Sequence Description Alias PCC hrr evm.model.tig00000829.12 (at4g37190 : 85.1) LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Misato Segment II, myosin-like (InterPro:IPR019605), Tubulin/FtsZ, N-terminal (InterPro:IPR019746); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 170.2) & (original description: no original description) 0.9076746135643142 6 evm.model.tig00021589.24 (at2g13540 : 267.0) Encodes a nuclear cap-binding protein that forms a heterodimeric complex with CBP20 and is involved in ABA signaling and flowering. Mutants are early flowering and exhibit hypersensitive response to ABA in germination inhibition.Loss of ABH1 function results in abnormal processing of mRNAs for several important floral regulators (FLC, CO, FLM). Analysis of loss of function mutations suggests a role in pri-miRNA processing and mRNA splicing. Note that two different mutant alleles were given the same name abh1-7 (Kuhn et al 2007; Kim et al 2008). To avoid confusion, abh1-7 described in Kim et al (2008) has been renamed abh1-107 (other names: ensalada-1, ens-1).; ABA HYPERSENSITIVE 1 (ABH1); CONTAINS InterPro DOMAIN/s: MIF4G-like, type 2 (InterPro:IPR015174), MIF4G-like, type 1 (InterPro:IPR015172), Armadillo-type fold (InterPro:IPR016024), MIF4G-like, type 3 (InterPro:IPR003890), MIF4-like, type 1/2/3 (InterPro:IPR016021); Has 514 Blast hits to 510 proteins in 229 species: Archae - 0; Bacteria - 96; Metazoa - 188; Fungi - 131; Plants - 55; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (reliability: 534.0) & (original description: no original description) 0.9072520825263176 22 evm.model.tig00000037.19 no hits & (original description: no original description) 0.8990708588410286 13 evm.model.tig00000076.75 no hits & (original description: no original description) 0.8976181344946148 14 evm.model.tig00000944.33 (at5g67530 : 196.0) plant U-box 49 (PUB49); FUNCTIONS IN: ubiquitin-protein ligase activity, peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding, protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), U box domain (InterPro:IPR003613), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892); BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT1G01940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 392.0) & (original description: no original description) 0.8946853872386642 5 evm.model.tig00020538.14 (at2g19560 : 210.0) encodes a protein with a PAM domain involved in ethylene signaling. eer5 mutants show ethylene hypersensitivity in relation to hypocotyl elongation. EER5 interacts with EIN2 and with COP9 in Y2H assays. EIN3 protein levels are the same in WT and eer5-1 mutants. EER5 may be involved in promoting a dampening of the ethylene response.; ENHANCED ETHYLENE RESPONSE 5 (EER5); CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717), PCI/PINT associated module (InterPro:IPR013143); Has 771 Blast hits to 770 proteins in 220 species: Archae - 0; Bacteria - 0; Metazoa - 260; Fungi - 323; Plants - 58; Viruses - 0; Other Eukaryotes - 130 (source: NCBI BLink). & (reliability: 420.0) & (original description: no original description) 0.8906316746752726 22 evm.model.tig00020553.256 (at2g31320 : 144.0) Abiotic Stress-inducible gene.; poly(ADP-ribose) polymerase 2 (PARP2); FUNCTIONS IN: NAD+ ADP-ribosyltransferase activity, NAD or NADH binding, DNA binding, zinc ion binding; INVOLVED IN: DNA repair, response to oxidative stress, response to abscisic acid stimulus, protein amino acid ADP-ribosylation, response to abiotic stimulus; LOCATED IN: intracellular, nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: PADR1 (InterPro:IPR012982), Zinc finger, PARP-type (InterPro:IPR001510), WGR (InterPro:IPR008893), Poly(ADP-ribose) polymerase, regulatory domain (InterPro:IPR004102), NAD+ ADP-ribosyltransferase (InterPro:IPR008288), Poly(ADP-ribose) polymerase, catalytic domain (InterPro:IPR012317), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: NAD+ ADP-ribosyltransferases;NAD+ ADP-ribosyltransferases (TAIR:AT5G22470.1); Has 1243 Blast hits to 1018 proteins in 163 species: Archae - 0; Bacteria - 14; Metazoa - 746; Fungi - 100; Plants - 173; Viruses - 2; Other Eukaryotes - 208 (source: NCBI BLink). & (q9zsv1|parp1_maize : 144.0) Poly [ADP-ribose] polymerase 1 (EC 2.4.2.30) (PARP-1) (ADPRT 1) (NAD(+) ADP-ribosyltransferase 1) (Poly[ADP-ribose] synthetase 1) - Zea mays (Maize) & (reliability: 288.0) & (original description: no original description) 0.8900282073837978 8 evm.model.tig00000789.44 (at1g14850 : 173.0) Encodes a protein similar to nucleoporin, a a major component of the nuclear pore complex (NPC) involved in cellular nucleo-cytoplasmic transport; nucleoporin 155 (NUP155); FUNCTIONS IN: nucleocytoplasmic transporter activity; INVOLVED IN: nucleocytoplasmic transport; LOCATED IN: nucleolus, plasma membrane, chloroplast, nuclear pore; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoporin, Nup133/Nup155-like, N-terminal (InterPro:IPR014908), Nucleoporin, Nup155-like (InterPro:IPR004870), Nucleoporin, Nup133/Nup155-like, C-terminal (InterPro:IPR007187); Has 459 Blast hits to 396 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 159; Fungi - 168; Plants - 85; Viruses - 0; Other Eukaryotes - 47 (source: NCBI BLink). & (reliability: 346.0) & (original description: no original description) 0.8890321149556056 11 evm.model.tig00000944.22 (at1g77180 : 322.0) Encodes a putative transcriptional factor. Shows transcriptional activator activity in yeast. Involved in response to abscisic acid, salt and osmotic stress.; SKIP; CONTAINS InterPro DOMAIN/s: SKI-interacting protein, SKIP (InterPro:IPR017862), SKI-interacting protein SKIP, SNW domain (InterPro:IPR004015). & (reliability: 644.0) & (original description: no original description) 0.8853991368452622 10 evm.model.tig00020553.231 no hits & (original description: no original description) 0.8835847406948698 10 evm.model.tig00020531.57 (at5g18940 : 172.0) Mo25 family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mo25-like (InterPro:IPR013878), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Mo25 family protein (TAIR:AT5G47540.1); Has 565 Blast hits to 563 proteins in 185 species: Archae - 0; Bacteria - 0; Metazoa - 217; Fungi - 137; Plants - 151; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink). & (reliability: 344.0) & (original description: no original description) 0.8823786386295966 12 evm.model.tig00000093.13 no hits & (original description: no original description) 0.8822537136682633 33 evm.model.tig00020903.17 (at2g47330 : 453.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G20920.1); Has 46798 Blast hits to 46047 proteins in 3085 species: Archae - 817; Bacteria - 24489; Metazoa - 6167; Fungi - 4661; Plants - 2616; Viruses - 11; Other Eukaryotes - 8037 (source: NCBI BLink). & (p46942|db10_nicsy : 280.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 906.0) & (original description: no original description) 0.8802951772457442 13 evm.model.tig00022075.56 no hits & (original description: no original description) 0.8795156995401592 46 evm.model.tig00000402.71 (p46869|fla10_chlre : 269.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (at3g50240 : 211.0) Encodes a kinesin-related protein.; KICP-02; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G47820.2); Has 66961 Blast hits to 44643 proteins in 2038 species: Archae - 551; Bacteria - 6888; Metazoa - 33106; Fungi - 5668; Plants - 4311; Viruses - 105; Other Eukaryotes - 16332 (source: NCBI BLink). & (reliability: 422.0) & (original description: no original description) 0.8771183450966904 15 evm.model.tig00000842.4 (at5g66020 : 348.0) Mutants in this gene are unable to express female sterility in response to beta-aminobutyric acid, as wild type plants do. non-consensus AT donor splice site at exon 7, TA donor splice site at exon 10, AT acceptor splice at exon 13.; SUPPRESSOR OF ACTIN 1B (ATSAC1B); CONTAINS InterPro DOMAIN/s: Synaptojanin, N-terminal (InterPro:IPR002013); BEST Arabidopsis thaliana protein match is: Phosphoinositide phosphatase family protein (TAIR:AT3G51460.1); Has 1740 Blast hits to 1632 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 569; Fungi - 574; Plants - 290; Viruses - 0; Other Eukaryotes - 307 (source: NCBI