Sequence Description Alias PCC hrr evm.model.tig00001264.28 (at1g49760 : 371.0) polyadenylate-binding protein, putative / PABP, putative, similar to poly(A)-binding protein GB:AAF66825 GI:7673359 from (Nicotiana tabacum). Highly and ubiquitously expressed. Member of the class II PABP family.; poly(A) binding protein 8 (PAB8); CONTAINS InterPro DOMAIN/s: Polyadenylate-binding protein/Hyperplastic disc protein (InterPro:IPR002004), RNA recognition motif, RNP-1 (InterPro:IPR000504), Polyadenylate binding protein, human types 1, 2, 3, 4 (InterPro:IPR006515), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: poly(A) binding protein 2 (TAIR:AT4G34110.1). & (q08935|roc1_nicsy : 89.7) 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A) - Nicotiana sylvestris (Wood tobacco) & (reliability: 742.0) & (original description: no original description) 0.9336388630436324 11 evm.model.tig00021489.56 no hits & (original description: no original description) 0.9307612581001649 5 evm.model.tig00021434.51 no hits & (original description: no original description) 0.9289464673403338 7 evm.model.tig00000949.20 no hits & (original description: no original description) 0.9173699398572427 16 evm.model.tig00020909.60 no hits & (original description: no original description) 0.9138272076697339 7 evm.model.tig00001310.12 no hits & (original description: no original description) 0.9126411772206522 14 evm.model.tig00000254.118 no hits & (original description: no original description) 0.911787050245378 69 evm.model.tig00021612.61 no hits & (original description: no original description) 0.9110625578019627 32 evm.model.tig00000403.63 no hits & (original description: no original description) 0.9037892112890453 27 evm.model.tig00000459.59 no hits & (original description: no original description) 0.9023172213868008 14 evm.model.tig00001574.11 no hits & (original description: no original description) 0.9021807953739556 31 evm.model.tig00020710.11 no hits & (original description: no original description) 0.9011634738906592 21 evm.model.tig00000396.8 (at3g01090 : 117.0) encodes a SNF1-related protein kinase that physically interacts with SCF subunit SKP1/ASK1 and 20S proteosome subunit PAD1. It can also interact with PRL1 DWD-containing protein. Based on in vitro degradation assays and cul4cs and prl1 mutants, there is evidence that AKIN10 is degraded in a proteasome-dependent manner, and that this depends on a CUL4-PRL1 E3 ligase; SNF1 kinase homolog 10 (KIN10); FUNCTIONS IN: protein binding, protein serine/threonine kinase activity, protein kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: nuclear ubiquitin ligase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Kinase-associated KA1 (InterPro:IPR001772), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Protein kinase, Snf1-like AMPK (InterPro:IPR015741), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: SNF1 kinase homolog 11 (TAIR:AT3G29160.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q02723|rkin1_secce : 99.4) Carbon catabolite derepressing protein kinase (EC 2.7.11.1) - Secale cereale (Rye) & (reliability: 230.0) & (original description: no original description) 0.9011544417893247 14 evm.model.tig00000939.4 no hits & (original description: no original description) 0.900917897843157 15 evm.model.tig00020912.62 no hits & (original description: no original description) 0.9005725106079842 74 evm.model.tig00001130.13 no hits & (original description: no original description) 0.9003475171750277 22 evm.model.tig00020610.141 no hits & (original description: no original description) 0.8991082063314103 18 evm.model.tig00020892.11 no hits & (original description: no original description) 0.8980452530346538 36 evm.model.tig00000113.119 (at5g07910 : 91.7) Leucine-rich repeat (LRR) family protein; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30105.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 165.6) & (original description: no original description) 0.8970830139820126 61 evm.model.tig00020903.50 no hits & (original description: no original description) 0.8965794429259925 40 evm.model.tig00001041.18 no hits & (original description: no original description) 0.8957181633680853 23 evm.model.tig00000385.29 no hits & (original description: no original description) 0.8952640299708812 66 evm.model.tig00001629.2 no hits & (original description: no original description) 0.8937268116612396 54 evm.model.tig00000073.43 no hits & (original description: no original description) 0.8935954108128534 26 evm.model.tig00000269.53 no hits & (original description: no original description) 0.8935264934128909 27 evm.model.tig00000190.24 