9214664509668674 13 evm.model.tig00020531.56 no hits & (original description: no original description) 0.9210371968711386 14 evm.model.tig00021123.33 (at5g37055 : 108.0) Encodes SERRATED LEAVES AND EARLY FLOWERING (SEF), an Arabidopsis homolog of the yeast SWC6 protein, a conserved subunit of the SWR1/SRCAP complex. SEF loss-of-function mutants have a pleiotropic phenotype characterized by serrated leaves, frequent absence of inflorescence internodes, bushy aspect, and flowers with altered number and size of organs. sef plants flower earlier than wild-type plants both under inductive and non-inductive photoperiods. SEF, ARP6 and PIE1 might form a molecular complex in Arabidopsis related to the SWR1/SRCAP complex identified in other eukaryotes.; SERRATED LEAVES AND EARLY FLOWERING (SEF); CONTAINS InterPro DOMAIN/s: Zinc finger, HIT-type (InterPro:IPR007529); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 216.0) & (original description: no original description) 0.9195103989132163 15 evm.model.tig00000444.11 (q94hl5|t2ag_orysa : 100.0) Transcription initiation factor IIA gamma chain (TFIIA-gamma) - Oryza sativa (Rice) & (at4g24440 : 99.4) transcription initiation factor IIA gamma chain / TFIIA-gamma (TFIIA-S); FUNCTIONS IN: RNA polymerase II transcription factor activity; INVOLVED IN: transcription initiation from RNA polymerase II promoter; LOCATED IN: transcription factor TFIIA complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription initiation factor IIA, gamma subunit (InterPro:IPR003194), Transcription factor IIA, beta-barrel (InterPro:IPR009088), Transcription initiation factor IIA, gamma subunit, N-terminal (InterPro:IPR015872), Transcription initiation factor IIA, gamma subunit, C-terminal (InterPro:IPR015871), Transcription factor IIA, helical (InterPro:IPR009083); Has 553 Blast hits to 553 proteins in 192 species: Archae - 0; Bacteria - 0; Metazoa - 188; Fungi - 162; Plants - 188; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 198.8) & (original description: no original description) 0.9163296556853177 16 evm.model.tig00021135.24 no hits & (original description: no original description) 0.9130633664189677 17 evm.model.tig00021589.12 (at5g51940 : 113.0) One of two highly similar proteins that can serve as a non-catalytic subunit of nuclear DNA-dependent RNA polymerases II, IV and V; homologous to budding yeast RPB6 and the E. coli RNA polymerase omega subunit. Probably redundant with At2g04630.; NRPB6A; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription, DNA-dependent; LOCATED IN: DNA-directed RNA polymerase V complex, DNA-directed RNA polymerase II, core complex, DNA-directed RNA polymerase IV complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, 14-18kDa subunit, conserved site (InterPro:IPR020708), RNA polymerase subunit, RPB6/omega (InterPro:IPR012293), RNA polymerase Rpb6 (InterPro:IPR006110), DNA-directed RNA polymerase, 14-18kDa subunit (InterPro:IPR006111); BEST Arabidopsis thaliana protein match is: RNA polymerase Rpb6 (TAIR:AT2G04630.1); Has 907 Blast hits to 906 proteins in 313 species: Archae - 223; Bacteria - 0; Metazoa - 99; Fungi - 194; Plants - 79; Viruses - 16; Other Eukaryotes - 296 (source: NCBI BLink). & (reliability: 226.0) & (original description: no original description) 0.9126292984367905 29 evm.model.tig00001249.11 no hits & (original description: no original description) 0.9123167699543832 19 evm.model.tig00000806.51 no hits & (original description: no original description) 0.9122941069203564 20 evm.model.tig00020693.8 (at2g16860 : 147.0) GCIP-interacting family protein; CONTAINS InterPro DOMAIN/s: mRNA splicing factor SYF2 (InterPro:IPR013260); Has 2586 Blast hits to 2013 proteins in 293 species: Archae - 27; Bacteria - 123; Metazoa - 700; Fungi - 265; Plants - 138; Viruses - 7; Other Eukaryotes - 1326 (source: NCBI BLink). & (reliability: 294.0) & (original description: no original description) 0.9114199611055861 44 evm.model.tig00020904.76 no hits & (original description: no original description) 0.910478176741289 22 evm.model.tig00000128.6 no hits & (original description: no original description) 0.9069543597705947 47 evm.model.tig00000241.37 (at5g09920 : 94.0) Non-catalytic subunit specific to