Sequence Description Alias PCC hrr evm.model.tig00000388.42 no hits & (original description: no original description) 0.9563302976892702 1 evm.model.tig00001484.1 no hits & (original description: no original description) 0.9359854645008053 2 evm.model.tig00001623.3 (at5g05560 : 98.2) Arabidopsis thaliana E3 ubiquitin ligase; EMBRYO DEFECTIVE 2771 (EMB2771); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 196.4) & (original description: no original description) 0.9359022996786439 10 evm.model.tig00000940.6 no hits & (original description: no original description) 0.918729921668341 20 evm.model.tig00021037.43 no hits & (original description: no original description) 0.9133170700426838 6 evm.model.tig00021432.14 no hits & (original description: no original description) 0.9131397707739487 6 evm.model.tig00021582.42 no hits & (original description: no original description) 0.9121359328050591 7 evm.model.tig00001604.6 no hits & (original description: no original description) 0.9106051822538828 8 evm.model.tig00000912.39 (at5g08710 : 85.9) Regulator of chromosome condensation (RCC1) family protein; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family protein (TAIR:AT5G63860.1); Has 22297 Blast hits to 6326 proteins in 481 species: Archae - 85; Bacteria - 2816; Metazoa - 7462; Fungi - 1554; Plants - 2765; Viruses - 0; Other Eukaryotes - 7615 (source: NCBI BLink). & (reliability: 171.8) & (original description: no original description) 0.9072114352088038 21 evm.model.tig00020684.16 (at2g18950 : 135.0) Encodes homogentisate phytyltransferase involved in tocopherol biosynthesis. Has impact on seed longevity and plays a role in the adaptation to low temperature stress, notably phloem loading.; homogentisate phytyltransferase 1 (HPT1); CONTAINS InterPro DOMAIN/s: UbiA prenyltransferase (InterPro:IPR000537); BEST Arabidopsis thaliana protein match is: homogentisate prenyltransferase (TAIR:AT3G11945.1); Has 1047 Blast hits to 1044 proteins in 315 species: Archae - 194; Bacteria - 477; Metazoa - 7; Fungi - 6; Plants - 190; Viruses - 0; Other Eukaryotes - 173 (source: NCBI BLink). & (reliability: 270.0) & (original description: no original description) 0.9067826244736509 20 evm.model.tig00000350.24 no hits & (original description: no original description) 0.9067798468331564 11 evm.model.tig00001056.23 no hits & (original description: no original description) 0.906420638444886 16 evm.model.tig00021276.11 (at1g73990 : 144.0) Encodes a putative protease SppA (SppA).; signal peptide peptidase (SPPA); FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: proteolysis, response to light intensity; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S49, protease IV (InterPro:IPR004634), Peptidase S49 (InterPro:IPR002142), Peptidase S49, SppA (InterPro:IPR004635); Has 9340 Blast hits to 7649 proteins in 1706 species: Archae - 204; Bacteria - 6183; Metazoa - 9; Fungi - 4; Plants - 52; Viruses - 43; Other Eukaryotes - 2845 (source: NCBI BLink). & (reliability: 288.0) & (original description: no original description) 0.9052792463157237 13 evm.model.tig00000025.52 no hits & (original description: no original description) 0.9017508400783206 49 evm.model.tig00001224.12 no hits & (original description: no original description) 0.9014411939990945 17 evm.model.tig00020848.46 no hits & (original description: no original description) 0.9006053404309015 96 evm.model.tig00021127.19 no hits & (original description: no original description) 0.8958467655848951 22 evm.model.tig00020938.22 no hits & (original description: no original description) 0.8927000285698852 18 evm.model.tig00021073.57 no hits & (original description: no original description) 0.8891003497530969 19 evm.model.tig00020734.41 no hits & (original description: no original description) 0.8887007764010202 79 evm.model.tig00021795.6 no hits & (original description: no original description) 0.8882014948005927 21 evm.model.tig00000237.24 no hits & (original description: no original description) 0.8872491468799902 22 evm.model.tig00021612.42 no hits & (original description: no original description) 0.8862090037297219 32 evm.model.tig00021319.22 no hits & (original description: no original description) 0.8852179474537984 30 evm.model.tig00000147.72 (at1g27320 : 163.0) Encodes a histidine kinases, a cytokinin receptor that controls cytokinin-mediated leaf longevity through a specific phosphorylation of the response regulator, ARR2.; histidine kinase 3 (HK3); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 2 (TAIR:AT5G35750.1); Has 124308 Blast hits to 110912 proteins in 3043 species: Archae - 772; Bacteria - 110408; Metazoa - 31; Fungi - 2185; Plants - 2022; Viruses - 28; Other Eukaryotes - 8862 (source: NCBI BLink). & (o81122|etr1_maldo : 115.0) Ethylene receptor (EC 2.7.13.3) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 326.0) & (original description: no original description) 0.8851843422313654 25 evm.model.tig00000754.9 no hits & (original description: no original description) 