Sequence Description Alias PCC hrr evm.model.tig00000553.28 (at3g18790 : 177.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Isy1-like splicing (InterPro:IPR009360); Has 1147 Blast hits to 965 proteins in 236 species: Archae - 12; Bacteria - 13; Metazoa - 351; Fungi - 230; Plants - 49; Viruses - 9; Other Eukaryotes - 483 (source: NCBI BLink). & (reliability: 354.0) & (original description: no original description) 0.9234558753423194 1 evm.model.tig00020952.50 no hits & (original description: no original description) 0.9131216612451146 6 evm.model.tig00000849.22 no hits & (original description: no original description) 0.8924075328794044 11 evm.model.tig00001424.12 (at1g02330 : 89.4) CONTAINS InterPro DOMAIN/s: Hepatocellular carcinoma-associated antigen 59 (InterPro:IPR010756); Has 1239 Blast hits to 998 proteins in 204 species: Archae - 4; Bacteria - 71; Metazoa - 421; Fungi - 109; Plants - 87; Viruses - 5; Other Eukaryotes - 542 (source: NCBI BLink). & (reliability: 178.8) & (original description: no original description) 0.8895612599328376 8 evm.model.tig00000718.4 (at1g73110 : 198.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATPase activity, ATP binding; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959); BEST Arabidopsis thaliana protein match is: rubisco activase (TAIR:AT2G39730.1); Has 469 Blast hits to 469 proteins in 170 species: Archae - 27; Bacteria - 71; Metazoa - 17; Fungi - 60; Plants - 256; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (o64981|rca_phavu : 187.0) Ribulose bisphosphate carboxylase/oxygenase activase, chloroplast precursor (RuBisCO activase) (RA) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 396.0) & (original description: no original description) 0.8883258170846183 10 evm.model.tig00000553.43 no hits & (original description: no original description) 0.8880087295864322 42 evm.model.tig00020685.34 no hits & (original description: no original description) 0.8826302649690246 18 evm.model.tig00000382.36 no hits & (original description: no original description) 0.8743730688430604 33 evm.model.tig00000350.55 no hits & (original description: no original description) 0.8732037666828489 9 evm.model.tig00000342.36 no hits & (original description: no original description) 0.8726998297359261 23 evm.model.tig00000135.2 (at2g45990 : 133.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 266.0) & (original description: no original description) 0.8664443887476824 30 evm.model.tig00020918.2 (at5g61150 : 95.5) Encodes highly hydrophilic protein involved in positively regulating FLC expression. Mutants are early flowering and show a loss of FLC expression in the absence of cold.; VERNALIZATION INDEPENDENCE 4 (VIP4); INVOLVED IN: negative regulation of flower development, vernalization response; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leo1-like protein (InterPro:IPR007149); Has 69096 Blast hits to 31991 proteins in 1682 species: Archae - 184; Bacteria - 8816; Metazoa - 27909; Fungi - 8257; Plants - 3470; Viruses - 882; Other Eukaryotes - 19578 (source: NCBI BLink). & (reliability: 191.0) & (original description: no original description) 0.8630902415600042 12 evm.model.tig00020554.74 no hits & (original description: no original description) 0.8604400188238776 45 evm.model.tig00021348.65 (at4g26570 : 153.0) member of AtCBLs (Calcineurin B-like Calcium Sensor Proteins); calcineurin B-like 3 (CBL3); FUNCTIONS IN: calcium ion binding; INVOLVED IN: detection of calcium ion; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Recoverin (InterPro:IPR001125), EF-HAND 2 (InterPro:IPR018249), Calcineurin B protein (InterPro:IPR015757), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: calcineurin B-like protein 2 (TAIR:AT5G55990.1); Has 7988 Blast hits to 7953 proteins in 833 species: Archae - 0; Bacteria - 10; Metazoa - 3891; Fungi - 1253; Plants - 1902; Viruses - 0; Other Eukaryotes - 932 (source: NCBI BLink). & (reliability: 306.0) & (original description: no original description) 0.8582329151479432 22 evm.model.tig00020554.17 no hits & (original description: no original description) 0.8579894503496719 59 evm.model.tig00020629.148 no hits & (original description: no original description) 0.8571492879071375 31 evm.model.tig00020927.62 no hits & (original description: no original description) 0.8568919998847834 