Sequence Description Alias PCC hrr evm.model.tig00001130.11 no hits & (original description: no original description) 0.9611507923523182 4 evm.model.tig00000042.236 (at1g27320 : 119.0) Encodes a histidine kinases, a cytokinin receptor that controls cytokinin-mediated leaf longevity through a specific phosphorylation of the response regulator, ARR2.; histidine kinase 3 (HK3); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 2 (TAIR:AT5G35750.1); Has 124308 Blast hits to 110912 proteins in 3043 species: Archae - 772; Bacteria - 110408; Metazoa - 31; Fungi - 2185; Plants - 2022; Viruses - 28; Other Eukaryotes - 8862 (source: NCBI BLink). & (o48929|etr1_tobac : 94.0) Ethylene receptor (EC 2.7.13.3) (NT-ETR1) - Nicotiana tabacum (Common tobacco) & (reliability: 238.0) & (original description: no original description) 0.960277358342335 2 evm.model.tig00021580.2 (at5g45380 : 340.0) DEGRADATION OF UREA 3 (DUR3); CONTAINS InterPro DOMAIN/s: Sodium/solute symporter, subgroup (InterPro:IPR019900), Sodium/solute symporter (InterPro:IPR001734); Has 9388 Blast hits to 9377 proteins in 1702 species: Archae - 173; Bacteria - 6389; Metazoa - 719; Fungi - 340; Plants - 51; Viruses - 0; Other Eukaryotes - 1716 (source: NCBI BLink). & (reliability: 680.0) & (original description: no original description) 0.9601302076564144 3 evm.model.tig00000254.130 no hits & (original description: no original description) 0.9584937812601233 4 evm.model.tig00000863.36 no hits & (original description: no original description) 0.9582995777072135 5 evm.model.tig00021462.25 no hits & (original description: no original description) 0.956479345915626 6 evm.model.tig00021462.15 no hits & (original description: no original description) 0.9541355205518961 7 evm.model.tig00021534.7 no hits & (original description: no original description) 0.9540895290635077 8 evm.model.tig00020943.76 no hits & (original description: no original description) 0.9532281197652285 9 evm.model.tig00000076.169 no hits & (original description: no original description) 0.9512930741816871 10 evm.model.tig00020557.24 no hits & (original description: no original description) 0.9463287799803424 11 evm.model.tig00001128.2 (at4g25350 : 168.0) SHB1 encodes a nuclear and cytosolic protein that has motifs homologous with SYG1 protein family members. Acts in cryptochrome signaling. Overexpression of SHB1 enhanced the expression of PHYTOCHROME-INTERACTING FACTOR4 (PIF4) under red light and promoted proteasome-mediated degradation of phytochrome A and hypocotyl elongation under far-red light. A knockout allele suppressed LONG HYPOCOTYL IN FAR-RED LIGHT1 (HFR1) expression and showed several deetiolation phenotypes. Acts upstream of HFR1. Regulates seed development.; SHORT HYPOCOTYL UNDER BLUE1 (SHB1); CONTAINS InterPro DOMAIN/s: EXS, C-terminal (InterPro:IPR004342), SPX, N-terminal (InterPro:IPR004331); BEST Arabidopsis thaliana protein match is: EXS (ERD1/XPR1/SYG1) family protein (TAIR:AT1G35350.1); Has 1169 Blast hits to 1111 proteins in 205 species: Archae - 2; Bacteria - 6; Metazoa - 265; Fungi - 425; Plants - 309; Viruses - 0; Other Eukaryotes - 162 (source: NCBI BLink). & (reliability: 336.0) & (original description: no original description) 0.9461569838681453 12 evm.model.tig00000145.1 no hits & (original description: no original description) 0.9454449159507773 26 evm.model.tig00021571.10 no hits & (original description: no original description) 0.9450771566218189 14 evm.model.tig00020908.14 no hits & (original description: no original description) 0.9427197024163531 15 evm.model.tig00021603.8 (at4g29880 : 96.3) Encodes PIRL7, a member of the Plant Intracellular Ras-group-related LRRs (Leucine rich repeat proteins). PIRLs are a distinct, plant-specific class of intracellular LRRs that likely mediate protein interactions, possibly in the context of signal transduction.; plant intracellular ras group-related LRR 7 (PIRL7); CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: plant intracellular ras group-related LRR 6 (TAIR:AT2G19330.1); Has 62582 Blast hits to 28443 proteins in 1064 species: Archae - 25; Bacteria - 6458; Metazoa - 27380; Fungi - 2135; Plants - 22921; Viruses - 26; Other Eukaryotes - 3637 (source: NCBI BLink). & (reliability: 176.4) & (original description: no original description) 0.9425914302032061 16 evm.model.tig00000900.35 (at1g51350 : 201.