0.8839907218513818 29 evm.model.tig00020960.83 no hits & (original description: no original description) 0.8833423077324944 27 evm.model.tig00000241.164 no hits & (original description: no original description) 0.8819913575228024 64 evm.model.tig00001038.27 (at3g13290 : 87.8) varicose-related (VCR); FUNCTIONS IN: nucleotide binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G13300.1); Has 1082 Blast hits to 861 proteins in 259 species: Archae - 6; Bacteria - 246; Metazoa - 313; Fungi - 205; Plants - 136; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink). & (reliability: 175.6) & (original description: no original description) 0.8818263960495561 55 evm.model.tig00001628.5 no hits & (original description: no original description) 0.8815772647285552 30 evm.model.tig00020614.3 (at5g28350 : 221.0) Quinoprotein amine dehydrogenase, beta chain-like; RIC1-like guanyl-nucleotide exchange factor; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Ribosome control protein 1 (InterPro:IPR009771), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Quinoprotein amine dehydrogenase, beta chain-like (InterPro:IPR011044); BEST Arabidopsis thaliana protein match is: Quinoprotein amine dehydrogenase, beta chain-like; RIC1-like guanyl-nucleotide exchange factor (TAIR:AT3G61480.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 442.0) & (original description: no original description) 0.8809449270332741 31 evm.model.tig00001229.4 (at5g09860 : 97.1) Encodes a component of the putative Arabidopsis THO/TREX complex: THO1 or HPR1 (At5g09860), THO2 (At1g24706), THO3 or TEX1 (At5g56130), THO5 (At5g42920, At1g45233), THO6 (At2g19430), and THO7 (At5g16790, At3g02950). THO/TREX complexes in animals have been implicated in the transport of mRNA precursors. Mutants of THO3/TEX1, THO1, THO6 accumulate reduced amount of small interfering (si)RNA, suggesting a role of the putative Arabidopsis THO/TREX in siRNA biosynthesis.; THO1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: production of ta-siRNAs involved in RNA interference, gene silencing by RNA; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: THO complex, subunit THOC1 (InterPro:IPR021861). & (reliability: 194.2) & (original description: no original description) 0.8799008963392356 61 evm.model.tig00000655.10 no hits & (original description: no original description) 0.879557777170897 33 evm.model.tig00020572.39 no hits & (original description: no original description) 0.8767248131796834 70 evm.model.tig00001729.1 no hits & (original description: no original description) 0.8763777690437474 36 evm.model.tig00001042.15 no hits & (original description: no original description) 0.8760834451513062 37 evm.model.tig00020560.20 no hits & (original description: no original description) 0.8759926985712327 38 evm.model.tig00020554.56 no hits & (original description: no original description) 0.8755930567586644 75 evm.model.tig00020710.91 no hits & (original description: no original description) 0.8749897411345472 67 evm.model.tig00000808.20 no hits & (original description: no original description) 0.874302466160161 51 evm.model.tig00001302.2 no hits & (original description: no original description) 0.8740083666605762 43 evm.model.tig00000093.130 no hits & (original description: no original description) 0.8723185816569002 44 evm.model.tig00000737.38 no hits & (original description: no original description) 0.8711691123061651 65 evm.model.tig00000989.49 no hits & (original description: no original description) 0.8707686765284997 47 evm.model.tig00021318.26 no hits & (original description: no original description) 0.8680798039046806 49 evm.model.tig00020675.7 no hits & (original description: no original description) 0.8680420292405713 50 evm.model.tig00020930.5 no hits & (original description: no original description) 0.8675956880127864 51 evm.model.tig00000498.54 no hits & (original description: no original description) 0.8674183083063101 52 evm.model.tig00000640.17 no hits & (original description: no original description) 0.8662219988438429 55 evm.model.tig00000282.13 no hits & (original description: no original description) 0.8650667306673722 59 evm.model.tig00001331.14 no hits & (original description: no original description) 0.8633552444652197 58 evm.model.tig00000663.31 (at3g60740 : 192.0) Encodes tubulin-folding cofactor D. Mutants arrest during embryogenesis with embryos that are small, mushroom-shaped ('pilz') and consist of only one or few large cells each containing one or more variably enlarged nuclei and often cell wall stubs. Gene product necessary for continuous microtubule organization.; TITAN 1 (TTN1); CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 384.0) & (original description: no original description) 0.8631494210721387 59 evm.model.tig00001154.4 (at3g63460 : 140.0) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G18830.1). & (reliability: 280.0) & (original description: no original description) 0.862984141451999 60 evm.model.tig00021617.17 no hits & (original description: