Sequence Description Alias PCC hrr evm.model.tig00000189.40 no hits & (original description: no original description) 0.9407668015918451 5 evm.model.tig00000042.26 no hits & (original description: no original description) 0.9256901431893029 13 evm.model.tig00000198.4 no hits & (original description: no original description) 0.9160178206352475 13 evm.model.tig00001128.2 (at4g25350 : 168.0) SHB1 encodes a nuclear and cytosolic protein that has motifs homologous with SYG1 protein family members. Acts in cryptochrome signaling. Overexpression of SHB1 enhanced the expression of PHYTOCHROME-INTERACTING FACTOR4 (PIF4) under red light and promoted proteasome-mediated degradation of phytochrome A and hypocotyl elongation under far-red light. A knockout allele suppressed LONG HYPOCOTYL IN FAR-RED LIGHT1 (HFR1) expression and showed several deetiolation phenotypes. Acts upstream of HFR1. Regulates seed development.; SHORT HYPOCOTYL UNDER BLUE1 (SHB1); CONTAINS InterPro DOMAIN/s: EXS, C-terminal (InterPro:IPR004342), SPX, N-terminal (InterPro:IPR004331); BEST Arabidopsis thaliana protein match is: EXS (ERD1/XPR1/SYG1) family protein (TAIR:AT1G35350.1); Has 1169 Blast hits to 1111 proteins in 205 species: Archae - 2; Bacteria - 6; Metazoa - 265; Fungi - 425; Plants - 309; Viruses - 0; Other Eukaryotes - 162 (source: NCBI BLink). & (reliability: 336.0) & (original description: no original description) 0.9155183661592432 45 evm.model.tig00020572.42 no hits & (original description: no original description) 0.9121148399053526 47 evm.model.tig00001477.3 no hits & (original description: no original description) 0.9094348508293376 19 evm.model.tig00020537.4 no hits & (original description: no original description) 0.9076144307122617 60 evm.model.tig00021127.70 (at5g39040 : 163.0) Encodes a member of TAP subfamily of ABC transporters that is located in the vacuole. Mutants are hypersensitive to aluminum and the gene product may be important for intracellular movement of some substrate, possibly chelated Al, as part of a mechanism of aluminum sequestration.; transporter associated with antigen processing protein 2 (TAP2); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: response to aluminum ion; LOCATED IN: vacuolar membrane, plasma membrane, vacuole, plant-type vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 11 (TAIR:AT1G02520.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q6yuu5|mdr_orysa : 150.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 326.0) & (original description: no original description) 0.9073733654037723 40 evm.model.tig00000331.3 no hits & (original description: no original description) 0.9069006812081355 9 evm.model.tig00000204.49 no hits & (original description: no original description) 0.9065558820427783 56 evm.model.tig00020557.24 no hits & (original description: no original description) 0.9061295239025349 56 evm.model.tig00000383.86 no hits & (original description: no original description) 0.9034912145925322 24 evm.model.tig00000194.87 no hits & (original description: no original description) 0.901328229379055 51 evm.model.tig00000900.35 (at1g51350 : 201.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid lumen; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); Has 1374 Blast hits to 1058 proteins in 203 species: Archae - 0; Bacteria - 0; Metazoa - 493; Fungi - 490; Plants - 280; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). & (reliability: 402.0) & (original description: no original description) 0.9005939483180171 59 evm.model.tig00000655.59 no hits & (original description: no original description) 0.8981970157358982 52 evm.model.tig00000241.189 (at2g39130 : 82.4) Transmembrane amino acid transporter family protein; FUNCTIONS IN: amino acid transmembrane transporter activity; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT3G54830.1); Has 5002 Blast hits to 4966 proteins in 291 species: Archae - 22; Bacteria - 61; Metazoa - 1689; Fungi - 998; Plants - 1489; Viruses - 3; Other Eukaryotes - 740 (source: NCBI BLink). & (reliability: 164.8) & (original description: no original description) 0.8947741715397705 54 evm.model.tig00001041.9 no hits & (original description: no original description) 0.8932111331090616 87 evm.model.tig00000042.38 no hits & (original description: no original description) 0.8927522518266379 20 evm.model.tig00000042.165 no hits & (original description: no original description) 0.8899835621613416 78 evm.model.tig00020538.27 no hits & (original description: no original description) 0.8877111872113126 25 evm.model.tig00000615.6 no hits & (original description: no original description) 0.8862008846055144 90 