DNA-dependent RNA polymerase II; the ortholog of budding yeast RPB4); NRPB4; CONTAINS InterPro DOMAIN/s: HRDC-like (InterPro:IPR010997), RNA polymerase II, Rpb4 (InterPro:IPR005574), RNA polymerase II, Rpb4, core (InterPro:IPR006590); BEST Arabidopsis thaliana protein match is: RNA polymerase II, Rpb4, core protein (TAIR:AT4G15950.1); Has 441 Blast hits to 441 proteins in 181 species: Archae - 4; Bacteria - 0; Metazoa - 144; Fungi - 150; Plants - 95; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). & (reliability: 188.0) & (original description: no original description) 0.9068765067005865 24 evm.model.tig00000144.125 (at3g18430 : 116.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992); BEST Arabidopsis thaliana protein match is: calmodulin 9 (TAIR:AT3G51920.1). & (p04464|calm_wheat : 80.5) Calmodulin (CaM) - Triticum aestivum (Wheat) & (reliability: 232.0) & (original description: no original description) 0.9054417554635502 46 evm.model.tig00020531.47 no hits & (original description: no original description) 0.90104719133887 26 evm.model.tig00000388.39 no hits & (original description: no original description) 0.9003246884670051 27 evm.model.tig00000227.46 (at1g21980 : 101.0) Type I phosphatidylinositol-4-phosphate 5-kinase. Preferentially phosphorylates PtdIns4P. Induced by water stress and abscisic acid in Arabidopsis thaliana. Expressed in procambial cells of leaves, flowers and roots. A N-terminal Membrane Occupation and Recognition Nexus (MORN)affects enzyme activity and distribution.; phosphatidylinositol-4-phosphate 5-kinase 1 (PIP5K1); CONTAINS InterPro DOMAIN/s: Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup (InterPro:IPR016034), Phosphatidylinositol-4-phosphate 5-kinase, plant (InterPro:IPR017163), MORN motif (InterPro:IPR003409), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: phosphatidylinositol-4-phosphate 5-kinase 2 (TAIR:AT1G77740.1); Has 28574 Blast hits to 7954 proteins in 630 species: Archae - 0; Bacteria - 3995; Metazoa - 4425; Fungi - 453; Plants - 2526; Viruses - 0; Other Eukaryotes - 17175 (source: NCBI BLink). & (q6ex42|pi5k1_orysa : 84.0) Phosphatidylinositol-4-phosphate 5-kinase 1 precursor (EC 2.7.1.68) (1-phosphatidylinositol-4-phosphate kinase) (PIP5K) (PtdIns(4)P-5-kinase) (Diphosphoinositide kinase) - Oryza sativa (Rice) & (reliability: 202.0) & (original description: no original description) 0.8998399048482372 77 evm.model.tig00001093.5 no hits & (original description: no original description) 0.8998254469036185 32 evm.model.tig00020562.35 no hits & (original description: no original description) 0.8963519323339687 55 evm.model.tig00000754.29 (p31022|rab7_pea : 311.0) Ras-related protein Rab7 - Pisum sativum (Garden pea) & (at3g16100 : 303.0) RAB GTPase homolog G3C (RABG3c); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog G3D (TAIR:AT1G52280.1); Has 25544 Blast hits to 25522 proteins in 774 species: Archae - 27; Bacteria - 219; Metazoa - 13379; Fungi - 3488; Plants - 2822; Viruses - 20; Other Eukaryotes - 5589 (source: NCBI BLink). & (reliability: 606.0) & (original description: no original description) 0.8957202019957953 46 evm.model.tig00000551.18 no hits & (original description: no original description) 0.8952047532862148 73 evm.model.tig00021534.1 (at3g57550 : 196.0) guanylate kinase; guanylate kinase (AGK2); CONTAINS InterPro DOMAIN/s: Guanylate kinase (InterPro:IPR008144), Guanylate kinase/L-type calcium channel (InterPro:IPR008145), Guanylate kinase, conserved site (InterPro:IPR020590), Guanylate kinase, sub-group (InterPro:IPR017665); BEST Arabidopsis thaliana protein match is: guanylate kinase 1 (TAIR:AT2G41880.