Sequence Description Alias PCC hrr evm.model.tig00000248.40 (at5g25150 : 97.1) Encodes a putative TATA-binding-protein associated factor TAF5. TAFs are subunits of the general transcription factor IID (TFIID).; TBP-associated factor 5 (TAF5); FUNCTIONS IN: transcription regulator activity, nucleotide binding; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: guard cell, root, inflorescence, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781), TFIID subunit, WD40-associated region (InterPro:IPR007582); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 114463 Blast hits to 42274 proteins in 991 species: Archae - 68; Bacteria - 11258; Metazoa - 46869; Fungi - 25620; Plants - 15010; Viruses - 3; Other Eukaryotes - 15635 (source: NCBI BLink). & (q39336|gblp_brana : 87.8) Guanine nucleotide-binding protein subunit beta-like protein - Brassica napus (Rape) & (reliability: 194.2) & (original description: no original description) 0.9636392643716882 1 evm.model.tig00000545.38 no hits & (original description: no original description) 0.9612453361258989 2 evm.model.tig00020912.96 no hits & (original description: no original description) 0.9536409711288417 6 evm.model.tig00020660.27 no hits & (original description: no original description) 0.950812693982658 5 evm.model.tig00000459.12 no hits & (original description: no original description) 0.9428889629194099 11 evm.model.tig00000113.43 no hits & (original description: no original description) 0.942706075588853 6 evm.model.tig00000498.35 no hits & (original description: no original description) 0.9423498913150525 7 evm.model.tig00001085.24 (at5g15540 : 111.0) Encodes Adherin SCC2. Essential for viability. Required for normal seed development. Plays a role in the establishment of sister-chromatid cohesion and chromosome organization during meiosis.; EMBRYO DEFECTIVE 2773 (EMB2773); FUNCTIONS IN: binding, zinc ion binding; INVOLVED IN: centromere complex assembly, sister chromatid cohesion, embryo development ending in seed dormancy, meiotic sister chromatid cohesion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Armadillo-type fold (InterPro:IPR016024), Zinc finger, PHD-finger (InterPro:IPR019787). & (reliability: 222.0) & (original description: no original description) 0.9411675120326602 8 evm.model.tig00020685.5 no hits & (original description: no original description) 0.9395366670003766 9 evm.model.tig00000402.2 no hits & (original description: no original description) 0.9394988513612271 10 evm.model.tig00021517.3 no hits & (original description: no original description) 0.9393705779948178 11 evm.model.tig00000743.31 no hits & (original description: no original description) 0.9348940911398738 12 evm.model.tig00000157.46 no hits & (original description: no original description) 0.934818760445446 13 evm.model.tig00001065.18 no hits & (original description: no original description) 0.933413880645788 45 evm.model.tig00000367.50 no hits & (original description: no original description) 0.9318590019079007 15 evm.model.tig00020554.81 no hits & (original description: no original description) 0.9312056614043352 23 evm.model.tig00020684.1 no hits & (original description: no original description) 0.9311583897413835 32 evm.model.tig00021440.8 (at1g48090 : 103.0) calcium-dependent lipid-binding family protein; FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), Protein of unknown function DUF946 (InterPro:IPR009291), Vacuolar protein sorting-associated protein (InterPro:IPR009543), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973); BEST Arabidopsis thaliana protein match is: pleckstrin homology (PH) domain-containing protein (TAIR:AT4G17140.2); Has 2732 Blast hits to 1481 proteins in 212 species: Archae - 2; Bacteria - 15; Metazoa - 1181; Fungi - 466; Plants - 461; Viruses - 0; Other Eukaryotes - 607 (source: NCBI BLink). & (reliability: 206.0) & (original description: no original description) 0.930693058441699 53 evm.model.tig00000144.107 no hits & (original description: no original description) 0.9306728146907312 36 evm.model.tig00000254.31 no hits & (original description: no original description) 0.9296055887730034 20 evm.model.tig00000241.110 no hits & (original description: no original description) 0.9272152913187532 21 evm.model.tig00000788.2 no hits & (original description: no original description) 0.9261112398204907 22 evm.model.tig00000144.94 (at5g12350 : 97.1) Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain; FUNCTIONS IN: chromatin binding, zinc ion binding, Ran GTPase binding; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation, RCC1 (InterPro:IPR000408), Disease resistance/zinc finger/chromosome condensation-like region (InterPro:IPR013591), Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Zinc finger, FYVE-type (InterPro:IPR000306), Zinc finger, FYVE-related (InterPro:IPR017455), Pleckstrin homology-type (InterPro:IPR011993), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain (TAIR:AT5G19420.1); Has 23773 Blast hits to 8858 proteins in 456 species: Archae - 73; Bacteria - 2346; Metazoa - 9625; Fungi - 1299; Plants - 3027; Viruses - 3; Other Eukaryotes - 7400 (source: NCBI BLink). & (reliability: 189.4) & (original description: no original description) 0.9259615908260235 36 evm.model.tig00021721.15 no hits & (original description: no original description) 0.9258122058608864 39 evm.model.tig00021293.27 no hits & (original description: no original description) 0.9247430498847208 26 evm.model.tig00000042.125 (at4g00450 : 87.8) Encodes the Arabidopsis homolog of