BLink). & (reliability: 690.0) & (original description: no original description) 0.8767893877013728 49 evm.model.tig00020934.33 (at1g69670 : 839.0) cullin, putative, contains similarity to Cullin homolog 3 (CUL-3) SP:Q13618, GI:3639052 from (Homo sapiens); contains Pfam profile PF00888: Cullin family. Interacts with members of AtBPM family and RBX1 suggesting it is part of an E3 ligase complex involved in RUB modification.; cullin 3B (CUL3B); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Cullin homology (InterPro:IPR016158), Cullin protein, neddylation domain (InterPro:IPR019559), Cullin, N-terminal (InterPro:IPR001373), Cullin repeat-like-containing domain (InterPro:IPR016159); BEST Arabidopsis thaliana protein match is: cullin 3 (TAIR:AT1G26830.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1678.0) & (original description: no original description) 0.8767472360344045 50 evm.model.tig00020723.68 no hits & (original description: no original description) 0.8681333774729372 86 evm.model.tig00000944.32 (at5g67530 : 121.0) plant U-box 49 (PUB49); FUNCTIONS IN: ubiquitin-protein ligase activity, peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding, protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), U box domain (InterPro:IPR003613), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892); BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT1G01940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 242.0) & (original description: no original description) 0.8678253511107813 21 evm.model.tig00000692.82 no hits & (original description: no original description) 0.866286994037235 81 evm.model.tig00000197.16 (at2g45950 : 137.0) SKP1-like 20 (SK20); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: SCF ubiquitin ligase complex; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: SKP1 component, dimerisation (InterPro:IPR016072), SKP1 component (InterPro:IPR001232), BTB/POZ fold (InterPro:IPR011333); BEST Arabidopsis thaliana protein match is: SKP1-like 21 (TAIR:AT3G61415.1); Has 1496 Blast hits to 1480 proteins in 265 species: Archae - 0; Bacteria - 13; Metazoa - 562; Fungi - 181; Plants - 479; Viruses - 9; Other Eukaryotes - 252 (source: NCBI BLink). & (reliability: 274.0) & (original description: no original description) 0.8659728227707834 80 evm.model.tig00001718.2 no hits & (original description: no original description) 0.8640889645635904 22 evm.model.tig00000881.9 no hits & (original description: no original description) 0.863528574825887 63 evm.model.tig00001154.10 (at5g51300 : 295.0) splicing factor-related; FUNCTIONS IN: RNA binding, zinc ion binding, nucleotide binding, nucleic acid binding; INVOLVED IN: RNA splicing; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087), K Homology, type 1, subgroup (InterPro:IPR018111), RNA recognition motif, RNP-1 (InterPro:IPR000504), K Homology, type 1 (InterPro:IPR004088), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT1G09660.1); Has 82686 Blast hits to 53020 proteins in 1818 species: Archae - 38; Bacteria - 8214; Metazoa - 37936; Fungi - 14163; Plants - 12444; Viruses - 1255; Other Eukaryotes - 8636 (source: NCBI BLink). & (reliability: 590.0) & (original description: no original description) 0.8612298088671463 25 evm.model.tig00020556.4 no hits & (original description: no original description) 0.8597495033301982 75 evm.model.tig00000350.15 (at5g54260 : 369.0) DNA repair and meiotic recombination protein, component of MRE11 complex with RAD50 and NBS1; MEIOTIC RECOMBINATION 11 (MRE11); FUNCTIONS IN: hydrolase activity, manganese ion binding, protein serine/threonine phosphatase activity, exonuclease activity, endonuclease activity; INVOLVED IN: double-strand break repair, DNA metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), DNA repair exonuclease (InterPro:IPR003701), Mre11, DNA-binding (InterPro:IPR007281); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 738.0) & (original description: no original description) 0.8595642909802691 27 evm.model.tig00000737.26 no hits & (original description: no original description) 0.8572427134021916 33 evm.model.tig00021502.2 (at3g49600 : 223.0) Encodes a ubiquitin-specific protease which catalyzes deubiquitination of histone H2B and is required for heterochromatin silencing.Loss of function mutations display autonomous endosperm development and embryo arrest. Loss of function also results in an increase in expression of the PcG complex target gene PHE1.; ubiquitin-specific protease 26 (UBP26); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: seed development; LOCATED IN: nucleolus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin-specific peptidase, DUSP domain (InterPro:IPR006615), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 13 (TAIR:AT3G11910.1); Has 7210 Blast hits to 6677 proteins in 263 species: Archae - 0; Bacteria - 2; Metazoa - 3696; Fungi - 1305; Plants - 848; Viruses - 3; Other Eukaryotes - 1356 (source: NCBI BLink). & (reliability: 446.0) & (original description: no original description) 0.8570964589727983 29 evm.model.tig00021348.91 no hits & (original description: no original description) 0.856409981919167 30 evm.model.tig00020909.8 (at3g60910 : 115.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G17365.1); Has 1732 Blast hits to 1731 proteins in 520 species: Archae - 43; Bacteria - 761; Metazoa - 337; Fungi - 50; Plants - 206; Viruses - 0; Other Eukaryotes - 335 (source: NCBI BLink). & (reliability: 230.0) & (original description: no original description) 0.853601192222367 31 evm.model.tig00021036.34 no hits & (original description: no original description) 0.8515738676829576 88 evm.model.tig00021319.36 (at5g41790 : 115.0) encodes a protein that physically interacts specifically with the putative coiled-coil region of COP1 in vitro. In hypocotyl and cotyledon protoplasts, it is associated to the cytoskeleton, but not in the root. expression is not regulated by light.; COP1-interactive protein 1 (CIP1); FUNCTIONS IN: protein binding; INVOLVED IN: regulation of protein import into nucleus; LOCATED IN: cytoskeleton, plasma membrane, chloroplast, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin (InterPro:IPR009053); BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT1G64330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q9m7j4|mfp1_tobac : 98.2) MAR-binding filament-like protein 1-1 - Nicotiana tabacum (Common tobacco) & (reliability: 230.0) & (original description: no original description) 0.8506431447697383 51 evm.model.tig00000076.110 no hits & (original description: no original description) 0.8496771236576176 43 evm.model.tig00000402.35 no hits & (original description: no original description) 0.849655403924362 83 evm.model.tig00020553.255 no hits & (original description: no original description) 0.8490010700083178 60 evm.model.tig00000704.40 (at2g20330 : 340.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: TBP-associated factor 5 (TAIR:AT5G25150.1); Has 32306 Blast hits to 19564 proteins in 654 species: Archae - 48; Bacteria - 6195; Metazoa - 11628; Fungi - 6530; Plants - 3814; Viruses - 23; Other Eukaryotes - 4068 (source: NCBI BLink). & (reliability: 680.0) & (original description: no original description) 0.8473031380768934 65 evm.model.tig00020909.31 (at3g24730 : 172.0) mRNA splicing factor, thioredoxin-like U5 snRNP; FUNCTIONS IN: catalytic activity; INVOLVED IN: mitosis; LOCATED IN: spliceosomal complex; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), mRNA splicing factor, thioredoxin-like U5 snRNP (InterPro:IPR004123), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: mRNA splicing factor, thioredoxin-like U5 snRNP (TAIR:AT5G08290.1); Has 535 Blast hits to 535 proteins in 209 species: Archae - 0; Bacteria - 0; Metazoa - 213; Fungi - 146; Plants - 109; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (reliability: 344.0) & (original description: no original description) 0.8465617498384628 53 evm.model.tig00001154.12 (at4g38740 : 131.0) Encodes cytosolic cyclophilin ROC1.; rotamase CYP 1 (ROC1); FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding, response to cadmium ion, signal transduction; LOCATED IN: cytosol, apoplast, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892); BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT2G21130.1); Has 