Sequence Description Alias PCC hrr evm.model.tig00001376.23 (at4g01040 : 83.6) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, chitinase activity, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 18, catalytic domain (InterPro:IPR001223), Chitinase II (InterPro:IPR011583), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); Has 828 Blast hits to 823 proteins in 284 species: Archae - 0; Bacteria - 578; Metazoa - 178; Fungi - 2; Plants - 34; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). & (reliability: 167.2) & (original description: no original description) 0.9109844530062047 1 evm.model.tig00000219.75 no hits & (original description: no original description) 0.9034104244953534 9 evm.model.tig00001038.27 (at3g13290 : 87.8) varicose-related (VCR); FUNCTIONS IN: nucleotide binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G13300.1); Has 1082 Blast hits to 861 proteins in 259 species: Archae - 6; Bacteria - 246; Metazoa - 313; Fungi - 205; Plants - 136; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink). & (reliability: 175.6) & (original description: no original description) 0.902148251269907 32 evm.model.tig00021181.7 no hits & (original description: no original description) 0.9001468970505879 4 evm.model.tig00000615.40 no hits & (original description: no original description) 0.9001065098986641 21 evm.model.tig00000754.9 no hits & (original description: no original description) 0.8973812478828218 14 evm.model.tig00020629.84 (at1g56500 : 87.8) haloacid dehalogenase-like hydrolase family protein; FUNCTIONS IN: hydrolase activity, oxidoreductase activity, catalytic activity; INVOLVED IN: metabolic process, cell redox homeostasis; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehydrogenase/epoxide hydrolase (InterPro:IPR005833), Low-density lipoprotein receptor, class B (YWTD) repeat (InterPro:IPR000033), Thioredoxin fold (InterPro:IPR012335), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), Thioredoxin-like (InterPro:IPR017936), NHL repeat (InterPro:IPR001258), Thioredoxin-like fold (InterPro:IPR012336), Redoxin (InterPro:IPR013740), HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:AT3G07060.1); Has 23445 Blast hits to 20574 proteins in 2565 species: Archae - 340; Bacteria - 17044; Metazoa - 1036; Fungi - 332; Plants - 721; Viruses - 3; Other Eukaryotes - 3969 (source: NCBI BLink). & (reliability: 175.6) & (original description: no original description) 0.8966610866882491 46 evm.model.tig00001254.9 no hits & (original description: no original description) 0.896529006839483 47 evm.model.tig00001224.12 no hits & (original description: no original description) 0.8926475203853561 25 evm.model.tig00000093.130 no hits & (original description: no original description) 0.8880591497658838 16 evm.model.tig00001302.2 no hits & (original description: no original description) 0.8877663447754407 16 evm.model.tig00020934.32 no hits & (original description: no original description) 0.886063298487997 49 evm.model.tig00000940.6 no hits & (original description: no original description) 0.8848058638948473 66 evm.model.tig00020930.5 no hits & (original description: no original description) 0.8842574742043812 14 evm.model.tig00021617.17 no hits & (original description: no original description) 0.8840379052779243 34 evm.model.tig00021276.11 (at1g73990 : 144.0) Encodes a putative protease SppA (SppA).; signal peptide peptidase (SPPA); FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: proteolysis, response to light intensity; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S49, protease IV (InterPro:IPR004634), Peptidase S49 (InterPro:IPR002142), Peptidase S49, SppA (InterPro:IPR004635); Has 9340 Blast hits to 7649 proteins in 1706 species: Archae - 204; Bacteria - 6183; Metazoa - 9; Fungi - 4; Plants - 52; Viruses - 43; Other Eukaryotes - 2845 (source: NCBI BLink). & (reliability: 288.0) & (original description: no original description) 0.8833699972980444 39 evm.model.tig00021244.28 no hits & (original description: no original description) 0.8825459299791777 59 evm.model.tig00021318.26 no hits & (original description: no original description) 0.8824737560257991 22 evm.model.tig00001376.10 no hits & (original description: no original description) 0.8800270381396171 68 evm.model.tig00000900.15 (at3g04240 : 108.0) Has O-linked N-acetyl glucosamine transferase activity. Similar to Arabidopsis SPY gene.; secret