Sequence Description Alias PCC hrr evm.model.tig00000246.8 no hits & (original description: no original description) 0.9421743564054634 5 evm.model.tig00000042.103 (at3g17470 : 120.0) Ca2+-activated RelA/spot homolog (CRSH); FUNCTIONS IN: GTP diphosphokinase activity, calcium ion binding; INVOLVED IN: guanosine tetraphosphate metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248), RelA/SpoT (InterPro:IPR007685); BEST Arabidopsis thaliana protein match is: RELA/SPOT homolog 3 (TAIR:AT1G54130.1); Has 14021 Blast hits to 13962 proteins in 3173 species: Archae - 6; Bacteria - 8120; Metazoa - 1259; Fungi - 992; Plants - 727; Viruses - 0; Other Eukaryotes - 2917 (source: NCBI BLink). & (reliability: 240.0) & (original description: no original description) 0.9269670255152775 2 evm.model.tig00020538.38 no hits & (original description: no original description) 0.9244022195377033 6 evm.model.tig00000042.104 (at5g43600 : 136.0) Encodes a protein with ureidoglycolate amidohydrolase activity in vitro. It is 27% identical and 43% similar to the E. coli allantoate amidohydrolase (AAH), but, in vitro assays with purified protein and allantoate as a substrate do not show any increase in ammonium concentration, indicating that there this enzyme has no AAH activity.; ureidoglycolate amidohydrolase (UAH); FUNCTIONS IN: metallopeptidase activity, ureidoglycolate hydrolase activity; INVOLVED IN: proteolysis, allantoin catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M20 (InterPro:IPR002933), Amidase, hydantoinase/carbamoylase (InterPro:IPR010158), Peptidase M20, dimerisation (InterPro:IPR011650); BEST Arabidopsis thaliana protein match is: allantoate amidohydrolase (TAIR:AT4G20070.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 272.0) & (original description: no original description) 0.9207633285239093 6 evm.model.tig00021290.12 (at1g80830 : 338.0) Thought to be involved in iron homeostasis. Induced in leaves in response to iron deficiency. Transgenic plants accumulate toxic levels of iron. Gene complements yeast iron uptake mutants.; natural resistance-associated macrophage protein 1 (NRAMP1); CONTAINS InterPro DOMAIN/s: Natural resistance-associated macrophage protein (InterPro:IPR001046); BEST Arabidopsis thaliana protein match is: NRAMP metal ion transporter 6 (TAIR:AT1G15960.1); Has 5566 Blast hits to 5511 proteins in 1695 species: Archae - 118; Bacteria - 4154; Metazoa - 357; Fungi - 273; Plants - 337; Viruses - 0; Other Eukaryotes - 327 (source: NCBI BLink). & (reliability: 676.0) & (original description: no original description) 0.9183392577633596 5 evm.model.tig00020538.37 no hits & (original description: no original description) 0.9169587305011985 6 evm.model.tig00020538.47 no hits & (original description: no original description) 0.9150654736686744 7 evm.model.tig00001222.9 no hits & (original description: no original description) 0.8969504560266054 8 evm.model.tig00021612.12 no hits & (original description: no original description) 0.8934786377674554 9 evm.model.tig00000241.41 no hits & (original description: no original description) 0.8793840094036117 10 evm.model.tig00020629.128 no hits & (original description: no original description) 0.8546393506404419 11 evm.model.tig00021428.30 no hits & (original description: no original description) 0.8507181160436 27 evm.model.tig00001056.6 no hits & (original description: no original description) 0.8495662250296521 13 evm.model.tig00000246.5 no hits & (original description: no original description) 0.8455947594273501 14 evm.model.tig00020538.36 no hits & (original description: no original description) 0.8397262951403998 15 evm.model.tig00021612.57 no hits & (original description: no original description) 0.8376332705655661 16 evm.model.tig00020563.159 no hits & (original description: no original description) 0.8356380282071314 20 evm.model.tig00000241.162 (at4g37270 : 359.0) Encodes a P1B-type ATPases that is localized to the chloroplast envelope and is involved in the transport of Cu into chloroplasts. It is essential for growth under high light conditions.; heavy