Sequence Description Alias PCC hrr evm.model.tig00020904.132 no hits & (original description: no original description) 0.9469933617041684 1 evm.model.tig00020943.21 no hits & (original description: no original description) 0.9282690229609258 3 evm.model.tig00000823.14 no hits & (original description: no original description) 0.9268144350005354 3 evm.model.tig00021589.25 (p41347|ftrc_maize : 184.0) Ferredoxin-thioredoxin reductase catalytic chain, chloroplast precursor (EC 1.18.-.-) (FTR-C) (Ferredoxin-thioredoxin reductase subunit B) (FTR-B) - Zea mays (Maize) & (at2g04700 : 178.0) ferredoxin thioredoxin reductase catalytic beta chain family protein; FUNCTIONS IN: ferredoxin:thioredoxin reductase activity, ferredoxin reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin thioredoxin reductase, beta subunit (InterPro:IPR004209); Has 267 Blast hits to 267 proteins in 113 species: Archae - 18; Bacteria - 139; Metazoa - 0; Fungi - 0; Plants - 58; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (reliability: 356.0) & (original description: no original description) 0.9190510133550167 4 evm.model.tig00000350.19 no hits & (original description: no original description) 0.9176516599156984 5 evm.model.tig00020614.108 no hits & (original description: no original description) 0.9134010714686852 6 evm.model.tig00000169.34 (at4g04830 : 149.0) methionine sulfoxide reductase B5 (MSRB5); FUNCTIONS IN: peptide-methionine-(S)-S-oxide reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Methionine sulphoxide reductase B (InterPro:IPR002579), Mss4-like (InterPro:IPR011057); BEST Arabidopsis thaliana protein match is: methionine sulfoxide reductase B4 (TAIR:AT4G04810.1). & (reliability: 272.0) & (original description: no original description) 0.9100213963593662 10 evm.model.tig00021123.5 (at4g21090 : 142.0) MITOCHONDRIAL FERREDOXIN 2 (MFDX2); FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding, 2 iron, 2 sulfur cluster binding; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Adrenodoxin (InterPro:IPR001055), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), Adrenodoxin, iron-sulphur binding site (InterPro:IPR018298); BEST Arabidopsis thaliana protein match is: mitochondrial ferredoxin 1 (TAIR:AT4G05450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 284.0) & (original description: no original description) 0.9082044667760146 9 evm.model.tig00020903.22 no hits & (original description: no original description) 0.907071864056826 9 evm.model.tig00020911.37 no hits & (original description: no original description) 0.9056433859514946 12 evm.model.tig00001049.4 no hits & (original description: no original description) 0.9020965851372574 13 evm.model.tig00000241.124 no hits & (original description: no original description) 0.8924038735289099 34 evm.model.tig00001376.2 (original description: no original description) 0.8921086038241812 13 evm.model.tig00020675.39 no hits & (original description: no original description) 0.8890094229241089 33 evm.model.tig00020961.124 (at5g63510 : 135.0) Encodes a mitochondrial gamma carbonic anhydrase-like protein. Component of the NADH dehydrogenase complex.; gamma carbonic anhydrase like 1 (GAMMA CAL1); CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004); BEST Arabidopsis thaliana protein match is: gamma carbonic anhydrase-like 2 (TAIR:AT3G48680.1). & (reliability: 270.0) & (original description: no original description) 0.8848535745186256 37 evm.model.tig00000525.15 no hits & (original description: no original description) 0.8790421624602267 19 evm.model.tig00021719.7 no hits & (original description: no original description) 0.8783722380815217 18 evm.model.tig00000076.70 (at5g47890 : 93.2) NADH-ubiquinone oxidoreductase B8 subunit, putative; CONTAINS InterPro DOMAIN/s: Ribosomal protein/NADH dehydrogenase domain (InterPro:IPR007741), NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 2 (InterPro:IPR016464); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 