93 evm.model.tig00000480.70 no hits & (original description: no original description) 0.8526846836454302 25 evm.model.tig00000912.35 no hits & (original description: no original description) 0.8522457820981952 19 evm.model.tig00000989.28 no hits & (original description: no original description) 0.8500666210516341 29 evm.model.tig00021234.35 no hits & (original description: no original description) 0.8491748546736144 41 evm.model.tig00000076.3 no hits & (original description: no original description) 0.8477129544774091 41 evm.model.tig00020848.18 (at1g28560 : 108.0) Encodes a protein similar to human SNAP50. Mutants display different temperature sensitivities in the dedifferentiation of cells from different organs. Mutation inhibits the dedifferentiation-associated accumulation of U-snRNAs and some other small RNA species encoded by independent-type genes carrying the USE and TATA box. Required for the elevation of cell proliferation competence in hypocotyl dedifferentiation.; SHOOT REDIFFERENTIATION DEFECTIVE 2 (SRD2); FUNCTIONS IN: DNA binding; INVOLVED IN: snRNA transcription, organ morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: snRNA-activating protein complex, subunit 3, C-terminal (InterPro:IPR022042); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 216.0) & (original description: no original description) 0.8462981496264993 25 evm.model.tig00020610.98 no hits & (original description: no original description) 0.8432649254389708 42 evm.model.tig00000025.51 no hits & (original description: no original description) 0.8423607389554715 89 evm.model.tig00000829.2 no hits & (original description: no original description) 0.842129601891449 28 evm.model.tig00020918.1 (at5g37290 : 82.4) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 164.8) & (original description: no original description) 0.8375880276114044 29 evm.model.tig00020553.174 no hits & (original description: no original description) 0.8367173385373121 78 evm.model.tig00000342.25 no hits & (original description: no original description) 0.8323201243941337 37 evm.model.tig00000350.12 no hits & (original description: no original description) 0.8320539910468017 32 evm.model.tig00000444.10 no hits & (original description: no original description) 0.8313705874832658 35 evm.model.tig00000076.151 (at4g38260 : 128.0) Protein of unknown function (DUF833); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF833 (InterPro:IPR008551); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF833) (TAIR:AT1G20680.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 256.0) & (original description: no original description) 0.8300213186762108 89 evm.model.tig00000525.3 no hits & (original description: no original description) 0.8298282891050949 35 evm.model.tig00022075.37 no hits & (original description: no original description) 0.8267196104608548 82 evm.model.tig00000449.5 no hits & (original description: no original description) 0.8263735984349231 77 evm.model.tig00001181.12 no hits & (original description: no original description) 0.8240464313706795 43 evm.model.tig00021435.5 no hits & (original description: no original description) 0.8193231994193714 40 evm.model.tig00020848.24 no hits & (original description: no original description) 0.8153433648581084 43 evm.model.tig00000981.1 no hits & (original description: no original description) 0.8127412870372437 55 evm.model.tig00021181.3 no hits & (original description: no original description) 0.8107502819194259 46 evm.model.tig00020909.40 (at2g44050 : 94.7) 6,7-dimethyl-8-ribityllumazine synthase / DMRL synthase / lumazine synthase / riboflavin synthase [Arabidopsis thaliana]. Acts in the jasmonic acid signaling pathway.; COI1 SUPPRESSOR1 (COS1); FUNCTIONS IN: 6,7-dimethyl-8-ribityllumazine synthase activity; INVOLVED IN: riboflavin biosynthetic process, jasmonic acid mediated signaling pathway; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 6,7-dimethyl-8-ribityllumazine synthase (InterPro:IPR002180), 6,7-dimethyl-8-ribityllumazine synthase, chloroplast (InterPro:IPR017420); Has 7351 Blast hits to 7351 proteins in 2325 species: Archae - 190; Bacteria - 4938; Metazoa - 2; Fungi - 209; Plants - 81; Viruses - 0; Other Eukaryotes - 1931 (source: NCBI BLink). & (q9xh32|risb_spiol : 92.4) 6,7-dimethyl-8-ribityllumazine synthase, chloroplast