no hits & (original description: no original description) 0.8920451223236362 38 evm.model.tig00000339.25 (at1g08600 : 146.0) ATRX; FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: homolog of RAD54 (TAIR:AT3G19210.1). & (q7g8y3|isw2_orysa : 88.6) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 292.0) & (original description: no original description) 0.8907380305470803 95 evm.model.tig00021105.29 no hits & (original description: no original description) 0.8905457517226822 30 evm.model.tig00000254.80 no hits & (original description: no original description) 0.8903703192392112 53 evm.model.tig00021365.20 (at1g15520 : 132.0) ABC transporter family involved in ABA transport and resistance to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers, stomata and roots.; pleiotropic drug resistance 12 (PDR12); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 11 (TAIR:AT1G66950.1); Has 377983 Blast hits to 279992 proteins in 3946 species: Archae - 7615; Bacteria - 304057; Metazoa - 8776; Fungi - 6428; Plants - 5794; Viruses - 2; Other Eukaryotes - 45311 (source: NCBI BLink). & (q8gu92|pdr2_orysa : 129.0) Probable pleiotropic drug resistance protein 2 - Oryza sativa (Rice) & (reliability: 264.0) & (original description: no original description) 0.8903101341571146 48 evm.model.tig00021518.24 no hits & (original description: no original description) 0.8895165339921116 33 evm.model.tig00021438.7 no hits & (original description: no original description) 0.8893970028038247 34 evm.model.tig00020943.57 (o81122|etr1_maldo : 128.0) Ethylene receptor (EC 2.7.13.3) - Malus domestica (Apple) (Malus sylvestris) & (at1g66340 : 123.0) Similar to prokaryote sensory transduction proteins. Contains a histidine kinase and a response regulator domain. Homodimer. Membrane component. Binds ethylene. Mutations affect ethylene binding and metabolism of other plant hormones such as auxin, cytokinins, ABA and gibberellic acid. Ethylene receptor. Has histidine kinase activity. Is regulated by RTE1.; ETHYLENE RESPONSE 1 (ETR1); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), Signal transduction histidine kinase, core (InterPro:IPR005467), Signal transduction histidine kinase, hybrid-type, ethylene sensor (InterPro:IPR014525), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), GAF (InterPro:IPR003018), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: ethylene response sensor 1 (TAIR:AT2G40940.1); Has 102721 Blast hits to 98263 proteins in 3046 species: Archae - 757; Bacteria - 90102; Metazoa - 18; Fungi - 1611; Plants - 2314; Viruses - 21; Other Eukaryotes - 7898 (source: NCBI BLink). & (reliability: 226.0) & (original description: no original description) 0.8892964913360101 49 evm.model.tig00001574.12 no hits & (original description: no original description) 0.888295375621867 37 evm.model.tig00021037.68 (at1g26240 : 107.0) Proline-rich extensin-like family protein; FUNCTIONS IN: structural constituent of cell wall; INVOLVED IN: plant-type cell wall organization; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Extensin-like repeat (InterPro:IPR006706); BEST Arabidopsis thaliana protein match is: Proline-rich extensin-like family protein (TAIR:AT4G08370.1); Has 364257 Blast hits to 37887 proteins in 1520 species: Archae - 1099; Bacteria - 63371; Metazoa - 128573; Fungi - 46566; Plants - 64812; Viruses - 9875; Other Eukaryotes - 49961 (source: NCBI BLink). & (q9fpq6|gp1_chlre : 101.0) Vegetative cell wall protein gp1 precursor (Hydroxyproline-rich glycoprotein 1) - Chlamydomonas reinhardtii & (reliability: 192.6) & (original description: no original description) 0.888274571520277 76 evm.model.tig00000826.18 no hits & (original description: no original description) 0.8877815523112008 52 evm.model.tig00000254.55 (at5g04040 : 80.5) Encodes a triacylglycerol lipase that is involved in storage lipid breakdown during seed germination. The mutant plant exhibits a much slower rate of postgerminative growth than the wild type.; SUGAR-DEPENDENT1 (SDP1); CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Protein of unknown function DUF3336 (InterPro:IPR021771), ARF/SAR superfamily (InterPro:IPR006689), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: sugar-dependent 1-like (TAIR:AT3G57140.