Sequence Description Alias PCC hrr evm.model.tig00000169.28 (at1g80930 : 587.0) MIF4G domain-containing protein / MA3 domain-containing protein; FUNCTIONS IN: RNA binding, binding; INVOLVED IN: translation, RNA metabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891), Armadillo-type fold (InterPro:IPR016024), MIF4G-like, type 3 (InterPro:IPR003890), MIF4-like, type 1/2/3 (InterPro:IPR016021); BEST Arabidopsis thaliana protein match is: Initiation factor eIF-4 gamma, MA3 (TAIR:AT1G52325.1); Has 51676 Blast hits to 28577 proteins in 1484 species: Archae - 86; Bacteria - 5039; Metazoa - 22313; Fungi - 6500; Plants - 3817; Viruses - 357; Other Eukaryotes - 13564 (source: NCBI BLink). & (reliability: 1174.0) & (original description: no original description) 0.8771149588901093 1 evm.model.tig00001278.4 no hits & (original description: no original description) 0.8564912138279822 3 evm.model.tig00000241.87 no hits & (original description: no original description) 0.8477458257229293 29 evm.model.tig00000865.56 no hits & (original description: no original description) 0.8450200208730138 4 evm.model.tig00001278.17 no hits & (original description: no original description) 0.8380900699184175 51 evm.model.tig00000737.31 (at1g09770 : 458.0) Member of MYB3R- and R2R3- type MYB- encoding genes. Essential for plant innate immunity. Interacts with MOS4 and PRL1.; cell division cycle 5 (CDC5); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: defense response signaling pathway, resistance gene-independent, defense response signaling pathway, resistance gene-dependent, defense response to bacterium, defense response to fungus, regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3351 (InterPro:IPR021786), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Myb transcription factor (InterPro:IPR015495), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb domain protein 3r-4 (TAIR:AT5G11510.1); Has 13137 Blast hits to 10813 proteins in 768 species: Archae - 14; Bacteria - 356; Metazoa - 3570; Fungi - 914; Plants - 4936; Viruses - 8; Other Eukaryotes - 3339 (source: NCBI BLink). & (reliability: 916.0) & (original description: no original description) 0.8338984281745362 52 evm.model.tig00021352.8 no hits & (original description: no original description) 0.8322315099370199 8 evm.model.tig00000093.30 no hits & (original description: no original description) 0.832008192707002 11 evm.model.tig00021612.22 no hits & (original description: no original description) 0.828940395378393 25 evm.model.tig00020961.69 (at5g08550 : 121.0) Encodes a transcriptional repressor that is homologous to the C-terminal region of mammalian GC binding factor. It regulates endoreduplication through control of CYC2A expression.; increased level of polyploidy1-1D (ILP1); CONTAINS InterPro DOMAIN/s: GC-rich sequence DNA-binding factor-like (InterPro:IPR012890); BEST Arabidopsis thaliana protein match is: GC-rich sequence DNA-binding factor-like protein (TAIR:AT5G09210.1); Has 786 Blast hits to 745 proteins in 186 species: Archae - 2; Bacteria - 46; Metazoa - 439; Fungi - 95; Plants - 69; Viruses - 1; Other Eukaryotes - 134 (source: NCBI BLink). & (reliability: 242.0) & (original description: no original description) 0.827289812309659 13 evm.model.tig00000144.121 (at5g58410 : 129.0) HEAT/U-box domain-containing protein; FUNCTIONS IN: binding, zinc ion binding; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Armadillo-type fold (InterPro:IPR016024); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 258.0) & (original description: no original description) 0.8210735318818694 27 evm.model.tig00000404.46 (at1g79280 : 204.0) Encodes a 237-kDA protein with similarity to vertebrate Tpr, a long coiled-coil proteins of nuclear pore inner basket filaments. It is localized to the inner surface of the nuclear envelope and is a component of the nuclear pore-associated steps of sumoylation and mRNA export in plants. Mutations affect flowering time regulation and other developmental processes. Probably acts in the same pathway as ESD4 in affecting flowering time, vegetative and inflorescence development.; nuclear pore anchor (NUA); CONTAINS InterPro DOMAIN/s: Tetratricopeptide, MLP1/MLP2-like (InterPro:IPR012929). & (reliability: 408.0) & (original description: no original description) 0.8183115631616817 24 evm.model.tig00021582.20 no hits & (original description: no original description) 0.8110027895175076 25 evm.model.tig00000944.12 no hits & (original description: no original description) 0.8097812311175828 19 evm.model.tig00001333.34 no hits & (original description: no original description) 0.8086672572988634 43 evm.model.tig00020572.38 no hits & (original description: no original description) 0.8086152217690611 70 evm.model.tig00001490.4 