precursor (EC 2.5.1.9) (DMRL synthase) (Lumazine synthase) - Spinacia oleracea (Spinach) & (reliability: 189.4) & (original description: no original description) 0.8084709210270057 49 evm.model.tig00020911.48 no hits & (original description: no original description) 0.805712457691931 69 evm.model.tig00020553.280 (at4g27745 : 145.0) Yippee family putative zinc-binding protein; CONTAINS InterPro DOMAIN/s: Yippee-like protein (InterPro:IPR004910); BEST Arabidopsis thaliana protein match is: Yippee family putative zinc-binding protein (TAIR:AT5G53940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8s5m8|yipl_orysa : 142.0) Putative yippee-like protein Os10g0369500 - Oryza sativa (Rice) & (reliability: 268.0) & (original description: no original description) 0.800258450440805 61 evm.model.tig00001001.27 no hits & (original description: no original description) 0.8001385513518583 62 evm.model.tig00000704.18 no hits & (original description: no original description) 0.7968408714542896 65 evm.model.tig00021348.24 no hits & (original description: no original description) 0.7949034042935605 67 evm.model.tig00000711.56 no hits & (original description: no original description) 0.7938022769559354 68 evm.model.tig00021352.50 (at3g28430 : 152.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function FPL (InterPro:IPR019155); Has 243 Blast hits to 233 proteins in 101 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 304.0) & (original description: no original description) 0.7929454932948931 69 evm.model.tig00000741.23 no hits & (original description: no original description) 0.7910705268868903 72 evm.model.tig00000498.99 (at2g37840 : 216.0) Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, putative (InterPro:IPR020655), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G53930.2); Has 51534 Blast hits to 51036 proteins in 1321 species: Archae - 36; Bacteria - 3205; Metazoa - 22459; Fungi - 6825; Plants - 7556; Viruses - 105; Other Eukaryotes - 11348 (source: NCBI BLink). & (q02723|rkin1_secce : 128.0) Carbon catabolite derepressing protein kinase (EC 2.7.11.1) - Secale cereale (Rye) & (reliability: 432.0) & (original description: no original description) 0.7910081850333652 71 evm.model.tig00020704.77 no hits & (original description: no original description) 0.790167001460086 72 evm.model.tig00001264.16 (at5g58020 : 125.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF602 (InterPro:IPR006735); Has 385 Blast hits to 385 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 153; Fungi - 117; Plants - 50; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (reliability: 250.0) & (original description: no original description) 0.786533393861726 76 evm.model.tig00000144.163 no hits & (original description: no original description) 0.7851367877126696 78 evm.model.tig00000178.24 no hits & (original description: no original description) 0.78289676845693 81 evm.model.tig00001264.19 no hits & (original description: no original description) 0.7827141973937228 83 evm.model.tig00000093.85 (p16868|h2b4_volca : 140.0) Histone H2B.4 (H2B-IV) - Volvox carteri & (at5g59910 : 135.0) HTB4; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G45980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 268.0) & (original description: no original description) 0.7817784376428971 84 evm.model.tig00000448.27 no hits & (original description: no original description) 0.7800678582129454 86 evm.model.tig00000970.18 no hits & (original description: no original description) 0.7799620470169509 88 evm.model.tig00001415.14 (at1g25260 : 114.0) Ribosomal protein L10 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic ribosome, ribosome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L10 (InterPro:IPR001790); BEST Arabidopsis thaliana protein match is: Ribosomal protein L10 family protein (TAIR:AT3G11250.1); Has 1099 Blast hits to 1097 proteins in 339 species: Archae - 116; Bacteria - 0; Metazoa - 360; Fungi - 259; Plants - 172; Viruses - 0; Other Eukaryotes - 192 (source: NCBI BLink). & (reliability: 228.0) & (original description: no original description) 0.7793791666411263 90 evm.model.tig00001000.15 no hits & (original description: no original description) 0.7793457834412787 91 evm.model.tig00021464.14 no hits & (original description: no original description) 0.7758068517685356 99