186.4) & (original description: no original description) 0.876832745359159 18 evm.model.tig00000101.5 no hits & (original description: no original description) 0.8755928325918524 19 evm.model.tig00001366.19 no hits & (original description: no original description) 0.8755522847989556 65 evm.model.tig00020704.55 (at4g36420 : 90.5) Ribosomal protein L12 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, large ribosomal subunit; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L7/L12 (InterPro:IPR000206), Ribosomal protein L12, chloroplast (InterPro:IPR015608), Ribosomal protein L7/L12, oligomerisation (InterPro:IPR008932), Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like (InterPro:IPR014719), Ribosomal protein L7/L12, C-terminal (InterPro:IPR013823); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7/L12, oligomerisation;Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like (TAIR:AT1G70190.2); Has 8419 Blast hits to 8419 proteins in 2735 species: Archae - 0; Bacteria - 5617; Metazoa - 196; Fungi - 132; Plants - 254; Viruses - 0; Other Eukaryotes - 2220 (source: NCBI BLink). & (p02398|rk12_spiol : 82.8) 50S ribosomal protein L12, chloroplast precursor (CL12) - Spinacia oleracea (Spinach) & (reliability: 181.0) & (original description: no original description) 0.873299110917059 21 evm.model.tig00020961.112 no hits & (original description: no original description) 0.8688169641942876 22 evm.model.tig00000704.64 no hits & (original description: no original description) 0.8677062664369934 30 evm.model.tig00000350.14 (at3g03890 : 153.0) FMN binding; FUNCTIONS IN: FMN binding; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2470 (InterPro:IPR019595), FMN-binding split barrel (InterPro:IPR012349), Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain (InterPro:IPR011576), FMN-binding split barrel, related (InterPro:IPR009002), Haem iron utilisation protein, pyridoxamine 5'-phosphate domain-containing (InterPro:IPR014599); BEST Arabidopsis thaliana protein match is: Pyridoxamine 5'-phosphate oxidase family protein (TAIR:AT3G21140.1); Has 770 Blast hits to 770 proteins in 270 species: Archae - 0; Bacteria - 458; Metazoa - 13; Fungi - 0; Plants - 151; Viruses - 0; Other Eukaryotes - 148 (source: NCBI BLink). & (reliability: 306.0) & (original description: no original description) 0.8675944862406515 85 evm.model.tig00000870.11 no hits & (original description: no original description) 0.8674603250275221 25 evm.model.tig00021133.8 no hits & (original description: no original description) 0.8625156197928722 30 evm.model.tig00021612.37 (at3g45770 : 237.0) Polyketide synthase, enoylreductase family protein; FUNCTIONS IN: copper ion binding, zinc ion binding, ATP binding; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: ARP protein (REF) (TAIR:AT1G49670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 474.0) & (original description: no original description) 0.8603908928335264 71 evm.model.tig00021181.12 (at1g10500 : 143.0) Involved in chloroplast Fe-S cluster assembly. Located in the chloroplast stroma. Expressed preferentially in green tissues.; chloroplast-localized ISCA-like protein (CPISCA); CONTAINS InterPro DOMAIN/s: FeS cluster insertion, C-terminal, conserved site (InterPro:IPR017870), FeS cluster biogenesis (InterPro:IPR000361), FeS cluster insertion (InterPro:IPR016092); BEST Arabidopsis thaliana protein match is: Iron-sulphur cluster biosynthesis family protein (TAIR:AT5G03905.1); Has 10385 Blast hits to 10384 proteins in 1842 species: Archae - 43; Bacteria - 5944; Metazoa - 237; Fungi - 240; Plants - 172; Viruses - 0; Other Eukaryotes - 3749 (source: NCBI BLink). & (reliability: 286.0) & (original description: no original description) 0.859799197985695 30 evm.model.tig00001339.24 (at5g03905 : 102.0) Iron-sulphur cluster biosynthesis family protein; FUNCTIONS IN: iron-sulfur cluster binding, structural molecule activity; INVOLVED IN: iron-sulfur cluster