evm.model.tig00000133.41 no hits & (original description: no original description) 0.8859897915856711 66 evm.model.tig00020912.59 no hits & (original description: no original description) 0.8853817284064499 74 evm.model.tig00020610.122 no hits & (original description: no original description) 0.8831218130266504 32 evm.model.tig00001007.5 no hits & (original description: no original description) 0.8818240965916705 67 evm.model.tig00020710.72 no hits & (original description: no original description) 0.880549880230453 58 evm.model.tig00001253.6 no hits & (original description: no original description) 0.8804007406359321 96 evm.model.tig00020537.71 (at3g04680 : 250.0) Encodes a nuclear protein that functions in mRNA processing. Mutations in this gene cause embryo lethality and reduced transmission through the female gametophyte. Over-expression of a CLPS3:TAP protein changes the relative levels of two alternatively processed FCA transcripts. It also causes abnormal phyllotaxy and flower development, early flowering under long and short days, and increased levels of CUC1 and WUS expression.; CLP-similar protein 3 (CLPS3); CONTAINS InterPro DOMAIN/s: Pre-mRNA cleavage complex II Clp1 (InterPro:IPR010655); BEST Arabidopsis thaliana protein match is: CLP1-similar protein 5 (TAIR:AT5G39930.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 500.0) & (original description: no original description) 0.8781604764845666 98 evm.model.tig00021759.10 no hits & (original description: no original description) 0.8768535369335781 44 evm.model.tig00021098.29 (at1g08410 : 109.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: GTP binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP1/OBG (InterPro:IPR006073), GTP-binding protein, HSR1-related (InterPro:IPR002917); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G27200.1); Has 7267 Blast hits to 7158 proteins in 1932 species: Archae - 109; Bacteria - 4700; Metazoa - 622; Fungi - 502; Plants - 285; Viruses - 0; Other Eukaryotes - 1049 (source: NCBI BLink). & (reliability: 210.0) & (original description: no original description) 0.8761296225912475 57 evm.model.tig00020904.43 (at5g03730 : 142.0) Homologous to the RAF family of serine/threonine protein kinases. Negative regulator in the ethylene signal transduction pathway. Interacts with the putative ethylene receptors ETR1 and ERS. Constitutively expressed.; CONSTITUTIVE TRIPLE RESPONSE 1 (CTR1); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G24480.1); Has 126606 Blast hits to 124675 proteins in 4966 species: Archae - 112; Bacteria - 13843; Metazoa - 48138; Fungi - 11278; Plants - 33351; Viruses - 509; Other Eukaryotes - 19375 (source: NCBI BLink). & (o24585|cri4_maize : 88.6) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 284.0) & (original description: no original description) 0.8744866526560221 97 evm.model.tig00000169.35 (at3g20810 : 93.6) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G19840.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 187.2) & (original description: no original description) 0.8744347976148535 53 evm.model.tig00000093.6 (at1g66750 : 206.0) CDK-activating kinase 4 (CAK4); FUNCTIONS IN: protein binding, protein serine/threonine kinase activity, kinase activity; INVOLVED IN: regulation of cyclin-dependent protein kinase activity; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cyclin-dependent kinase D1;1 (TAIR:AT1G73690.1); Has 124001 Blast hits to 122583 proteins in 4490 species: Archae - 94; Bacteria - 13930; Metazoa - 46186; Fungi - 12564; Plants - 30685; Viruses - 410; Other Eukaryotes - 20132 (source: NCBI BLink). & (p29620|kc47_orysa : 200.0) CDC2+/CDC28-related protein kinase R2 (EC 2.7.11.22) - Oryza sativa (Rice) & (reliability: 412.0) & (original description: no original description) 0.8742596266737871 54 evm.model.tig00020999.5 no hits & (original description: no original description) 0.8737144525222577 98 evm.model.tig00001215.3 no hits & (original description: no original description) 0.8717052797149156 94 evm.model.tig00020952.45 no hits & (original description: no original description) 0.8715485082112443 67 evm.model.tig00021179.25 no hits & (original description: no original description) 0.868172232028426 74 evm.model.tig00000140.3 no hits & (original description: no original description) 0.8671277299106106 78 evm.model.tig00021244.34 no hits & (original description: no original description) 0.865635734977785 84 evm.model.tig00000989.14 no hits & (original description: no original description) 0.8617955312456436 96 evm.model.tig00000056.24 no hits & (original description: no original description) 0.86177963241257 97