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 392.0) & (original description: no original description) 0.8935201351249703 33 evm.model.tig00021493.13 (at1g03910 : 172.0) EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cactin protein, cactus-binding domain, C-terminal (InterPro:IPR019134), Cactin, central region (InterPro:IPR018816); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G36815.2). & (reliability: 344.0) & (original description: no original description) 0.8929866830710804 66 evm.model.tig00001532.8 no hits & (original description: no original description) 0.8919646260958534 35 evm.model.tig00000829.15 no hits & (original description: no original description) 0.8912348223825503 43 evm.model.tig00020564.33 no hits & (original description: no original description) 0.8891111819853885 37 evm.model.tig00000411.74 no hits & (original description: no original description) 0.8888682541622508 58 evm.model.tig00000863.13 no hits & (original description: no original description) 0.888223538305768 39 evm.model.tig00000042.105 no hits & (original description: no original description) 0.8881578860725863 83 evm.model.tig00000319.24 no hits & (original description: no original description) 0.8878802903612854 58 evm.model.tig00020904.75 no hits & (original description: no original description) 0.8872754927139633 42 evm.model.tig00000093.9 no hits & (original description: no original description) 0.8872388005559294 67 evm.model.tig00020903.39 no hits & (original description: no original description) 0.8834041640881867 44 evm.model.tig00000480.70 no hits & (original description: no original description) 0.8828882412868919 45 evm.model.tig00000037.26 no hits & (original description: no original description) 0.8818510682372829 63 evm.model.tig00021127.195 no hits & (original description: no original description) 0.8806890507872224 57 evm.model.tig00021357.13 no hits & (original description: no original description) 0.8799349989209451 85 evm.model.tig00021612.34 no hits & (original description: no original description) 0.8790988270115176 49 evm.model.tig00000342.35 (q9m3t9|dad1_betve : 114.0) Defender against cell death 1 (DAD-1) - Betula verrucosa (White birch) (Betula pendula) & (at1g32210 : 112.0) Encodes protein involved in suppression of apoptosis. Complements a mammalian apoptosis suppressor mutation.; DEFENDER AGAINST APOPTOTIC DEATH 1 (ATDAD1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: anti-apoptosis; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Defender against death DAD protein (InterPro:IPR003038); BEST Arabidopsis thaliana protein match is: Defender against death (DAD family) protein (TAIR:AT2G35520.1); Has 458 Blast hits to 458 proteins in 196 species: Archae - 0; Bacteria - 0; Metazoa - 197; Fungi - 115; Plants - 102; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (reliability: 224.0) & (original description: no original description) 0.8790166782854908 50 evm.model.tig00020610.27 (at1g32130 : 107.0) The C-terminal portion of this protein has high homology to the C-termini of the IWS1 (Interacts With Spt6) proteins found in yeast and humans. Interacts with transcription factor BES1. Involved in brassinosteroid-regulated gene expression.; IWS1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: brassinosteroid mediated signaling pathway, regulation of RNA elongation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor IIS, N-terminal (InterPro:IPR017923); BEST Arabidopsis thaliana protein match is: Transcription elongation factor (TFIIS) family protein (TAIR:AT4G19000.1). & (reliability: 214.0) & (original description: no original description) 0.8782819763301937 51 evm.model.tig00021441.11 no hits & (original description: no original description) 0.8781694790240229 52 evm.model.tig00000194.38 (at4g02720 : 176.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF926 (InterPro:IPR009269); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 352.0) & (original description: no original description) 0.8768848944406424 53 evm.model.tig00001181.21 no hits & (original description: no original description) 0.8767092244868903 54 evm.model.tig00000350.34 no hits & (original description: no original description) 0.8762077301455617 90 evm.model.tig00000037.36 no hits & (original description: no original description) 0.8758652195991694 60 evm.model.tig00000655.49 (at5g19490 : 100.0) Histone superfamily protein; FUNCTIONS IN: sequence-specific DNA binding, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit C11 (TAIR:AT3G12480.