assembly; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: FeS cluster biogenesis (InterPro:IPR000361), FeS cluster insertion (InterPro:IPR016092); BEST Arabidopsis thaliana protein match is: chloroplast-localized ISCA-like protein (TAIR:AT1G10500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 204.0) & (original description: no original description) 0.8583139538570843 29 evm.model.tig00020800.25 no hits & (original description: no original description) 0.8576963493902506 30 evm.model.tig00000852.34 (at5g08530 : 714.0) 51 kDa subunit of complex I (CI51); FUNCTIONS IN: 4 iron, 4 sulfur cluster binding, NAD or NADH binding, FMN binding, NADH dehydrogenase (ubiquinone) activity, oxidoreductase activity, acting on NADH or NADPH; INVOLVED IN: oxidation reduction, mitochondrial electron transport, NADH to ubiquinone; LOCATED IN: mitochondrion, mitochondrial respiratory chain complex I, respiratory chain complex I; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site (InterPro:IPR001949), NADH:ubiquinone oxidoreductase, 51kDa subunit (InterPro:IPR011538), NADH ubiquinone oxidoreductase, F subunit (InterPro:IPR011537), Soluble ligand binding domain (InterPro:IPR019554), NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding (InterPro:IPR019575); Has 8894 Blast hits to 8884 proteins in 1703 species: Archae - 49; Bacteria - 4484; Metazoa - 213; Fungi - 125; Plants - 97; Viruses - 0; Other Eukaryotes - 3926 (source: NCBI BLink). & (reliability: 1428.0) & (original description: no original description) 0.855848590757056 66 evm.model.tig00000865.8 (at1g03150 : 240.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT5G13780.1); Has 2433 Blast hits to 2433 proteins in 772 species: Archae - 233; Bacteria - 716; Metazoa - 629; Fungi - 398; Plants - 148; Viruses - 0; Other Eukaryotes - 309 (source: NCBI BLink). & (reliability: 480.0) & (original description: no original description) 0.8545871607808442 32 evm.model.tig00001042.12 (at2g33040 : 186.0) gamma subunit of Mt ATP synthase (ATP3); FUNCTIONS IN: zinc ion binding; INVOLVED IN: proton transport, ATP synthesis coupled proton transport; LOCATED IN: in 7 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, gamma subunit (InterPro:IPR000131); BEST Arabidopsis thaliana protein match is: ATPase, F1 complex, gamma subunit protein (TAIR:AT1G15700.1); Has 9548 Blast hits to 9546 proteins in 2754 species: Archae - 5; Bacteria - 5621; Metazoa - 285; Fungi - 151; Plants - 166; Viruses - 0; Other Eukaryotes - 3320 (source: NCBI BLink). & (p26360|atpg3_ipoba : 184.0) ATP synthase gamma chain, mitochondrial precursor (EC 3.6.3.14) - Ipomoea batatas (Sweet potato) (Batate) & (reliability: 372.0) & (original description: no original description) 0.8543392748238112 33 evm.model.tig00001107.23 no hits & (original description: no original description) 0.8464649987061594 46 evm.model.tig00000169.30 (at3g54826 : 92.8) Zim17-type zinc finger protein; CONTAINS InterPro DOMAIN/s: Zinc finger, Zim17-type (InterPro:IPR007853); Has 403 Blast hits to 403 proteins in 183 species: Archae - 0; Bacteria - 0; Metazoa - 114; Fungi - 127; Plants - 101; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (reliability: 185.6) & (original description: no original description) 0.8455275216535434 80 evm.model.tig00020734.50 no hits & (original description: no original description) 0.844937242513334 36 evm.model.tig00020557.26 no hits & (original description: no original description) 0.844045523723728 57 evm.model.tig00020912.36 (at3g58730 : 249.0) vacuolar ATP synthase subunit D (VATD) / V-ATPase D subunit / vacuolar proton pump D subunit (VATPD); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: ATP synthesis coupled proton transport; LOCATED IN: vacuolar membrane, plasma membrane, vacuole, membrane, plant-type vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V1/A1 complex, subunit D (InterPro:IPR002699); Has 1576 Blast hits to 1575 proteins in 678 species: Archae - 260; Bacteria - 676; Metazoa - 