agent (SEC); CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G11540.1); Has 114710 Blast hits to 35863 proteins in 2480 species: Archae - 3197; Bacteria - 54774; Metazoa - 16661; Fungi - 4580; Plants - 3873; Viruses - 0; Other Eukaryotes - 31625 (source: NCBI BLink). & (reliability: 216.0) & (original description: no original description) 0.8748598724892928 95 evm.model.tig00020943.40 no hits & (original description: no original description) 0.8734492254502226 69 evm.model.tig00000692.40 no hits & (original description: no original description) 0.8727725280211783 22 evm.model.tig00000402.15 no hits & (original description: no original description) 0.8711178080561625 59 evm.model.tig00000241.164 no hits & (original description: no original description) 0.8697136943281442 85 evm.model.tig00000655.10 no hits & (original description: no original description) 0.8685468402192202 25 evm.model.tig00000480.43 (at3g24590 : 83.6) Encodes a signal peptidase Plsp1 (plastidic type I signal peptidase 1). Required for thylakoid development. Functions in the maturation of the 75-kD component of the translocon at the outer envelope membrane of chloroplasts and oxygen evolving complex subunit 33 (OE33).; plastidic type i signal peptidase 1 (PLSP1); FUNCTIONS IN: peptidase activity; INVOLVED IN: proteolysis, thylakoid membrane organization, protein maturation; LOCATED IN: chloroplast thylakoid membrane, chloroplast, membrane, plastid envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S24/S26A/S26B/S26C, beta-ribbon domain (InterPro:IPR011056), Peptidase S24/S26A/S26B/S26C (InterPro:IPR015927), Peptidase S26A, signal peptidase I, conserved site (InterPro:IPR019758), Peptidase S26, conserved region (InterPro:IPR019533), Peptidase S26A, signal peptidase I (InterPro:IPR000223), Peptidase S26A, signal peptidase I, serine active site (InterPro:IPR019756); BEST Arabidopsis thaliana protein match is: Peptidase S24/S26A/S26B/S26C family protein (TAIR:AT1G06870.1); Has 9773 Blast hits to 9438 proteins in 2404 species: Archae - 0; Bacteria - 7280; Metazoa - 206; Fungi - 105; Plants - 230; Viruses - 0; Other Eukaryotes - 1952 (source: NCBI BLink). & (reliability: 167.2) & (original description: no original description) 0.8645430218689402 27 evm.model.tig00001604.6 no hits & (original description: no original description) 0.8620499245762729 28 evm.model.tig00001374.13 (at5g14250 : 95.1) Encodes subunit 3 of the COP9 signalosome.; CONSTITUTIVE PHOTOMORPHOGENIC 13 (COP13); CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717); Has 402 Blast hits to 401 proteins in 151 species: Archae - 0; Bacteria - 0; Metazoa - 218; Fungi - 81; Plants - 54; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (reliability: 190.2) & (original description: no original description) 0.8617807399631727 71 evm.model.tig00001484.1 no hits & (original description: no original description) 0.8617774643237625 57 evm.model.tig00000889.14 (at3g11240 : 197.0) Encodes an arginyl-tRNA:protein arginyltransferase (ATE2), a component of the N-end rule pathway that targets protein degradation through the identity of the amino-terminal residue of specific protein substrates. Arabidopsis contains two ATE genes: At5g05700/ATE1, At3g11240/ATE2. Another component of the N-end rule pathway is At5g02310/PROTEOLYSIS6 (PRT6). PRT6 and ATE were shown to regulate seed after-ripening, seedling sugar sensitivity, seedling lipid breakdown, and abscisic acid (ABA) sensitivity of germination.; arginine-tRNA protein transferase 2 (ATE2); FUNCTIONS IN: arginyltransferase activity; INVOLVED IN: regulation of seed germination, regulation of lipid catabolic process, protein arginylation, response to abscisic acid stimulus; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Arginine-tRNA-protein transferase, N-terminal (InterPro:IPR007471), Arginine-tRNA-protein transferase 1, eukaryotic (InterPro:IPR017137), Arginine-tRNA-protein transferase, C-terminal (InterPro:IPR007472); BEST Arabidopsis thaliana protein match is: arginine-tRNA protein transferase 1 (TAIR:AT5G05700.1); Has 2270 Blast hits to 2031 proteins in 783 species: Archae - 0; Bacteria - 1438; Metazoa - 213; Fungi - 241; Plants - 48; Viruses - 0; Other Eukaryotes - 330 (source: NCBI BLink). & (reliability: 394.0) & (original description: no original description) 0.8600736775830969 49 evm.model.tig00000079.3 no hits & (original description: no original