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid lumen; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); Has 1374 Blast hits to 1058 proteins in 203 species: Archae - 0; Bacteria - 0; Metazoa - 493; Fungi - 490; Plants - 280; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). & (reliability: 402.0) & (original description: no original description) 0.9421053785953369 17 evm.model.tig00020553.68 (at5g40200 : 238.0) Encodes a putative DegP protease.; DegP protease 9 (DegP9); FUNCTIONS IN: serine-type peptidase activity, catalytic activity, serine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: nucleolus, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Serine/cysteine peptidase, trypsin-like (InterPro:IPR009003), Serine endopeptidase DegP2 (InterPro:IPR015724), Peptidase S1C, HrtA/DegP2/Q/S (InterPro:IPR001940), Peptidase S1/S6, chymotrypsin/Hap (InterPro:IPR001254), PDZ/DHR/GLGF (InterPro:IPR001478); BEST Arabidopsis thaliana protein match is: DEGP protease 2 (TAIR:AT2G47940.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 476.0) & (original description: no original description) 0.9397355038558212 18 evm.model.tig00000692.66 no hits & (original description: no original description) 0.9387611665016639 19 evm.model.tig00000042.169 no hits & (original description: no original description) 0.9372712936511842 20 evm.model.tig00020660.23 (at4g10180 : 270.0) Encodes a nuclear-localized protein that acts as a repressor of photomorphogenesis and may be involved in chromatin remodeling.; DE-ETIOLATED 1 (DET1); FUNCTIONS IN: catalytic activity; INVOLVED IN: DNA repair, negative regulation of photomorphogenesis; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: De-etiolated protein 1, Det1 (InterPro:IPR019138), Six-hairpin glycosidase-like (InterPro:IPR008928); Has 248 Blast hits to 240 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 106; Fungi - 0; Plants - 132; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 540.0) & (original description: no original description) 0.9355362291001638 21 evm.model.tig00021179.24 no hits & (original description: no original description) 0.9354466001515646 22 evm.model.tig00000480.62 no hits & (original description: no original description) 0.9320978255373517 26 evm.model.tig00000385.17 no hits & (original description: no original description) 0.928985669083048 31 evm.model.tig00020909.10 no hits & (original description: no original description) 0.9288354726258027 25 evm.model.tig00021537.35 no hits & (original description: no original description) 0.9286973167814816 26 evm.model.tig00000448.87 no hits & (original description: no original description) 0.9286934358062953 27 evm.model.tig00000403.38 no hits & (original description: no original description) 0.9284422212772658 28 evm.model.tig00000383.96 (at2g32000 : 420.0) DNA topoisomerase, type IA, core; FUNCTIONS IN: DNA topoisomerase activity, DNA topoisomerase type I activity, DNA binding, nucleic acid binding; INVOLVED IN: DNA topological change, DNA unwinding involved in replication, DNA metabolic process; LOCATED IN: endomembrane system, chromosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Toprim domain, subgroup (InterPro:IPR006154), DNA topoisomerase, type IA, central region, subdomain 1 (InterPro:IPR013824), DNA topoisomerase, type IA, core (InterPro:IPR000380), Toprim domain (InterPro:IPR006171), DNA topoisomerase, type IA, DNA-binding (InterPro:IPR003602), DNA topoisomerase, type IA, domain 2 (InterPro:IPR003601), DNA topoisomerase, type IA, central (InterPro:IPR013497), DNA topoisomerase, type IA, central region, subdomain 3 (InterPro:IPR013826); BEST Arabidopsis thaliana protein match is: topoisomerase 3alpha (TAIR:AT5G63920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 840.0) & (original description: no original description) 0.9283528007494297 29 evm.model.tig00000857.24 (at5g23630 : 129.0) A member of the eukaryotic type V subfamily (P5) of P-type ATPase cation pumps; MIA is most similar to the human P5 ATPase ATY2(44% identity) and to Spf1p from S. cerevisiae (41% identity). Highly abundant in the endoplasmic reticulum and small vesicles of developing pollen grains and tapetum cells. T-DNA insertional mutants of MIA suffer from imbalances in cation homeostasis and exhibit a severe reduction in fertility. Mutant microspores fail to separate from tetrads and pollen grains are fragile with an abnormal morphology and altered cell wall structure. MIA is also named PDR2 and was shown to be required for proper expression of SCARECROW (SCR), a key regulator of root patterning, and for stem-cell maintenance in Pi-deprived roots.; phosphate deficiency response 2 (PDR2); FUNCTIONS IN: cation-transporting ATPase activity; INVOLVED IN: in 6 processes; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, unknown pump specificity (type V) (InterPro:IPR006544), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: calcium ATPase 2 (TAIR:AT4G37640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 258.0) & (original description: no original description) 0.9282316613846395 38 evm.model.tig00000025.35 no hits & (original description: no original description) 0.9282276645985761 31 evm.model.tig00000254.102 no hits & (original description: no original description) 0.9279183873290436 37 evm.model.tig00020816.32 (at2g31900 : 200.0) Encodes an novel myosin isoform.; myosin-like protein XIF (XIF); CONTAINS InterPro DOMAIN/s: Dil domain (InterPro:IPR018444), Dilute (InterPro:IPR002710), Myosin, N-terminal, SH3-like (InterPro:IPR004009), Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: Myosin family protein with Dil domain (TAIR:AT5G20490.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 372.0) & (original description: no original description) 0.9278950168976988 41 evm.model.tig00000131.7 (at5g35750 : 89.7) Encodes histidine kinase AHK2.; histidine kinase 2 (HK2); FUNCTIONS IN: osmosensor activity, cytokinin receptor activity, protein histidine kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 3 (TAIR:AT1G27320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 179.4) & (original description: no original description) 0.9277242581177485 34 evm.model.tig00001021.9 no hits & (original description: no original description) 0.9275869657618415 35 evm.model.tig00000802.58 no hits & (original description: no original description) 0.9274968594799268 48 evm.model.tig00000310.58 no hits & (original description: no original description) 0.9271515993121424 37 evm.model.tig00021037.10 no hits & (original description: no original description) 0.9265566824354573 42 evm.model.tig00000025.33 no hits & (original description: no original description) 0.9264269961144757 39 evm.model.tig00021038.42 no hits & (original description: no original description) 0.9259091697323169 40 evm.model.tig00000743.18 no hits & (original description: no original description) 0.9258879600183562 41 evm.model.tig00001376.13 no hits & (original description: no original description) 0.9256756287612639 42 evm.model.tig00000451.7 no hits & (original description: no original description) 0.9253204107532388 68 evm.model.tig00001073.9 no hits & (original description: no original description) 0.92452309953565 44 evm.model.tig00000076.124 no hits & (original description: no original description) 0.9244949218347518 45 evm.model.tig00020878.3 no hits & (original description: no original description) 0.9243658528259715 76 evm.model.tig00000042.27 no hits & (original description: no original description) 0.9240770369912834 50 evm.model.tig00020876.19 (at5g53080 : 80.5) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; LOCATED IN: chloroplast; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 161.0) & (original description: no original description) 0.9238018268451117 48 evm.model.tig00000553.51 no hits & (original description: no original description) 0.9231419106244919 57 evm.model.tig00021721.24 no hits & (original description: no original description) 0.9228689488448253 50 evm.model.tig00020562.46 no hits & (original description: no original description) 0.9225121945645944 51 evm.model.tig00000405.21 no hits & (original description: no original description) 0.921540122280292 53 evm.model.tig00001234.9 no hits & (original description: no original description) 0.9215061087953796 54 evm.model.tig00000076.115 no hits & (original description: no original description) 0.9210088968224682 55 evm.model.tig00021246.9 no hits & (original description: no original description) 0.9209219505230802 56 evm.model.tig00000310.63 no hits & (original description: no original description) 0.9209206806011186 77 evm.model.tig00020816.36 no hits & (original description: no original description) 0.9204131758376147 58 evm.model.tig00000204.49 no hits & (original description: no original description) 0.9193993933737107 59 evm.model.tig00020629.29 no hits & (original description: no original description) 0.9192601397217914 60 evm.model.tig00000215.35 (at2g35920 : 234.0) RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G04895.1); Has 15667 Blast hits to 10761 proteins in 1709 species: Archae - 0; Bacteria - 5024; Metazoa - 4470; Fungi - 1848; Plants - 1329; Viruses - 777; Other Eukaryotes - 2219 (source: NCBI