232; Fungi - 148; Plants - 90; Viruses - 0; Other Eukaryotes - 170 (source: NCBI BLink). & (reliability: 498.0) & (original description: no original description) 0.8438767830078207 38 evm.model.tig00000870.22 no hits & (original description: no original description) 0.8427070637054445 39 evm.model.tig00020553.201 (at5g45390 : 115.0) One of several nuclear-encoded ClpPs (caseinolytic protease). Contains a highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001).; CLP protease P4 (CLPP4); FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: chloroplast organization, regulation of timing of transition from vegetative to reproductive phase; LOCATED IN: in 7 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S14, ClpP, active site (InterPro:IPR018215), Peptidase S14, ClpP (InterPro:IPR001907); BEST Arabidopsis thaliana protein match is: CLP protease proteolytic subunit 3 (TAIR:AT1G66670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p56317|clpp_chlvu : 92.4) ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) (Endopeptidase Clp) - Chlorella vulgaris (Green alga) & (reliability: 230.0) & (original description: no original description) 0.8408652854749744 78 evm.model.tig00000342.1 (p23346|sodc5_maize : 164.0) Superoxide dismutase [Cu-Zn] 4AP (EC 1.15.1.1) - Zea mays (Maize) & (at1g08830 : 154.0) Encodes a cytosolic copper/zinc superoxide dismutase CSD1 that can detoxify superoxide radicals. Its expression is affected by miR398-directed mRNA cleavage. Regulated by biotic and abiotic stress.; copper/zinc superoxide dismutase 1 (CSD1); CONTAINS InterPro DOMAIN/s: Superoxide dismutase, copper/zinc, binding site (InterPro:IPR018152), Superoxide dismutase, copper/zinc binding (InterPro:IPR001424); BEST Arabidopsis thaliana protein match is: copper/zinc superoxide dismutase 2 (TAIR:AT2G28190.1); Has 4705 Blast hits to 4689 proteins in 1491 species: Archae - 6; Bacteria - 2000; Metazoa - 1249; Fungi - 303; Plants - 666; Viruses - 142; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 308.0) & (original description: no original description) 0.8378184803841277 98 evm.model.tig00001264.14 (at3g54900 : 139.0) A.thaliana PICOT protein.It activates CAX1 gene Calcium transport activity.In other organisms, PICOT proteins appear to play a negative regulatory role in cellular stress responses.; CAX interacting protein 1 (CXIP1); FUNCTIONS IN: antiporter activity, glutathione disulfide oxidoreductase activity; INVOLVED IN: cation transport; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336), Glutaredoxin-related protein (InterPro:IPR004480); BEST Arabidopsis thaliana protein match is: thioredoxin family protein (TAIR:AT4G04950.1); Has 5270 Blast hits to 5080 proteins in 1299 species: Archae - 26; Bacteria - 2196; Metazoa - 419; Fungi - 285; Plants - 426; Viruses - 0; Other Eukaryotes - 1918 (source: NCBI BLink). & (reliability: 278.0) & (original description: no original description) 0.8370090235741745 44 evm.model.tig00020675.93 no hits & (original description: no original description) 0.8365511314398809 54 evm.model.tig00020554.24 no hits & (original description: no original description) 0.834571210865498 46 evm.model.tig00001030.41 no hits & (original description: no original description) 0.8328740625673913 48 evm.model.tig00001001.25 (p49104|rab2b_maize : 357.0) Ras-related protein Rab-2-B - Zea mays (Maize) & (at4g17170 : 348.0) member of RAB gene family; RAB GTPase homolog B1C (RABB1C); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: ER to Golgi vesicle-mediated transport, pollen sperm cell differentiation, cell growth; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: GTP-binding 2 (TAIR:AT4G35860.1); Has 27116 Blast hits to 27043 proteins in 734 species: Archae - 17; Bacteria - 131; Metazoa - 14131; Fungi - 4055; Plants - 2966; Viruses - 20; Other Eukaryotes - 5796 (source: NCBI BLink). & (reliability: 696.0) & (original description: no original description) 0.830348300294259 54 