Sequence Description Alias PCC hrr evm.model.tig00021534.7 no hits & (original description: no original description) 0.9412092232622844 8 evm.model.tig00020537.4 no hits & (original description: no original description) 0.9403239892086407 5 evm.model.tig00000498.31 (at5g17850 : 82.8) Sodium/calcium exchanger family protein; FUNCTIONS IN: cation:cation antiporter activity, calcium:sodium antiporter activity; INVOLVED IN: cation transport, transmembrane transport; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Sodium/calcium exchanger membrane region (InterPro:IPR004837); BEST Arabidopsis thaliana protein match is: calcium exchanger 7 (TAIR:AT5G17860.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 165.6) & (original description: no original description) 0.9393893216374128 6 evm.model.tig00021462.25 no hits & (original description: no original description) 0.9358594153681866 20 evm.model.tig00000821.28 no hits & (original description: no original description) 0.9356194959615581 20 evm.model.tig00001164.18 no hits & (original description: no original description) 0.93422514663906 57 evm.model.tig00021319.6 no hits & (original description: no original description) 0.9326180961972682 7 evm.model.tig00000042.69 no hits & (original description: no original description) 0.9321623151217238 27 evm.model.tig00001128.2 (at4g25350 : 168.0) SHB1 encodes a nuclear and cytosolic protein that has motifs homologous with SYG1 protein family members. Acts in cryptochrome signaling. Overexpression of SHB1 enhanced the expression of PHYTOCHROME-INTERACTING FACTOR4 (PIF4) under red light and promoted proteasome-mediated degradation of phytochrome A and hypocotyl elongation under far-red light. A knockout allele suppressed LONG HYPOCOTYL IN FAR-RED LIGHT1 (HFR1) expression and showed several deetiolation phenotypes. Acts upstream of HFR1. Regulates seed development.; SHORT HYPOCOTYL UNDER BLUE1 (SHB1); CONTAINS InterPro DOMAIN/s: EXS, C-terminal (InterPro:IPR004342), SPX, N-terminal (InterPro:IPR004331); BEST Arabidopsis thaliana protein match is: EXS (ERD1/XPR1/SYG1) family protein (TAIR:AT1G35350.1); Has 1169 Blast hits to 1111 proteins in 205 species: Archae - 2; Bacteria - 6; Metazoa - 265; Fungi - 425; Plants - 309; Viruses - 0; Other Eukaryotes - 162 (source: NCBI BLink). & (reliability: 336.0) & (original description: no original description) 0.9276501414166942 21 evm.model.tig00020563.17 no hits & (original description: no original description) 0.9254211464746194 10 evm.model.tig00000789.16 no hits & (original description: no original description) 0.9247993699439694 36 evm.model.tig00000310.58 no hits & (original description: no original description) 0.9231563607490317 12 evm.model.tig00020610.74 no hits & (original description: no original description) 0.9225200631034669 16 evm.model.tig00000189.40 no hits & (original description: no original description) 0.9215261199691428 31 evm.model.tig00021126.26 no hits & (original description: no original description) 0.921384686653888 18 evm.model.tig00001333.29 no hits & (original description: no original description) 0.92011779535514 27 evm.model.tig00021580.2 (at5g45380 : 340.0) DEGRADATION OF UREA 3 (DUR3); CONTAINS InterPro DOMAIN/s: Sodium/solute symporter, subgroup (InterPro:IPR019900), Sodium/solute symporter (InterPro:IPR001734); Has 9388 Blast hits to 9377 proteins in 1702 species: Archae - 173; Bacteria - 6389; Metazoa - 719; Fungi - 340; Plants - 51; Viruses - 0; Other Eukaryotes - 1716 (source: NCBI BLink). & (reliability: 680.0) & (original description: no original description) 0.9187331998693731 69 evm.model.tig00020554.159 no hits & (original description: no original description) 0.9182429726833591 64 evm.model.tig00021537.33 no hits & (original description: no original description) 0.9172298215209372 89 evm.model.tig00000900.35 (at1g51350 : 201.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid lumen; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); Has 1374 Blast hits to 1058 proteins in 203 species: Archae - 0; Bacteria - 0; Metazoa - 493; Fungi - 490; Plants - 280; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). & (reliability: 402.0) & (original description: no original description) 0.9169901332650168 20 evm.model.tig00000042.236 (at1g27320 : 119.0) Encodes a histidine kinases, a cytokinin receptor that controls cytokinin-mediated leaf longevity through a specific phosphorylation of the response regulator, ARR2.; histidine kinase 3 (HK3); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 2 (TAIR:AT5G35750.1); Has 124308 Blast hits to 110912 proteins in 3043 species: Archae - 772; Bacteria - 110408; Metazoa - 31; Fungi - 2185; Plants - 2022; Viruses - 28; Other Eukaryotes - 8862 (source: NCBI BLink). & (o48929|etr1_tobac : 94.0) Ethylene receptor (EC 2.7.13.3) (NT-ETR1) - Nicotiana tabacum (Common