Sequence Description Alias PCC hrr evm.model.tig00000870.4 (at5g07910 : 95.9) Leucine-rich repeat (LRR) family protein; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30105.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 184.8) & (original description: no original description) 0.9538083847798616 4 evm.model.tig00001110.5 (at5g63860 : 82.4) UV-B-specific signaling component that orchestrates expression of a range of genes with vital UV-protective functions. Located in the nucleus and the cytosol. Associates with chromatin via histones. UV-B light promotes URV8 protein accumulation in the nucleus.; UVB-RESISTANCE 8 (UVR8); FUNCTIONS IN: chromatin binding, guanyl-nucleotide exchange factor activity; INVOLVED IN: response to UV, response to UV-B; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain (TAIR:AT5G12350.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 164.8) & (original description: no original description) 0.9483793171105778 9 evm.model.tig00021612.17 no hits & (original description: no original description) 0.9462076615773181 23 evm.model.tig00001065.37 no hits & (original description: no original description) 0.9457693356903966 4 evm.model.tig00000480.62 no hits & (original description: no original description) 0.9447095916471171 7 evm.model.tig00001224.24 no hits & (original description: no original description) 0.9419584585325199 8 evm.model.tig00021312.5 no hits & (original description: no original description) 0.9379571814197467 16 evm.model.tig00001071.10 no hits & (original description: no original description) 0.937571499565886 31 evm.model.tig00001368.6 no hits & (original description: no original description) 0.9359149609047858 9 evm.model.tig00020723.30 no hits & (original description: no original description) 0.9358396387894481 40 evm.model.tig00021680.15 (p49027|gblp_orysa : 91.3) Guanine nucleotide-binding protein subunit beta-like protein (GPB-LR) (RWD) - Oryza sativa (Rice) & (at3g18130 : 88.6) Encodes a protein with similarity to mammalian RACKs. RACKs function to shuttle activated protein kinase C to different subcellular sites and may also function as a scaffold through physical interactions with other proteins. RACK1C has no phenotype on its own and probably acts redundantly with RACK1A and RACK1B.; receptor for activated C kinase 1C (RACK1C_AT); FUNCTIONS IN: nucleotide binding; INVOLVED IN: shoot development, root development; LOCATED IN: nucleolus, heterotrimeric G-protein complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: receptor for activated C kinase 1B (TAIR:AT1G48630.1); Has 88582 Blast hits to 37057 proteins in 965 species: Archae - 74; Bacteria - 10338; Metazoa - 34853; Fungi - 20136; Plants - 11319; Viruses - 6; Other Eukaryotes - 11856 (source: NCBI BLink). & (reliability: 174.8) & (original description: no original description) 0.9330469483033522 32 evm.model.tig00020610.74 no hits & (original description: no original description) 0.9323677292797792 12 evm.model.tig00001416.9 no hits & (original description: no original description) 0.931972545000442 17 evm.model.tig00000455.34 no hits & (original description: no original description) 0.9308268175578126 14 evm.model.tig00021721.15 no hits & (original description: no original description) 0.9304510202553559 25 evm.model.tig00001472.8 no hits & (original description: no original description) 0.9303931236164174 16 evm.model.tig00000498.49 no hits & (original description: no original description) 0.9299023298485941 17 evm.model.tig00001067.21 no hits & (original description: no original description) 0.9295884071481859 29 evm.model.tig00000451.7 no hits & (original description: no original description) 0.9293773916496205 56 evm.model.tig00020563.153 no hits & (original description: no original description) 0.9286577497470122 61 evm.model.tig00020510.112 no hits & (original description: no original description) 0.9284118127915253 21 evm.model.tig00020554.81 no hits & (original description: no original description) 0.9248343440257724 39 evm.model.tig00001065.18 no hits & (original description: no original description) 0.9241531688016346 84 evm.model.tig00000841.6 (at2g17440 : 130.0) Encodes PIRL5, a member of the Plant Intracellular Ras-group-related LRRs (Leucine rich repeat proteins). PIRLs are a distinct, plant-specific class of intracellular LRRs that likely mediate protein interactions, possibly in the context of signal transduction.; plant intracellular ras group-related LRR 5 (PIRL5); LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: plant intracellular ras group-related LRR 4 (TAIR:AT4G35470.1); Has 100264 Blast hits to 38283 proteins in 1358 species: Archae - 22; Bacteria - 10106; Metazoa - 37622; Fungi - 3439; Plants - 42778; Viruses - 28; Other Eukaryotes - 6269 (source: NCBI BLink). & (p93194|rpk1_iponi : 94.