description) 0.8598841390990901 65 evm.model.tig00000498.54 no hits & (original description: no original description) 0.8582562353714535 34 evm.model.tig00020912.61 no hits & (original description: no original description) 0.8569137484773675 68 evm.model.tig00021122.7 no hits & (original description: no original description) 0.8554503365501263 38 evm.model.tig00020943.75 no hits & (original description: no original description) 0.8547006843795676 83 evm.model.tig00000769.27 no hits & (original description: no original description) 0.8535321399106677 40 evm.model.tig00021037.44 no hits & (original description: no original description) 0.8530341821348028 41 evm.model.tig00000857.18 no hits & (original description: no original description) 0.8525197651439482 42 evm.model.tig00001086.11 no hits & (original description: no original description) 0.8512406453153198 95 evm.model.tig00020961.64 no hits & (original description: no original description) 0.8511257440842785 45 evm.model.tig00020951.34 no hits & (original description: no original description) 0.8504896029801488 67 evm.model.tig00001024.19 no hits & (original description: no original description) 0.8480689806573247 50 evm.model.tig00001127.11 no hits & (original description: no original description) 0.8471512186019442 51 evm.model.tig00021127.18 no hits & (original description: no original description) 0.8443357661185423 55 evm.model.tig00021682.13 no hits & (original description: no original description) 0.8431634586577339 56 evm.model.tig00021795.6 no hits & (original description: no original description) 0.8399583362168243 68 evm.model.tig00001052.8 no hits & (original description: no original description) 0.839655665403779 62 evm.model.tig00021612.42 no hits & (original description: no original description) 0.8392998735457925 94 evm.model.tig00001154.4 (at3g63460 : 140.0) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G18830.1). & (reliability: 280.0) & (original description: no original description) 0.8380368362252346 67 evm.model.tig00000403.4 no hits & (original description: no original description) 0.835822153526723 69 evm.model.tig00020563.157 no hits & (original description: no original description) 0.8343837582904706 71 evm.model.tig00000093.226 no hits & (original description: no original description) 0.8342257505589079 72 evm.model.tig00001024.33 no hits & (original description: no original description) 0.8340491440845929 73 evm.model.tig00000383.53 no hits & (original description: no original description) 0.8335394602751454 75 evm.model.tig00000057.96 no hits & (original description: no original description) 0.8328526207066128 77 evm.model.tig00021127.7 no hits & (original description: no original description) 0.8290492950119994 90 evm.model.tig00000870.3 no hits & (original description: no original description) 0.828362333688064 87 evm.model.tig00000025.5 (at1g02410 : 124.0) cytochrome c oxidase assembly protein CtaG / Cox11 family; FUNCTIONS IN: copper ion binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase assembly protein CtaG/Cox11 (InterPro:IPR007533); Has 2749 Blast hits to 2749 proteins in 659 species: Archae - 0; Bacteria - 997; Metazoa - 98; Fungi - 130; Plants - 41; Viruses - 0; Other Eukaryotes - 1483 (source: NCBI BLink). & (reliability: 248.0) & (original description: no original description) 0.8282768055658226 88 evm.model.tig00000980.21 (at5g63280 : 90.5) C2H2-like zinc finger protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger (C2H2 type) family protein (TAIR:AT5G40710.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 164.8) & (original description: no original description) 0.8269987848786441 95 evm.model.tig00020554.99 (at3g07950 : 169.0) rhomboid protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1751, integral membrane, eukaryotic (InterPro:IPR013861); Has 573 Blast hits to 573 proteins in 252 species: Archae - 14; Bacteria - 156; Metazoa - 119; Fungi - 151; Plants - 78; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink). & (reliability: 338.0) & (original description: no original description) 0.8269591362552721 93 evm.model.tig00021623.14 no hits & (original description: no original description) 0.8265057667696827 95 evm.model.tig00000865.49 no hits & (original description: no original description) 0.8258285106997884 97 evm.model.tig00021719.11 no hits & (original description: no original description) 0.8257480925965938 98