no original description) 0.8611607201879652 75 evm.model.tig00020848.21 (at1g79650 : 108.0) Encodes a member of the RADIATION SENSITIVE23 (RAD23) family: AT1G16190(RAD23A), AT1G79650(RAD23B), AT3G02540(RAD23C), AT5G38470(RAD23D). RAD23 proteins play an essential role in the cell cycle, morphology, and fertility of plants through their delivery of UPS (ubiquitin/26S proteasome system) substrates to the 26S proteasome.; RADIATION SENSITIVE23B (RAD23B); FUNCTIONS IN: damaged DNA binding, ubiquitin binding, proteasome binding; INVOLVED IN: proteasomal ubiquitin-dependent protein catabolic process, base-excision repair, nucleotide-excision repair; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), UV excision repair protein Rad23 (InterPro:IPR004806), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), XPC-binding domain (InterPro:IPR015360), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Rad23 UV excision repair protein family (TAIR:AT1G16190.1). & (reliability: 216.0) & (original description: no original description) 0.8606563144409896 62 evm.model.tig00021038.99 (at3g08505 : 137.0) zinc finger (CCCH-type/C3HC4-type RING finger) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 274.0) & (original description: no original description) 0.8594509361706426 64 evm.model.tig00020930.26 no hits & (original description: no original description) 0.8569137484773675 68 evm.model.tig00021179.70 no hits & (original description: no original description) 0.8550120194603428 89 evm.model.tig00000480.75 (at3g52140 : 126.0) tetratricopeptide repeat (TPR)-containing protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G28080.1). & (reliability: 252.0) & (original description: no original description) 0.8543966374107879 73 evm.model.tig00001003.18 no hits & (original description: no original description) 0.853826316167149 75 evm.model.tig00020961.51 (at2g25050 : 104.0) Actin-binding FH2 (Formin Homology) protein; FUNCTIONS IN: actin binding; INVOLVED IN: cellular component organization, actin cytoskeleton organization; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Actin-binding FH2 (InterPro:IPR015425), Tensin phosphatase, C2 domain (InterPro:IPR014020); BEST Arabidopsis thaliana protein match is: Actin-binding FH2/DRF autoregulatory protein (TAIR:AT3G32400.1). & (reliability: 189.4) & (original description: no original description) 0.8533444599501484 77 evm.model.tig00021122.8 no hits & (original description: no original description) 0.8528251364747961 78 evm.model.tig00020553.56 (at3g05090 : 105.0) Encodes a DCAF protein. Mutants are defective in lateral root development and suggest roles for DDB1≠Cul4ñmediated protein degradation in regulating auxin accumulation during lateral root primordium development and lateral root meristem emergence.; LATERAL ROOT STIMULATOR 1 (LRS1); FUNCTIONS IN: nucleotide binding; INVOLVED IN: lateral root formation; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Protein of unknown function DUF3337 (InterPro:IPR021772), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Coatomer, alpha subunit (TAIR:AT1G62020.1); Has 59803 Blast hits to 26869 proteins in 729 species: Archae - 50; Bacteria - 7042; Metazoa - 23770; Fungi - 14096; Plants - 7202; Viruses - 3; Other Eukaryotes - 7640 (source: NCBI BLink). & (reliability: 210.0) & (original description: no original description) 0.8524481934969931 79 evm.model.tig00020849.5 no hits & (original description: no original description) 0.852234991548823 81 evm.model.tig00000402.68 (at5g44740 : 94.7) Y-family DNA polymerase. Catalyses translesion synthesis in response to UV damage. Functionally interacts with PCNA2. Has a ubiquitin binding motif.; Y-family DNA polymerase H (POLH); CONTAINS InterPro DOMAIN/s: DNA polymerase eta (InterPro:IPR017061), DNA-repair protein, UmuC-like (InterPro:IPR001126), DNA-repair protein, UmuC-like, N-terminal (InterPro:IPR017963); BEST Arabidopsis thaliana protein match is: DNA-directed DNA polymerases (TAIR:AT5G44750.1); Has 8088 Blast hits to 8015 proteins in 2292 species: Archae - 210; Bacteria - 5635; Metazoa - 500; Fungi - 401; Plants - 163; Viruses - 3; Other Eukaryotes - 1176 (source: NCBI BLink). & (reliability: 189.4) & (original description: no original description) 0.8513451571877396 82 evm.model.tig00021293.20 no hits & (original description: no original description) 0.8496310740187489 84 evm.model.tig00021314.14 no hits & (original description: no original description) 0.8496148461861971 85 evm.model.tig00000269.32 no hits & (original description: no original description) 0.8481315671509359 86 evm.model.tig00021073.43 no hits & (original description: no original description) 0.8469226203231126 87 evm.model.tig00020849.4 no hits & (original description: no original description) 0.8463126810617594 91 evm.model.tig00020537.57 no hits & (original description: no original description) 0.8440530944428981 94 evm.model.tig00000821.40 no hits & (original description: no original description) 0.8423725056084427 99