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 194.2) & (original description: no original description) 0.8756586390498982 58 evm.model.tig00000319.27 no hits & (original description: no original description) 0.8750994257897247 85 evm.model.tig00000865.35 no hits & (original description: no original description) 0.8749537650590955 59 evm.model.tig00000158.19 no hits & (original description: no original description) 0.8748306055539532 72 evm.model.tig00001164.22 (q39584|dyl3_chlre : 163.0) Dynein 18 kDa light chain, flagellar outer arm - Chlamydomonas reinhardtii & (at2g27030 : 95.5) encodes a calmodulin that has higher affinity to kinesin-like calmodulin binding motor protein than CAM4 or CAM6.; calmodulin 5 (CAM5); FUNCTIONS IN: calcium ion binding; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin 3 (TAIR:AT3G56800.1); Has 36011 Blast hits to 23475 proteins in 1766 species: Archae - 4; Bacteria - 234; Metazoa - 15635; Fungi - 7487; Plants - 7311; Viruses - 0; Other Eukaryotes - 5340 (source: NCBI BLink). & (reliability: 191.0) & (original description: no original description) 0.8745840930132422 61 evm.model.tig00021612.32 no hits & (original description: no original description) 0.8743945998278455 62 evm.model.tig00020912.42 no hits & (original description: no original description) 0.8741325258052062 78 evm.model.tig00000789.40 no hits & (original description: no original description) 0.8728623541358133 89 evm.model.tig00000388.34 no hits & (original description: no original description) 0.8716232573772706 69 evm.model.tig00001487.15 no hits & (original description: no original description) 0.8715662628565614 70 evm.model.tig00000339.13 no hits & (original description: no original description) 0.8715048947180031 71 evm.model.tig00000042.106 (at2g45790 : 301.0) encodes a phosphomannomutase, involved in ascorbate biosynthesis; phosphomannomutase (PMM); FUNCTIONS IN: protein binding, phosphomannomutase activity; INVOLVED IN: L-ascorbic acid biosynthetic process, response to salt stress, mannose biosynthetic process; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Eukaryotic phosphomannomutase (InterPro:IPR005002), HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379); Has 1083 Blast hits to 1081 proteins in 282 species: Archae - 1; Bacteria - 92; Metazoa - 201; Fungi - 171; Plants - 223; Viruses - 0; Other Eukaryotes - 395 (source: NCBI BLink). & (reliability: 602.0) & (original description: no original description) 0.8698152847380646 73 evm.model.tig00000944.30 no hits & (original description: no original description) 0.8696828934816204 74 evm.model.tig00001265.7 (at3g49601 : 98.2) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: mRNA splicing factor, Cwf21 (InterPro:IPR013170); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 196.4) & (original description: no original description) 0.8694882773045455 76 evm.model.tig00000571.48 (at3g22950 : 198.0) A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to ADP-ribosylation factor GB:P91924 (Dugesia japonica), other ARFs and ARF-like proteins.; ADP-ribosylation factor C1 (ARFC1); FUNCTIONS IN: GTP binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: endomembrane system, intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ADP-ribosylation factor (InterPro:IPR006688), Small GTP-binding protein (InterPro:IPR005225), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: ADP-ribosylation factor 1 (TAIR:AT1G23490.1). & (p51823|arf2_orysa : 171.0) ADP-ribosylation factor 2 - Oryza sativa (Rice) & (reliability: 396.0) & (original description: no original description) 0.8683496818562488 77 evm.model.tig00000076.108 no hits & (original description: no original description) 0.8668899865048529 100 evm.model.tig00022075.29 (at4g31720 : 120.0) Arabidopsis thaliana putative TBP-associated 15 kDa subunit protein (TAFII15); TBP-associated factor II 15 (TAFII15); FUNCTIONS IN: RNA polymerase II transcription factor activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: transcription initiation; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription initiation factor TFIID, 23-30kDa subunit (InterPro:IPR003923); Has 372 Blast hits to 372 proteins in 163 species: Archae - 0; Bacteria - 0; Metazoa - 153; Fungi - 132; Plants - 56; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (reliability: 240.0) & (original description: no original description) 0.8668341655252043 80 evm.model.tig00021281.10 no hits & (original description: no original description) 0.8667559557443925 91 evm.model.tig00020912.48 