the transcriptional regulator MED12, is dynamically expressed during embryogenesis and regulates both developmental timing and the radial pattern formation. Involved in flowering time. The mutant enhances the expression of the flowering time (FT) gene. A knockout mutant of this gene showed late-flowering phenotype.; CENTER CITY (CCT); FUNCTIONS IN: RNA polymerase II transcription mediator activity; INVOLVED IN: photoperiodism, flowering, regulation of development, heterochronic, regulation of radial pattern formation; LOCATED IN: mediator complex, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex, subunit Med12 (InterPro:IPR019035); Has 216 Blast hits to 184 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 42; Fungi - 65; Plants - 86; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (reliability: 175.6) & (original description: no original description) 0.92472866761599 40 evm.model.tig00001368.6 no hits & (original description: no original description) 0.9242383261568389 33 evm.model.tig00000624.16 no hits & (original description: no original description) 0.9238353657233825 28 evm.model.tig00020563.65 no hits & (original description: no original description) 0.9228049989400007 29 evm.model.tig00021013.33 no hits & (original description: no original description) 0.9226407672558118 46 evm.model.tig00001604.3 no hits & (original description: no original description) 0.9224346496380189 59 evm.model.tig00000241.60 no hits & (original description: no original description) 0.921644067263081 46 evm.model.tig00021013.42 no hits & (original description: no original description) 0.9212897564756657 33 evm.model.tig00020684.8 no hits & (original description: no original description) 0.9204060849114768 34 evm.model.tig00000113.11 no hits & (original description: no original description) 0.919853003177833 45 evm.model.tig00000093.200 no hits & (original description: no original description) 0.9196852904625916 56 evm.model.tig00000478.26 no hits & (original description: no original description) 0.9187086429405749 41 evm.model.tig00021521.12 no hits & (original description: no original description) 0.9186109153264371 41 evm.model.tig00000350.41 (original description: no original description) 0.9180304565932077 40 evm.model.tig00000624.18 no hits & (original description: no original description) 0.9177842797265724 41 evm.model.tig00000615.50 (at1g48090 : 115.0) calcium-dependent lipid-binding family protein; FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), Protein of unknown function DUF946 (InterPro:IPR009291), Vacuolar protein sorting-associated protein (InterPro:IPR009543), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973); BEST Arabidopsis thaliana protein match is: pleckstrin homology (PH) domain-containing protein (TAIR:AT4G17140.2); Has 2732 Blast hits to 1481 proteins in 212 species: Archae - 2; Bacteria - 15; Metazoa - 1181; Fungi - 466; Plants - 461; Viruses - 0; Other Eukaryotes - 607 (source: NCBI BLink). & (reliability: 230.0) & (original description: no original description) 0.9175578726745435 42 evm.model.tig00021293.10 no hits & (original description: no original description) 0.9172666821765945 43 evm.model.tig00021127.61 "(at3g44200 : 175.0) Encodes AtNek5, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes.Interacts physically with plant kinesins ARK1 and ARK2. Mutants show defects in root epidermal cell morphology, trichome branching and other epidermal cell abnormalities suggesting a rol e in epidermal cell differentiation. NEK6 co-localizes with cortical microtubules.; ""NIMA (never in mitosis, gene A)-related 6"" (NEK6); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: microtubule-based process, epidermal cell differentiation; LOCATED IN: cortical microtubule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: NIMA-related serine/threonine kinase 1 (TAIR:AT1G54510.3); Has 127749 Blast hits to 124714 proteins in 4408 species: Archae - 106; Bacteria - 14910; Metazoa - 47444; Fungi - 12949; Plants - 30417; Viruses - 519; Other Eukaryotes - 21404 (source: NCBI BLink). & (q02723|rkin1_secce : 104.0) Carbon catabolite derepressing protein kinase (EC 2.7.11.1) - Secale cereale (Rye) & (reliability: 350.0) & (original description: no original description)" 0.9166133258739027 44 evm.model.tig00000808.22 no hits & (original description: no original description) 0.9158581385644775 59 evm.model.tig00020616.46 no hits & (original description: no original description) 0.9157605570123526 61 evm.model.tig00021179.8 no hits & (original description: no original description) 0.9146664334230117 47 evm.model.tig00001215.10 no hits & (original description: no original description) 0.9143666067954825 56 evm.model.tig00020537.28 no hits & (original description: no original description) 0.9136689523759575 49 evm.model.tig00000821.58 no hits & (original description: no original description) 0.9135991788839459 70 evm.model.tig00020892.22 (q8s628|pdr13_orysa : 367.0) Pleiotropic drug resistance protein 13 - Oryza sativa (Rice) & (at1g15210 : 224.0) pleiotropic drug resistance 7 (PDR7); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: drug transmembrane transport; LOCATED IN: plasma membrane, chloroplast, membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: ABC-2 and Plant PDR ABC-type transporter family protein (TAIR:AT1G59870.1); Has 383488 Blast hits to 290790 proteins in 4017 species: Archae - 7218; Bacteria - 309544; Metazoa - 9443; Fungi - 7090; Plants - 6323; Viruses - 4; Other Eukaryotes - 43866 (source: NCBI