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 161.0) & (original description: no original description) 0.8876356514411621 64 evm.model.tig00020800.14 no hits & (original description: no original description) 0.8841710652803414 54 evm.model.tig00020629.48 no hits & (original description: no original description) 0.8838951004850686 51 evm.model.tig00001629.1 no hits & (original description: no original description) 0.8819971011441619 47 evm.model.tig00000215.122 no hits & (original description: no original description) 0.8814323006772915 48 evm.model.tig00000093.243 (at4g16440 : 120.0) Encodes a [FeFe]-hydrogenase-like protein named Gollum (for Growth in different Oxygen LeveLs inflUences Morphogenesis). Heterologous expression of Gollum in E. coli indicates that it probably contains two [Fe-S] clusters with different magnetic properties. Sequence alignment analysis indicates that these two clusters would be topologically equivalent to the mesial and proximal [Fe-S] centers of [FeFe]-hydrogenases. Knockdown mutants (RNAi) show a dwarf phenotype at the normal atmospheric partial oxygen pressure of 21 kPa. This dwarf phenotype could be rescued by growing the plant under low oxygen pressure (5kPa), suggesting a role for this gene in oxygen sensing.; ferredoxin hydrogenases; CONTAINS InterPro DOMAIN/s: Iron hydrogenase, large subunit, C-terminal (InterPro:IPR004108), Iron hydrogenase (InterPro:IPR009016), Iron hydrogenase, small subunit-like (InterPro:IPR003149); Has 2574 Blast hits to 2544 proteins in 612 species: Archae - 1; Bacteria - 1826; Metazoa - 221; Fungi - 188; Plants - 72; Viruses - 0; Other Eukaryotes - 266 (source: NCBI BLink). & (reliability: 240.0) & (original description: no original description) 0.8799034058084618 64 evm.model.tig00020564.15 no hits & (original description: no original description) 0.879740021304716 56 evm.model.tig00000157.45 no hits & (original description: no original description) 0.879360604649965 60 evm.model.tig00020537.81 no hits & (original description: no original description) 0.8770029767764492 60 evm.model.tig00020552.5 no hits & (original description: no original description) 0.8764957392578592 63 evm.model.tig00021070.97 no hits & (original description: no original description) 0.8764722105566729 93 evm.model.tig00000123.5 no hits & (original description: no original description) 0.8758088666897312 78 evm.model.tig00000970.6 no hits & (original description: no original description) 0.8757727197443808 70 evm.model.tig00000654.18 no hits & (original description: no original description) 0.8748813401637243 89 evm.model.tig00020603.81 no hits & (original description: no original description) 0.8746800923840499 74 evm.model.tig00000737.9 no hits & (original description: no original description) 0.8738014238847706 77 evm.model.tig00000269.42 no hits & (original description: no original description) 0.8717425625225821 83 evm.model.tig00000133.45 no hits & (original description: no original description) 0.8716103934270798 84 evm.model.tig00020951.60 no hits & (original description: no original description) 0.8712633200839227 88 evm.model.tig00000241.168 no hits & (original description: no original description) 0.870922145932266 87 evm.model.tig00020927.25 "(at5g52400 : 84.3) member of CYP715A; ""cytochrome P450, family 715, subfamily A, polypeptide 1"" (CYP715A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to salt stress; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 735, subfamily A, polypeptide 1 (TAIR:AT5G38450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 168.6) & (original description: no original description)" 0.8707179340933646 89 evm.model.tig00020943.68 no hits & (original description: no original description) 0.8705283940459803 90 evm.model.tig00021489.55 no hits & (original description: no original description) 0.8704688420596347 91 evm.model.tig00020629.69 (at5g25150 : 80.1) Encodes a putative TATA-binding-protein associated factor TAF5. TAFs are subunits of the general transcription factor IID (TFIID).; TBP-associated factor 5 (TAF5); FUNCTIONS IN: transcription regulator activity, nucleotide binding; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: guard cell, root, inflorescence, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781), TFIID subunit, WD40-associated region (InterPro:IPR007582); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 114463 Blast hits to 42274 proteins in 991 species: Archae - 68; Bacteria - 11258; Metazoa - 46869; Fungi - 25620; Plants - 15010; Viruses - 3; Other Eukaryotes - 15635 (source: NCBI BLink). & (reliability: 160.2) & (original description: no original description) 0.869505862374436 94 evm.model.tig00000444.28 no hits & (original description: no original description) 0.8694514975546207 95 evm.model.tig00020964.29 no hits & (original description: no original description) 0.868777043979409 97 evm.model.tig00020816.61 no hits & (original description: no original description) 0.8687206862393039 98