BLink). & (reliability: 424.0) & (original description: no original description) 0.9186643860985276 61 evm.model.tig00020610.75 no hits & (original description: no original description) 0.9184484007222613 62 evm.model.tig00000480.50 no hits & (original description: no original description) 0.918361976506067 88 evm.model.tig00020848.40 no hits & (original description: no original description) 0.9182429726833591 64 evm.model.tig00021440.7 no hits & (original description: no original description) 0.9181357243357116 65 evm.model.tig00001292.23 no hits & (original description: no original description) 0.9170422668575379 66 evm.model.tig00000241.8 no hits & (original description: no original description) 0.9167531921272376 97 evm.model.tig00020999.5 no hits & (original description: no original description) 0.916173513241677 69 evm.model.tig00021070.99 no hits & (original description: no original description) 0.9161720246844033 70 evm.model.tig00000215.111 no hits & (original description: no original description) 0.9161624070094346 71 evm.model.tig00000113.5 no hits & (original description: no original description) 0.9149525310910668 73 evm.model.tig00020660.55 no hits & (original description: no original description) 0.9149267431085775 74 evm.model.tig00000215.22 (q6eu10|mta70_orysa : 369.0) Probable N6-adenosine-methyltransferase MT-A70-like (EC 2.1.1.62) - Oryza sativa (Rice) & (at4g10760 : 368.0) mRNAadenosine methylase (MTA); FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity; INVOLVED IN: embryo development ending in seed dormancy, mRNA methylation; LOCATED IN: nuclear speck, chloroplast; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MT-A70 (InterPro:IPR007757); BEST Arabidopsis thaliana protein match is: Methyltransferase MT-A70 family protein (TAIR:AT4G09980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 736.0) & (original description: no original description) 0.9143370724650117 75 evm.model.tig00000849.16 no hits & (original description: no original description) 0.9140822295135702 76 evm.model.tig00000829.29 no hits & (original description: no original description) 0.9140815442797989 77 evm.model.tig00000042.26 no hits & (original description: no original description) 0.9139165535431671 78 evm.model.tig00000459.7 no hits & (original description: no original description) 0.9139060519527373 79 evm.model.tig00000145.27 no hits & (original description: no original description) 0.9136936797054995 80 evm.model.tig00021037.67 no hits & (original description: no original description) 0.913375119360756 81 evm.model.tig00001535.3 no hits & (original description: no original description) 0.9130712129906182 82 evm.model.tig00000983.15 no hits & (original description: no original description) 0.9128834519302623 83 evm.model.tig00000448.6 (at5g22980 : 132.0) serine carboxypeptidase-like 47 (scpl47); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 48 (TAIR:AT3G45010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p52712|cbpx_orysa : 129.0) Serine carboxypeptidase-like precursor (EC 3.4.16.-) - Oryza sativa (Rice) & (reliability: 256.0) & (original description: no original description) 0.9126550364527042 84 evm.model.tig00000093.132 no hits & (original description: no original description) 0.9120832624258579 85 evm.model.tig00000492.85 no hits & (original description: no original description) 0.9120569063289502 86 evm.model.tig00000269.38 no hits & (original description: no original description) 0.9119942190491275 87 evm.model.tig00020904.159 no hits & (original description: no original description) 0.9118981945382174 88 evm.model.tig00000718.18 no hits & (original description: no original description) 0.9116485313753718 89 evm.model.tig00000498.98 no hits & (original description: no original description) 0.9112419366571299 90 evm.model.tig00021493.58 no hits & (original description: no original description) 0.9108699427116774 91 evm.model.tig00020614.81 no hits & (original description: no original description) 0.9107380999976745 92 evm.model.tig00000498.13 no hits & (original description: no original description) 0.9104597070394664 95 evm.model.tig00021522.9 no hits & (original description: no original description) 0.9095156494136448 97 evm.model.tig00000581.13 no hits & (original description: no original description) 0.9094729413382386 98 evm.model.tig00021126.26 no hits & (original description: no original description) 0.9093975754011573 99 evm.model.tig00000900.13 no hits & (original description: no original description) 0.9091841556479134 100