no hits & (original description: no original description) 0.8041680309881745 22 evm.model.tig00000057.42 no hits & (original description: no original description) 0.8031236054269894 23 evm.model.tig00000889.34 no hits & (original description: no original description) 0.8029547454421716 24 evm.model.tig00000881.31 no hits & (original description: no original description) 0.8024305737977692 36 evm.model.tig00000471.16 (at5g16780 : 81.3) Encodes a protein belonging to SART-1 family. The gene is expressed in the basal region of the developing embryo during heart stage. Phenotypic analyses of dot2 mutants suggest that this protein plays a role in root, shoot, and flower development. dot2 mutants are dwarved plants that display an aberrant spurred leaf venation pattern and fail to flower. In the roots DOT2 appears to be require for normal meristem organization and maintenance and the proper expression of PIN and PLT genes.; DEFECTIVELY ORGANIZED TRIBUTARIES 2 (DOT2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: in 9 processes; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SART-1 protein (InterPro:IPR005011); BEST Arabidopsis thaliana protein match is: SART-1 family (TAIR:AT3G14700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 162.6) & (original description: no original description) 0.7992631438034478 29 evm.model.tig00020704.44 no hits & (original description: no original description) 0.7984911472451265 28 evm.model.tig00021281.41 no hits & (original description: no original description) 0.794523051880184 32 evm.model.tig00000545.19 no hits & (original description: no original description) 0.7934581961357242 55 evm.model.tig00000342.16 no hits & (original description: no original description) 0.7932607561069949 34 evm.model.tig00020562.43 no hits & (original description: no original description) 0.7907747366558551 70 evm.model.tig00021122.10 (at2g37560 : 114.0) Origin Recognition Complex subunit 2. Involved in the initiation of DNA replication. Regulated transcriptionally during cell cycle, peaking at G1/S-phase. Target of E2F/DF family of transcription factors. Interacts strongly with all ORC subunits.; origin recognition complex second largest subunit 2 (ORC2); CONTAINS InterPro DOMAIN/s: Origin recognition complex, subunit 2 (InterPro:IPR007220); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 228.0) & (original description: no original description) 0.7853935733955162 60 evm.model.tig00001365.3 no hits & (original description: no original description) 0.7833815116808878 40 evm.model.tig00000396.42 no hits & (original description: no original description) 0.7782563219257277 42 evm.model.tig00021720.16 no hits & (original description: no original description) 0.7758707979109832 46 evm.model.tig00001029.35 no hits & (original description: no original description) 0.7746051196950214 89 evm.model.tig00001490.8 no hits & (original description: no original description) 0.7730229041359078 48 evm.model.tig00000383.62 no hits & (original description: no original description) 0.7711513915120225 51 evm.model.tig00020961.13 no hits & (original description: no original description) 0.7675499627718692 54 evm.model.tig00000882.28 no hits & (original description: no original description) 0.7652808993975383 60 evm.model.tig00001094.45 no hits & (original description: no original description) 0.7642998867573967 63 evm.model.tig00000852.9 (at3g61860 : 165.0) encodes an arginine/serine-rich splicing factor. transcript is alternatively spliced and is differentially expressed in different tissues (flowers, roots, stems, and leaves) examined.; RSP31; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome, RNA splicing; LOCATED IN: nuclear speck, spliceosomal complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G46610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 330.0) & (original description: no original description) 0.7578479948676042 67 evm.model.tig00020629.105 no hits & (original description: no original description) 0.75395870072774 81 evm.model.tig00000911.7 no hits & (original description: no original description) 0.751182108115944 75 evm.model.tig00001374.5 no hits & (original description: no original description) 0.7502889032067285 79 evm.model.tig00021238.19 no hits & (original description: no original description) 0.7495288202623528 81 evm.model.tig00000227.28 (at1g34220 : 96.7) Regulator of Vps4 activity in the MVB pathway protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF292, eukaryotic (InterPro:IPR005061); BEST Arabidopsis thaliana protein match is: Regulator of Vps4 activity in the MVB pathway protein (TAIR:AT4G35730.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 193.4) & (original description: no original description) 0.7488752995686689 84