no hits & (original description: no original description) 0.8664654352827854 92 evm.model.tig00000158.111 (at2g03430 : 88.6) Ankyrin repeat family protein; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat protein (TAIR:AT5G66055.1); Has 130068 Blast hits to 38689 proteins in 1585 species: Archae - 162; Bacteria - 14649; Metazoa - 59864; Fungi - 13189; Plants - 7735; Viruses - 2061; Other Eukaryotes - 32408 (source: NCBI BLink). & (reliability: 177.2) & (original description: no original description) 0.8636801448101006 86 evm.model.tig00020710.77 no hits & (original description: no original description) 0.8633956537742655 86 evm.model.tig00021319.66 (at5g56130 : 202.0) Encodes a component of the putative Arabidopsis THO/TREX complex: THO1 or HPR1 (At5g09860), THO2 (At1g24706), THO3 or TEX1 (At5g56130), THO5 (At5g42920, At1g45233), THO6 (At2g19430), and THO7 (At5g16790, At3g02950). THO/TREX complexes in animals have been implicated in the transport of mRNA precursors. Mutants of THO3/TEX1, THO1, THO6 accumulate reduced amount of small interfering (si)RNA, suggesting a role of the putative Arabidopsis THO/TREX in siRNA biosynthesis.; TEX1; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: WD-40 repeat family protein (TAIR:AT5G67320.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 404.0) & (original description: no original description) 0.8613428250667869 88 evm.model.tig00000217.43 (at4g12790 : 293.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleotide binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function, ATP binding (InterPro:IPR004130); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G22370.2); Has 1465 Blast hits to 1454 proteins in 282 species: Archae - 123; Bacteria - 0; Metazoa - 415; Fungi - 412; Plants - 158; Viruses - 0; Other Eukaryotes - 357 (source: NCBI BLink). & (reliability: 586.0) & (original description: no original description) 0.8608062163090928 89 evm.model.tig00020918.16 no hits & (original description: no original description) 0.8588801671773463 92 evm.model.tig00000383.29 (at1g54140 : 131.0) putative TATA binding protein associated factor 21kDa; TATA binding protein associated factor 21kDa subunit (TAFII21); FUNCTIONS IN: transcription initiation factor activity, DNA binding; INVOLVED IN: transcription initiation; LOCATED IN: transcription factor TFIID complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor TAFII-31 (InterPro:IPR003162), Histone-fold (InterPro:IPR009072); Has 434 Blast hits to 434 proteins in 170 species: Archae - 0; Bacteria - 2; Metazoa - 206; Fungi - 130; Plants - 53; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink). & (reliability: 262.0) & (original description: no original description) 0.858424697024502 94 evm.model.tig00000741.23 no hits & (original description: no original description) 0.8580814858145117 95 evm.model.tig00021319.68 (at1g61780 : 93.2) postsynaptic protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Microtubule-associated protein CRIPT (InterPro:IPR019367); Has 230 Blast hits to 228 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 116; Fungi - 46; Plants - 56; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 186.4) & (original description: no original description) 0.8578499088996668 96 evm.model.tig00000113.121 (p04352|calm_chlre : 127.0) Calmodulin (CaM) - Chlamydomonas reinhardtii & (at5g21274 : 122.0) Encodes a calmodulin isoform. Expressed in leaves.; calmodulin 6 (CAM6); FUNCTIONS IN: calcium ion binding; INVOLVED IN: calcium-mediated signaling; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell, leaf; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin 5 (TAIR:AT2G27030.3); Has 34463 Blast hits to 23268 proteins in 1758 species: Archae - 4; Bacteria - 213; Metazoa - 14512; Fungi - 7798; Plants - 6959; Viruses - 0; Other Eukaryotes - 4977 (source: NCBI BLink). & (reliability: 244.0) & (original description: no original description) 0.8575596458155665 99 evm.model.tig00000144.178 (at3g18430 : 121.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992); BEST Arabidopsis thaliana protein match is: calmodulin 9 (TAIR:AT3G51920.1). & (reliability: 242.0) & (original description: no original description) 0.8572313292707477 100