metal atpase 1 (HMA1); FUNCTIONS IN: copper-exporting ATPase activity, ATPase activity, calcium-transporting ATPase activity, zinc transporting ATPase activity, cadmium-transporting ATPase activity; INVOLVED IN: cellular copper ion homeostasis, calcium ion transport, response to toxin, zinc ion homeostasis, response to light intensity; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, heavy metal translocating (InterPro:IPR006416), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating (InterPro:IPR006404), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: heavy metal atpase 2 (TAIR:AT4G30110.1); Has 36740 Blast hits to 31592 proteins in 3081 species: Archae - 714; Bacteria - 24289; Metazoa - 3807; Fungi - 1794; Plants - 1612; Viruses - 8; Other Eukaryotes - 4516 (source: NCBI BLink). & (reliability: 718.0) & (original description: no original description) 0.8346526703754129 38 evm.model.tig00020562.39 (at3g17790 : 102.0) purple acid phosphatase 17 (PAP17); CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 3 (TAIR:AT1G14700.1); Has 1229 Blast hits to 1218 proteins in 312 species: Archae - 4; Bacteria - 345; Metazoa - 336; Fungi - 8; Plants - 191; Viruses - 0; Other Eukaryotes - 345 (source: NCBI BLink). & (reliability: 204.0) & (original description: no original description) 0.8321866823593113 19 evm.model.tig00000042.173 no hits & (original description: no original description) 0.8277082760026324 29 evm.model.tig00020629.127 no hits & (original description: no original description) 0.8191682029103561 21 evm.model.tig00000385.36 no hits & (original description: no original description) 0.8126397359668703 46 evm.model.tig00001388.13 (o22101|hemh_orysa : 414.0) Ferrochelatase-2, chloroplast precursor (EC 4.99.1.1) (Ferrochelatase II) (Protoheme ferro-lyase 2) (Heme synthetase 2) - Oryza sativa (Rice) & (at2g30390 : 413.0) Encodes one of two ferrochelatase genes in Arabidopsis. Ferrochelatase is the terminal enzyme of heme biosynthesis. FC-II is speculated to operate in photosynthetic cytochromes; ferrochelatase 2 (FC2); FUNCTIONS IN: ferrochelatase activity; INVOLVED IN: heme biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferrochelatase (InterPro:IPR001015), Ferrochelatase, active site (InterPro:IPR019772); BEST Arabidopsis thaliana protein match is: ferrochelatase 1 (TAIR:AT5G26030.2). & (reliability: 826.0) & (original description: no original description) 0.8124665606654303 92 evm.model.tig00001628.3 (at1g63440 : 260.0) The Arabidopsis P-type ATPase HMA5 is involved in Cu detoxification. hma5 mutant plants exhibit Cu hypersensitivity, which is especially dramatic in roots where HMA5 is mostly expressed.; heavy metal atpase 5 (HMA5); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: detoxification of copper ion, response to copper ion; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121), ATPase, P type, cation/copper-transporter (InterPro:IPR006403), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), Heavy-metal-associated, conserved site (InterPro:IPR017969), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, heavy metal translocating (InterPro:IPR006416), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: copper-exporting ATPase / responsive-to-antagonist 1 / copper-transporting ATPase (RAN1) (TAIR:AT5G44790.1); Has 47061 Blast hits to 34034 proteins in 3459 species: Archae - 1020; Bacteria - 31793; Metazoa - 4958; Fungi - 2589; Plants - 1873; Viruses - 3; Other Eukaryotes - 4825 (source: NCBI BLink). & (reliability: 520.0) & (original description: no original description) 0.8122645815288293 28 evm.model.tig00001408.6 no hits & (original description: no original description) 0.8092924402995114 25 evm.model.tig00000826.20 (at5g43530 : 117.0) Helicase protein with RING/U-box domain; FUNCTIONS IN: in 6 functions; LOCATED IN: chloroplast envelope; EXPRESSED IN: shoot apex, embryo, male gametophyte, flower, seed; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), HIP116, Rad5p N-terminal (InterPro:IPR014905), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: DNA/RNA helicase protein (TAIR:AT5G22750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 234.0) & (original description: no original description) 0.8078991661970976 26 evm.model.tig00021015.9 no hits & (original description: no original description) 0.805057981723569 62 evm.model.tig00021537.49 no hits & (original description: no original description) 0.8049272359250159 52 evm.model.tig00021366.19 no hits & (original description: no original description) 0.7998861259207568 63 evm.model.tig00020934.47 (q6ty83|apx3_orysa : 160.0) Probable L-ascorbate peroxidase 3 (EC 1.11.1.11) (OsAPx03) - Oryza sativa (Rice) & (at4g35000 : 149.0) Encodes a microsomal ascorbate peroxidase APX3. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms. The APX3 protein interacts with AKR2 (ankyrin-containing protein that interacts with AFT1) and AFT1, a 14-3-3 protein.; ascorbate peroxidase 3 (APX3); FUNCTIONS IN: L-ascorbate peroxidase activity; INVOLVED IN: response to oxidative stress; LOCATED IN: in 7 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant ascorbate peroxidase (InterPro:IPR002207), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: ascorbate peroxidase 5 (TAIR:AT4G35970.1); Has 9863 Blast hits to 8656 proteins in 1251 species: Archae - 86; Bacteria - 3261; Metazoa - 20; Fungi - 794; Plants - 3685; Viruses - 0; Other Eukaryotes - 2017 (source: NCBI BLink). & (reliability: 298.0) & (original description: no original description) 0.7949162384824792 49 evm.model.tig00021494.27 no hits & (original description: no original description) 0.7947796859318013 71 evm.model.tig00000144.190 no hits & (original description: no original description) 0.7898439610923117 52 evm.model.tig00001373.2 no hits & (original description: no original description) 0.7850958478863903 33 evm.model.tig00020675.92 (at2g44740 : 140.0) cyclin p4;1 (CYCP4;1); CONTAINS InterPro DOMAIN/s: Negative regulatory factor PREG (InterPro:IPR012389), Cyclin-like (InterPro:IPR011028), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN P4;2 (TAIR:AT5G61650.1); Has 1474 Blast hits to 1416 proteins in 218 species: Archae - 0; Bacteria - 18; Metazoa - 247; Fungi - 710; Plants - 236; Viruses - 0; Other Eukaryotes - 263 (source: NCBI BLink). & (reliability: 280.0) & (original description: no original description) 0.7849204009764332 52 evm.model.tig00000970.22 no hits & (original description: no original description) 0.7813135109114455 36 evm.model.tig00020703.34 no hits & (original description: no original description) 0.7804592204994331 37 evm.model.tig00000545.3 (at1g18160 : 108.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G11850.1); Has 123759 Blast hits to 122075 proteins in 4739 species: Archae - 100; Bacteria - 12949; Metazoa - 47184; Fungi - 11113; Plants - 33371; Viruses - 486; Other Eukaryotes - 18556 (source: NCBI BLink). & (reliability: 208.0) & (original description: no original description) 0.7790867188286403 38 evm.model.tig00000204.84 no hits & (original description: no original description) 0.778539674225487 39 evm.model.tig00000615.20 no hits & (original description: no original description) 0.7775485788355861 40 evm.model.tig00021127.190 no hits & (original description: no original description) 0.7770343183492558 41 evm.model.tig00020903.7 no hits & (original description: no original description) 0.7748497003416426 83 evm.model.tig00000792.53 no hits & (original description: no original description) 0.7695587183207109 52 evm.model.tig00021435.53 no hits & (original description: no original description) 0.7676147345021281 83 evm.model.tig00020725.2 no hits & (original description: no original description) 0.7674904362717252 65 evm.model.tig00000042.172 no hits & (original description: no original description) 0.7668099150843041 52 evm.model.tig00000889.38 (at2g29650 : 126.0) Encodes an inorganic phosphate transporter that is localized to the thylakoid membrane.; anion transporter 1 (ANTR1); CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT4G00370.