BLink). & (reliability: 448.0) & (original description: no original description) 0.9133520174424901 73 evm.model.tig00021254.37 no hits & (original description: no original description) 0.9133338098401809 52 evm.model.tig00020693.34 no hits & (original description: no original description) 0.9130043112796812 53 evm.model.tig00022075.98 no hits & (original description: no original description) 0.9116747376085045 58 evm.model.tig00000133.40 no hits & (original description: no original description) 0.9115722428467017 94 evm.model.tig00001545.15 (at5g43710 : 317.0) Glycosyl hydrolase family 47 protein; FUNCTIONS IN: mannosyl-oligosaccharide 1,2-alpha-mannosidase activity, alpha-mannosidase activity, calcium ion binding; INVOLVED IN: protein amino acid N-linked glycosylation; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 47 (InterPro:IPR001382); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 47 protein (TAIR:AT1G27520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 634.0) & (original description: no original description) 0.9108849036923083 57 evm.model.tig00001042.32 no hits & (original description: no original description) 0.9102069552665648 66 evm.model.tig00022075.23 no hits & (original description: no original description) 0.9098545455647112 89 evm.model.tig00021590.9 no hits & (original description: no original description) 0.9098389131385839 60 evm.model.tig00000711.20 no hits & (original description: no original description) 0.9090036653039143 61 evm.model.tig00000691.33 no hits & (original description: no original description) 0.9088878739018786 62 evm.model.tig00000147.13 no hits & (original description: no original description) 0.9088446311962052 63 evm.model.tig00000711.66 no hits & (original description: no original description) 0.9074238592152591 85 evm.model.tig00000113.73 no hits & (original description: no original description) 0.907359928215517 68 evm.model.tig00000241.19 no hits & (original description: no original description) 0.9059970879611885 69 evm.model.tig00020537.18 no hits & (original description: no original description) 0.9054687416362286 71 evm.model.tig00000792.68 no hits & (original description: no original description) 0.9052968762680301 72 evm.model.tig00000215.26 no hits & (original description: no original description) 0.9049517698311439 73 evm.model.tig00001576.16 no hits & (original description: no original description) 0.9046152926604417 74 evm.model.tig00020610.140 no hits & (original description: no original description) 0.9044986843469072 75 evm.model.tig00000254.30 no hits & (original description: no original description) 0.9040845822027201 76 evm.model.tig00000655.65 (at5g05130 : 110.0) DNA/RNA helicase protein; FUNCTIONS IN: in 6 functions; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), HIP116, Rad5p N-terminal (InterPro:IPR014905), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: DNA/RNA helicase protein (TAIR:AT5G22750.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 220.0) & (original description: no original description) 0.903870231328408 78 evm.model.tig00021569.15 no hits & (original description: no original description) 0.9033823798856083 79 evm.model.tig00000851.36 no hits & (original description: no original description) 0.9032160967737534 80 evm.model.tig00000139.3 no hits & (original description: no original description) 0.9026260197996386 81 evm.model.tig00020684.14 no hits & (original description: no original description) 0.9025487674842482 82 evm.model.tig00000350.40 no hits & (original description: no original description) 0.9023615688747316 86 evm.model.tig00000767.31 no hits & (original description: no original description) 0.9021695526197672 85 evm.model.tig00001269.3 (at3g08800 : 91.7) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); Has 149 Blast hits to 148 proteins in 72 species: Archae - 0; Bacteria - 6; Metazoa - 108; Fungi - 3; Plants - 22; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 183.4) & (original description: no original description) 0.9019636469316563 86 evm.model.tig00000158.115 no hits & (original description: no original description) 0.9016951401482747 87 evm.model.tig00021590.19 no hits & (original description: no original description) 0.9010053519385027 90 evm.model.tig00020830.68 no hits & (original description: no original description) 0.9006011584383116 92 evm.model.tig00021127.136 no hits & (original description: no original description) 0.8991645275712047 95 evm.model.tig00020601.5 no hits & (original description: no original description) 0.8990188212303388 96 evm.model.tig00020911.36 (at5g66150 : 212.0) Glycosyl hydrolase family 38 protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: mannose metabolic process, carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: petal, leaf whorl, sperm cell, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Glycoside hydrolase/deacetylase, beta/alpha-barrel (InterPro:IPR011330), Glycoside hydrolase, family 38, central domain (InterPro:IPR015341), Glycoside hydrolase, family 38, core (InterPro:IPR000602), Glycosyl hydrolases 38, C-terminal (InterPro:IPR011682); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 38 protein (TAIR:AT5G13980.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 424.0) & (original description: no original description) 0.8989043001671805 97 evm.model.tig00020807.20 no hits & (original description: no original description) 0.8987713257613205 98 evm.model.tig00021122.9 no hits & (original description: no original description) 0.8978365558293632 99