16514 Blast hits to 16480 proteins in 2670 species: Archae - 108; Bacteria - 6825; Metazoa - 2927; Fungi - 1383; Plants - 1289; Viruses - 4; Other Eukaryotes - 3978 (source: NCBI BLink). & (p24525|cyph_brana : 129.0) Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) - Brassica napus (Rape) & (reliability: 262.0) & (original description: no original description) 0.8463218534975641 43 evm.model.tig00000970.27 no hits & (original description: no original description) 0.8461372319737586 44 evm.model.tig00021435.10 no hits & (original description: no original description) 0.8441056240417871 50 evm.model.tig00001269.5 (at2g17440 : 100.0) Encodes PIRL5, a member of the Plant Intracellular Ras-group-related LRRs (Leucine rich repeat proteins). PIRLs are a distinct, plant-specific class of intracellular LRRs that likely mediate protein interactions, possibly in the context of signal transduction.; plant intracellular ras group-related LRR 5 (PIRL5); LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: plant intracellular ras group-related LRR 4 (TAIR:AT4G35470.1); Has 100264 Blast hits to 38283 proteins in 1358 species: Archae - 22; Bacteria - 10106; Metazoa - 37622; Fungi - 3439; Plants - 42778; Viruses - 28; Other Eukaryotes - 6269 (source: NCBI BLink). & (reliability: 188.8) & (original description: no original description) 0.8434244290046419 50 evm.model.tig00020903.14 (at3g48380 : 286.0) Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2 (InterPro:IPR012462). & (reliability: 572.0) & (original description: no original description) 0.8432898174329464 51 evm.model.tig00000057.79 no hits & (original description: no original description) 0.8414126333180406 52 evm.model.tig00000113.28 no hits & (original description: no original description) 0.8396009131078046 88 evm.model.tig00000842.2 (at3g26560 : 568.0) ATP-dependent RNA helicase, putative; FUNCTIONS IN: in 6 functions; LOCATED IN: cytosol, mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Domain of unknown function DUF1605 (InterPro:IPR011709), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase family protein (TAIR:AT1G32490.2); Has 53052 Blast hits to 35825 proteins in 3176 species: Archae - 195; Bacteria - 13845; Metazoa - 17201; Fungi - 5520; Plants - 3365; Viruses - 1203; Other Eukaryotes - 11723 (source: NCBI BLink). & (reliability: 1136.0) & (original description: no original description) 0.8395032961934714 54 evm.model.tig00000342.14 (at1g21980 : 133.0) Type I phosphatidylinositol-4-phosphate 5-kinase. Preferentially phosphorylates PtdIns4P. Induced by water stress and abscisic acid in Arabidopsis thaliana. Expressed in procambial cells of leaves, flowers and roots. A N-terminal Membrane Occupation and Recognition Nexus (MORN)affects enzyme activity and distribution.; phosphatidylinositol-4-phosphate 5-kinase 1 (PIP5K1); CONTAINS InterPro DOMAIN/s: Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup (InterPro:IPR016034), Phosphatidylinositol-4-phosphate 5-kinase, plant (InterPro:IPR017163), MORN motif (InterPro:IPR003409), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: phosphatidylinositol-4-phosphate 5-kinase 2 (TAIR:AT1G77740.1); Has 28574 Blast hits to 7954 proteins in 630 species: Archae - 0; Bacteria - 3995; Metazoa - 4425; Fungi - 453; Plants - 2526; Viruses - 0; Other Eukaryotes - 17175 (source: NCBI BLink). & (q6ex42|pi5k1_orysa : 110.0) Phosphatidylinositol-4-phosphate 5-kinase 1 precursor (EC 2.7.1.68) (1-phosphatidylinositol-4-phosphate kinase) (PIP5K) (PtdIns(4)P-5-kinase) (Diphosphoinositide kinase) - Oryza sativa (Rice) & (reliability: 266.0) & (original description: no original description) 0.8390653977673399 55 evm.model.tig00000737.8 no hits & (original description: no original description) 0.8390265246301575 60 evm.model.tig00021433.3 no hits & (original description: no original description) 0.8372105288881012 59 evm.model.tig00000319.20 (at1g73660 : 122.0) Encodes a protein with similarity to MAPKKKs. May function as a negative regulator of salt tolerance.; protein tyrosine kinase family