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 248.0) & (original description: no original description) 0.7666142311686243 59 evm.model.tig00020564.54 no hits & (original description: no original description) 0.7661174572718433 50 evm.model.tig00000248.71 no hits & (original description: no original description) 0.7655520754245958 74 evm.model.tig00000241.150 no hits & (original description: no original description) 0.7654831810977126 54 evm.model.tig00000344.14 no hits & (original description: no original description) 0.7642850663478588 78 evm.model.tig00000430.53 no hits & (original description: no original description) 0.7611954455492236 56 evm.model.tig00000076.56 no hits & (original description: no original description) 0.7578552004459753 90 evm.model.tig00020927.21 no hits & (original description: no original description) 0.7521802456089705 84 evm.model.tig00020660.37 (at1g21410 : 88.6) AtSKP2;1 is a homolog of human SKP2, the human F-box protein that recruits E2F1. Contains an F-box motif at the N-terminal region and a C-terminal Leu-rich repeat domain. Forms part of an E3-ubiquitin-ligase SCF (Skp1, cullin, F-box) complex and recruits phosphorylated AtE2Fc, a transcriptional factor that might play a role in cell division and during the transition from skotomorphogenesis to photomorphogenesis. AtSKP2;1 (At1g21410) and AtSKP2;2 (At1g77000) may be duplicated genes.; SKP2A; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Leucine-rich repeat, cysteine-containing subtype (InterPro:IPR006553); BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT1G77000.2); Has 8874 Blast hits to 3879 proteins in 263 species: Archae - 0; Bacteria - 386; Metazoa - 3510; Fungi - 1080; Plants - 2969; Viruses - 9; Other Eukaryotes - 920 (source: NCBI BLink). & (reliability: 177.2) & (original description: no original description) 0.7499699955607589 62 evm.model.tig00000142.20 no hits & (original description: no original description) 0.7471044395169779 65 evm.model.tig00020604.26 no hits & (original description: no original description) 0.7440534136110711 67 evm.model.tig00000841.12 no hits & (original description: no original description) 0.7439715863620412 68 evm.model.tig00001017.1 no hits & (original description: no original description) 0.7367633542461135 72 evm.model.tig00001532.2 no hits & (original description: no original description) 0.7337355154041434 74 evm.model.tig00020684.27 no hits & (original description: no original description) 0.7332125386073157 76 evm.model.tig00001056.2 no hits & (original description: no original description) 0.7331658457541421 77 evm.model.tig00020875.19 no hits & (original description: no original description) 0.7316177943754183 78 evm.model.tig00020934.5 no hits & (original description: no original description) 0.7266700317882335 81 evm.model.tig00000655.44 (at5g23330 : 122.0) Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: FMN adenylyltransferase activity; INVOLVED IN: riboflavin biosynthetic process; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), FAD synthetase (InterPro:IPR015864); BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT5G08340.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 244.0) & (original description: no original description) 0.726457431124368 82 evm.model.tig00000178.78 no hits & (original description: no original description) 0.7236335480818276 97 evm.model.tig00020564.55 no hits & (original description: no original description) 0.71594613318618 95 evm.model.tig00001278.13 no hits & (original description: no original description) 0.7154035244798329 97 evm.model.tig00020553.278 no hits & (original description: no original description) 0.712291323358935 98 evm.model.tig00000459.90 (at3g16340 : 396.0) pleiotropic drug resistance 1 (PDR1); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), Pleiotropic drug resistance protein PDR (InterPro:IPR005285), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 7 (TAIR:AT1G15210.1). & (q8gu92|pdr2_orysa : 375.0) Probable pleiotropic drug resistance protein 2 - Oryza sativa (Rice) & (reliability: 792.0) & (original description: no original description) 0.7115859788288877 99