evm.model.tig00000157.16 no hits & (original description: no original description) 0.8297317488776712 50 evm.model.tig00001472.7 no hits & (original description: no original description) 0.8280282129448385 51 evm.model.tig00021127.9 no hits & (original description: no original description) 0.8267210302784066 52 evm.model.tig00020610.115 (q84zc0|vath_orysa : 286.0) Probable vacuolar ATP synthase subunit H (EC 3.6.3.14) (V-ATPase H subunit) (Vacuolar proton pump subunit H) - Oryza sativa (Rice) & (at3g42050 : 278.0) vacuolar ATP synthase subunit H family protein; FUNCTIONS IN: binding, hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances, proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: ATP synthesis coupled proton transport; LOCATED IN: vacuolar membrane, chloroplast, plasma membrane, vacuole, plant-type vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V1 complex, subunit H (InterPro:IPR004908), ATPase, V1 complex, subunit H, C-terminal (InterPro:IPR011987), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); Has 505 Blast hits to 479 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 202; Fungi - 135; Plants - 70; Viruses - 0; Other Eukaryotes - 98 (source: NCBI BLink). & (reliability: 556.0) & (original description: no original description) 0.8242941615850734 55 evm.model.tig00020614.87 no hits & (original description: no original description) 0.8235668656011422 56 evm.model.tig00000737.37 (p15451|cyc_chlre : 164.0) Cytochrome c - Chlamydomonas reinhardtii & (at1g22840 : 150.0) Encodes cytochrome c. Contains two site II (TGGGCC/T) elements, which interact with a TCP-domain transcription factor, and a downstream internal telomeric repeat, and are required for expression of the Cytc-1 gene. Promoter directs preferential expression in root and shoot meristems and in anthers.; CYTOCHROME C-1 (CYTC-1); FUNCTIONS IN: electron carrier activity, copper ion binding; INVOLVED IN: cell proliferation; LOCATED IN: mitochondrion, plasma membrane; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c, class IA/ IB (InterPro:IPR002327), Cytochrome c, class I (InterPro:IPR003088), Cytochrome c domain (InterPro:IPR009056); BEST Arabidopsis thaliana protein match is: cytochrome c-2 (TAIR:AT4G10040.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 300.0) & (original description: no original description) 0.823130861583388 57 evm.model.tig00020903.35 no hits & (original description: no original description) 0.822311219909463 58 evm.model.tig00000459.28 no hits & (original description: no original description) 0.8222959830740916 59 evm.model.tig00000342.10 no hits & (original description: no original description) 0.820945724647328 96 evm.model.tig00021293.18 no hits & (original description: no original description) 0.8204870038476147 67 evm.model.tig00000655.14 no hits & (original description: no original description) 0.8196825366860251 63 evm.model.tig00020961.43 no hits & (original description: no original description) 0.8187754476849568 64 evm.model.tig00000093.223 (at1g19580 : 240.0) Encodes mitochondrial gamma carbonic anhydrase. Component of the NADH dehydrogenase complex.; gamma carbonic anhydrase 1 (GAMMA CA1); CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004); BEST Arabidopsis thaliana protein match is: gamma carbonic anhydrase 3 (TAIR:AT5G66510.1). & (reliability: 480.0) & (original description: no original description) 0.8186868360875955 65 evm.model.tig00001437.8 no hits & (original description: no original description) 0.8177514857811956 66 evm.model.tig00020563.155 (p56317|clpp_chlvu : 251.0) ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) (Endopeptidase Clp) - Chlorella vulgaris (Green alga) & (atcg00670 : 210.0) Encodes the only ClpP (caseinolytic protease) encoded within the plastid genome. Contains a highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). Part of the 350 kDa chloroplast Clp complex. The name reflects nomenclature described in Adam et. al (2001).; plastid-encoded CLP P (PCLPP); FUNCTIONS IN: serine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast thylakoid membrane, chloroplastic endopeptidase Clp complex, plastid stroma, chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S14, ClpP, active site (InterPro:IPR018215), Peptidase S14, ClpP (InterPro:IPR001907); BEST Arabidopsis thaliana protein match is: CLP protease proteolytic subunit 2 (TAIR:AT1G12410.1). & (reliability: 420.0) & (original description: no original description) 0.8171363013360377 67 evm.model.tig00020938.1 no hits & (original description: no original description) 0.8160284894159451 69 evm.model.tig00001333.31 no hits & (original description: no original description) 0.8149147707077794 93 evm.model.tig00021435.34 no hits & (original description: no original description) 0.8143258011533053 73 evm.model.tig00000076.153 no hits & (original description: no original description) 0.8133006468175379 74 evm.model.tig00020629.85 no hits & (original description: no original description) 0.8111523180295128 76 evm.model.tig00001249.9 (at3g02730 : 80.5) thioredoxin F-type 1 (TRXF1); FUNCTIONS IN: enzyme activator activity; INVOLVED IN: positive regulation of catalytic activity; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336), Thioredoxin, conserved site (InterPro:IPR017937); BEST Arabidopsis thaliana protein match is: thioredoxin F2 (TAIR:AT5G16400.1); Has 15154 Blast hits to 14708 proteins in 2900 species: Archae - 210; Bacteria - 7832; Metazoa - 1846; Fungi - 908; Plants - 1556; Viruses - 3; Other Eukaryotes - 2799 (source: NCBI BLink). & (reliability: 161.0) & (original description: no original description) 0.8090230183040347 78 evm.model.tig00000655.15 no hits & (original description: no original description) 0.8062688887880877 80 evm.model.tig00000215.63 (at3g59650 : 86.3) mitochondrial ribosomal protein L51/S25/CI-B8 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein/NADH dehydrogenase domain (InterPro:IPR007741). & (reliability: 172.6) & (original description: no original description) 0.8027512864989571 81 evm.model.tig00001355.8 no hits & (original description: no original description) 0.8016935957921395 82 evm.model.tig00000955.2 no hits & (original description: no original description) 0.8012809654772787 83 evm.model.tig00000037.8 no hits & (original description: no original description) 0.8007051323295895 84 evm.model.tig00001694.7 no hits & (original description: no original description) 0.7987512524135698 87 evm.model.tig00000025.22 (at4g31460 : 95.5) Ribosomal L28 family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L28 (InterPro:IPR001383); Has 1063 Blast hits to 1063 proteins in 348 species: Archae - 0; Bacteria - 428; Metazoa - 98; Fungi - 129; Plants - 40; Viruses - 0; Other Eukaryotes - 368 (source: NCBI BLink). & (reliability: 191.0) & (original description: no original description) 0.7982469120075922 89 evm.model.tig00021122.13 no hits & (original description: no original description) 0.7979922571849891 90 evm.model.tig00020903.36 no hits & (original description: no original description) 0.7976891768643056 93 evm.model.tig00021357.5 no hits & (original description: no original description) 0.7970376362606616 94 evm.model.tig00001299.16 (at5g44450 : 124.0) methyltransferases; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF858, methyltransferase-like (InterPro:IPR008576); Has 501 Blast hits to 497 proteins in 206 species: Archae - 0; Bacteria - 15; Metazoa - 174; Fungi - 136; Plants - 83; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (reliability: 248.0) & (original description: no original description) 0.7967915293102169 98 evm.model.tig00000692.72 no hits & (original description: no original description) 0.7964901476582118 96 evm.model.tig00000248.11 no hits & (original description: no original description) 0.7953046089357424 98 evm.model.tig00020723.61 no hits & (original description: no original description) 0.79429439555993 100