tobacco) & (reliability: 238.0) & (original description: no original description) 0.9152579499896755 30 evm.model.tig00020908.14 no hits & (original description: no original description) 0.9142699122196365 70 evm.model.tig00020629.137 no hits & (original description: no original description) 0.9137335943114858 24 evm.model.tig00021434.26 no hits & (original description: no original description) 0.9119831520215294 26 evm.model.tig00021522.8 no hits & (original description: no original description) 0.911376454387797 27 evm.model.tig00001021.9 no hits & (original description: no original description) 0.9105997548964825 34 evm.model.tig00020614.81 no hits & (original description: no original description) 0.9104532437672932 65 evm.model.tig00000823.16 (at4g31210 : 179.0) DNA topoisomerase, type IA, core; FUNCTIONS IN: DNA topoisomerase activity, DNA topoisomerase type I activity, DNA binding, nucleic acid binding; INVOLVED IN: DNA topological change, DNA unwinding involved in replication, DNA metabolic process; LOCATED IN: chromosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA topoisomerase, type IA, zn finger (InterPro:IPR013498), DNA topoisomerase, type IA, core (InterPro:IPR000380), DNA topoisomerase, type IA, DNA-binding (InterPro:IPR003602), DNA topoisomerase, type IA, domain 2 (InterPro:IPR003601), DNA topoisomerase, type IA, central (InterPro:IPR013497), DNA topoisomerase, type IA, central region, subdomain 3 (InterPro:IPR013826), DNA topoisomerase I, bacterial-type (InterPro:IPR005733), Toprim domain, subgroup (InterPro:IPR006154), DNA topoisomerase, type IA, central region, subdomain 1 (InterPro:IPR013824), Toprim domain (InterPro:IPR006171); BEST Arabidopsis thaliana protein match is: topoisomerase 3alpha (TAIR:AT5G63920.1); Has 21441 Blast hits to 18441 proteins in 2923 species: Archae - 440; Bacteria - 10015; Metazoa - 1777; Fungi - 750; Plants - 256; Viruses - 35; Other Eukaryotes - 8168 (source: NCBI BLink). & (reliability: 358.0) & (original description: no original description) 0.9101969147369676 100 evm.model.tig00000459.7 no hits & (original description: no original description) 0.909978449322755 31 evm.model.tig00020572.42 no hits & (original description: no original description) 0.909941705844969 53 evm.model.tig00001067.21 no hits & (original description: no original description) 0.9090711716083426 99 evm.model.tig00000523.8 no hits & (original description: no original description) 0.908848162738877 50 evm.model.tig00020614.33 (at1g60995 : 165.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Membralin (InterPro:IPR019144); Has 172 Blast hits to 170 proteins in 70 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (reliability: 330.0) & (original description: no original description) 0.9087445068130365 84 evm.model.tig00000523.7 no hits & (original description: no original description) 0.9083620558404539 54 evm.model.tig00000241.126 no hits & (original description: no original description) 0.9082896823280594 97 evm.model.tig00000403.88 no hits & (original description: no original description) 0.9076225989888478 42 evm.model.tig00000042.26 no hits & (original description: no original description) 0.9072918077232744 54 evm.model.tig00021428.6 no hits & (original description: no original description) 0.9062550392070715 70 evm.model.tig00020902.114 no hits & (original description: no original description) 0.9055768816203562 46 evm.model.tig00000093.6 (at1g66750 : 206.0) CDK-activating kinase 4 (CAK4); FUNCTIONS IN: protein binding, protein serine/threonine kinase activity, kinase activity; INVOLVED IN: regulation of cyclin-dependent protein kinase activity; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cyclin-dependent kinase D1;1 (TAIR:AT1G73690.1); Has 124001 Blast hits to 122583 proteins in 4490 species: Archae - 94; Bacteria - 13930; Metazoa - 46186; Fungi - 12564; Plants - 30685; Viruses - 410; Other Eukaryotes - 20132 (source: NCBI BLink). & (p29620|kc47_orysa : 200.0) CDC2+/CDC28-related protein kinase R2 (EC 2.7.11.22) - Oryza sativa (Rice) & (reliability: 412.0) & (original description: no original description) 0.9050642697309538 48 evm.model.tig00020560.34 no hits & (original description: no original description) 0.9040549191844965 49 evm.model.tig00000865.60 no hits & (original description: no original description) 0.9030628587546453 71 evm.model.tig00000829.29 no hits & (original description: no original description) 0.902401886838435 54 evm.model.tig00000215.22 (q6eu10|mta70_orysa : 369.0) Probable N6-adenosine-methyltransferase MT-A70-like (EC 2.1.1.62) - Oryza sativa (Rice) & (at4g10760 : 368.0) mRNAadenosine methylase (MTA); FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity; INVOLVED IN: embryo development ending in seed dormancy, mRNA methylation; LOCATED IN: nuclear speck, chloroplast; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MT-A70 (InterPro:IPR007757); BEST Arabidopsis thaliana protein match is: Methyltransferase MT-A70 family protein (TAIR:AT4G09980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 736.0) & (original description: no original description) 0.9021539208683061 98 evm.model.tig00020560.13 no hits & (original description: no original description) 0.9021019833096738 55 evm.model.tig00000254.91 no hits & (original description: no original description) 0.9019793786172827 56 evm.model.tig00021015.11 no hits & (original description: no original description) 0.9013610247862366 69 evm.model.tig00001042.24 no hits & (original description: no original description) 0.9013324480091703 60 evm.model.tig00020629.109 no hits & (original description: no original description) 0.9010540879902703 62 evm.model.tig00020660.23 (at4g10180 : 270.0) Encodes a nuclear-localized protein that acts as a repressor of photomorphogenesis and may be involved in chromatin remodeling.; DE-ETIOLATED 1 (DET1); FUNCTIONS IN: catalytic activity; INVOLVED IN: DNA repair, negative regulation of photomorphogenesis; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: De-etiolated protein 1, Det1 (InterPro:IPR019138), Six-hairpin glycosidase-like (InterPro:IPR008928); Has 248 Blast hits to 240 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 106; Fungi - 0; Plants - 132; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 540.0) & (original description: no original description) 0.9006428398261592 94 evm.model.tig00020693.7 (at2g31440 : 138.0) INVOLVED IN: positive regulation of catalytic activity, protein processing; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aph-1 (InterPro:IPR009294); Has 268 Blast hits to 262 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 212; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (reliability: 276.0) & (original description: no original description) 0.9004854034061013 66 evm.model.tig00000881.4 (at4g02690 : 112.0) Bax inhibitor-1 family protein; CONTAINS InterPro DOMAIN/s: Inhibitor of apoptosis-promoting Bax1 related (InterPro:IPR006214); BEST Arabidopsis thaliana protein match is: Bax inhibitor-1 family protein (TAIR:AT1G03070.2); Has 4713 Blast hits to 4713 proteins in 1352 species: Archae - 0; Bacteria - 2545; Metazoa - 840; Fungi - 138; Plants - 214; Viruses - 83; Other Eukaryotes - 893 (source: NCBI BLink). & (reliability: 224.0) & (original description: no original description) 0.899731646615745 70 evm.model.tig00000204.49 no hits & (original description: no original description) 0.8991679736712116 77 evm.model.tig00021489.17 (at1g09300 : 166.0) Metallopeptidase M24 family protein; FUNCTIONS IN: metallopeptidase activity, manganese ion binding, metalloexopeptidase activity, aminopeptidase activity; INVOLVED IN: proteolysis, cellular process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M24B, X-Pro dipeptidase/aminopeptidase P N-terminal (InterPro:IPR007865), Peptidase M24, structural domain (InterPro:IPR000994), Peptidase M24, methionine aminopeptidase (InterPro:IPR001714); BEST Arabidopsis thaliana protein match is: Metallopeptidase M24 family protein (TAIR:AT4G29490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 332.0) & (original description: no original description) 0.8984848903328503 75 evm.model.tig00020499.1 no hits & (original description: no original description) 0.8967870962108649 78 evm.model.tig00000754.6 no hits & (original description: no original description) 0.8953392573110543 79 evm.model.tig00000350.11 no hits & (original description: no original description) 0.8951372095219231 87 evm.model.tig00020571.23 no hits & (original description: no original description) 0.8945922395329883 83 evm.model.tig00021126.13 no hits & (original description: no original description) 0.8939734054539699 84 evm.model.tig00021489.7 no hits & (original description: no original description) 0.8937571117818172 86 evm.model.tig00021038.15 no hits & (original description: no original description) 0.893593148128079 87 evm.model.tig00000615.29 no hits & (original description: no original description) 0.893291850001353 90 evm.model.tig00000403.100 no hits & (original description: no original description) 0.8926253245222531 91 evm.model.tig00000198.4 no hits & (original description: no original description) 0.8925929762446984 92 evm.model.tig00020603.38 (at2g47900 : 117.0) Member of TLP family; tubby like protein 3 (TLP3); FUNCTIONS IN: phosphoric diester hydrolase activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Tubby, C-terminal (InterPro:IPR000007); BEST Arabidopsis thaliana protein match is: tubby-like protein 9 (TAIR:AT3G06380.1). & (reliability: 234.0) & (original description: no original description) 0.8921494195792462 94 evm.model.tig00000189.39 no hits & (original description: no original description) 0.8918198100144556 95