protein; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Ubiquitin interacting motif (InterPro:IPR003903), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G18160.1); Has 126827 Blast hits to 124278 proteins in 4857 species: Archae - 98; Bacteria - 13376; Metazoa - 48156; Fungi - 11388; Plants - 33654; Viruses - 503; Other Eukaryotes - 19652 (source: NCBI BLink). & (reliability: 244.0) & (original description: no original description) 0.8369994535207383 63 evm.model.tig00000073.38 no hits & (original description: no original description) 0.836581832705398 80 evm.model.tig00000331.7 no hits & (original description: no original description) 0.836443055223273 62 evm.model.tig00021012.34 (at5g51280 : 653.0) DEAD-box protein abstrakt, putative; FUNCTIONS IN: helicase activity, zinc ion binding, ATP-dependent helicase activity, nucleic acid binding, ATP binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Zinc finger, CCHC-type (InterPro:IPR001878), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT4G33370.1); Has 46358 Blast hits to 45535 proteins in 3129 species: Archae - 906; Bacteria - 23651; Metazoa - 6388; Fungi - 4930; Plants - 2690; Viruses - 10; Other Eukaryotes - 7783 (source: NCBI BLink). & (p46942|db10_nicsy : 246.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1270.0) & (original description: no original description) 0.8361772165065753 64 evm.model.tig00001376.14 no hits & (original description: no original description) 0.8343053017135389 65 evm.model.tig00021502.1 no hits & (original description: no original description) 0.8313809010320651 66 evm.model.tig00021238.13 no hits & (original description: no original description) 0.8312305178583216 67 evm.model.tig00020911.51 no hits & (original description: no original description) 0.831188226202902 68 evm.model.tig00021348.33 no hits & (original description: no original description) 0.8298050573886666 71 evm.model.tig00000241.177 no hits & (original description: no original description) 0.8292185086549163 73 evm.model.tig00001206.15 (at5g28740 : 754.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: RNA processing; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT helix (InterPro:IPR003107), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026); BEST Arabidopsis thaliana protein match is: crooked neck protein, putative / cell cycle protein, putative (TAIR:AT5G45990.1); Has 2811 Blast hits to 1455 proteins in 237 species: Archae - 16; Bacteria - 22; Metazoa - 987; Fungi - 875; Plants - 477; Viruses - 0; Other Eukaryotes - 434 (source: NCBI BLink). & (reliability: 1508.0) & (original description: no original description) 0.8282070174813446 87 evm.model.tig00000955.17 no hits & (original description: no original description) 0.8280499996027967 76 evm.model.tig00020629.13 no hits & (original description: no original description) 0.8275533452350172 77 evm.model.tig00021037.59 no hits & (original description: no original description) 0.825410178820744 80 evm.model.tig00000865.24 no hits & (original description: no original description) 0.8240992345055344 82 evm.model.tig00020531.45 no hits & (original description: no original description) 0.8238630759934928 97 evm.model.tig00000350.35 no hits & (original description: no original description) 0.8172767097384639 95 evm.model.tig00001001.28 (p93411|ccnc_orysa : 145.0) G1/S-specific cyclin C-type - Oryza sativa (Rice) & (at5g48630 : 123.0) Cyclin family protein; FUNCTIONS IN: cyclin-dependent protein kinase activity; INVOLVED IN: regulation of cell cycle; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Transcription regulator cyclin (InterPro:IPR015429), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin family protein (TAIR:AT5G48640.1). & (reliability: 246.0) & (original description: no original description) 0.8168805011486702 97 evm.model.tig00000789.38 no hits & (original description: no original description) 0.815741804284496 98 evm.model.tig00000093.99 no hits & (original description: no original description) 0.8153196380161762 99 evm.model.tig00000144.65 no hits & (original description: no original description) 0.813374532480768 100