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 242.0) & (original description: no original description) 0.9239895343516478 32 evm.model.tig00000863.42 no hits & (original description: no original description) 0.9232693673926905 25 evm.model.tig00000383.91 no hits & (original description: no original description) 0.9219704069116812 26 evm.model.tig00000131.7 (at5g35750 : 89.7) Encodes histidine kinase AHK2.; histidine kinase 2 (HK2); FUNCTIONS IN: osmosensor activity, cytokinin receptor activity, protein histidine kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 3 (TAIR:AT1G27320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 179.4) & (original description: no original description) 0.9217399292587759 27 evm.model.tig00000270.16 no hits & (original description: no original description) 0.9214085439544903 90 evm.model.tig00000405.24 no hits & (original description: no original description) 0.9213915594954736 82 evm.model.tig00000241.8 no hits & (original description: no original description) 0.9213493331856121 63 evm.model.tig00020930.11 no hits & (original description: no original description) 0.9211009759319948 55 evm.model.tig00020675.81 (at3g55850 : 83.2) Encodes a product that might regulate nucleo-cytoplasmic trafficking of an intermediate(s) involved in phyA signal transduction. Differs from isoform 2 only in the first few N-terminal amino acids.; LONG AFTER FAR-RED 3 (LAF3); FUNCTIONS IN: hydrolase activity, hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds; INVOLVED IN: biological_process unknown; LOCATED IN: perinuclear region of cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amidohydrolase 3 (InterPro:IPR013108), Metal-dependent hydrolase, composite domain (InterPro:IPR011059); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 166.4) & (original description: no original description) 0.9209149985827105 49 evm.model.tig00021680.28 no hits & (original description: no original description) 0.9207204229197772 76 evm.model.tig00020563.41 no hits & (original description: no original description) 0.9206097619664281 34 evm.model.tig00020537.41 no hits & (original description: no original description) 0.9200967224960623 36 evm.model.tig00001336.20 no hits & (original description: no original description) 0.9200578952777231 49 evm.model.tig00000142.2 (at1g30970 : 120.0) Encodes SUF4 (SUPPRESSOR of FRI 4), a putative zinc-finger-containing transcription factor that is required for delayed flowering in winter-annual Arabidopsis. suf4 mutations strongly suppress the late-flowering phenotype of FRI (FRIGIDA) mutants. suf4 mutants also show reduced H3K4 trimethylation at FLC (FLOWERING LOCUS C), a floral inhibitor. SUF4 may act to specifically recruit a putative histone H3 methyltransferase EFS (EARLY FLOWERING IN SHORT DAYS) and the PAF1-like complex to the FLC locus.; suppressor of FRIGIDA4 (SUF4); FUNCTIONS IN: DNA binding, protein homodimerization activity, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: histone H3-K4 methylation, negative regulation of flower development, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 20927 Blast hits to 14395 proteins in 967 species: Archae - 31; Bacteria - 3069; Metazoa - 8441; Fungi - 3219; Plants - 3230; Viruses - 675; Other Eukaryotes - 2262 (source: NCBI BLink). & (reliability: 240.0) & (original description: no original description) 0.9200418190317758 47 evm.model.tig00021569.13 no hits & (original description: no original description) 0.9199342874311962 39 evm.model.tig00000042.27 no hits & (original description: no original description) 0.9194289844745733 68 evm.model.tig00000769.11 no hits & (original description: no original description) 0.9192470376079452 41 evm.model.tig00000383.57 (at5g10630 : 146.0) Translation elongation factor EF1A/initiation factor IF2gamma family protein; FUNCTIONS IN: GTP binding, translation elongation factor activity, GTPase activity, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Zinc finger, RanBP2-type (InterPro:IPR001876), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation elongation factor EF1A/initiation factor IF2gamma family protein (TAIR:AT1G18070.2). & (q41803|ef1a_maize : 140.0) Elongation factor 1-alpha (EF-1-alpha) - Zea mays (Maize) & (reliability: 292.0) & (original description: no original description) 0.9189269971695346 42 evm.model.tig00000626.7 no hits & (original description: no original description) 0.9179490210022552 43 evm.model.tig00020629.137 no hits & (original description: no original description) 0.9172544411452095 45 evm.model.tig00021374.16 no hits & (original description: no original description) 0.9171696422262637 46 evm.model.tig00000802.58 no hits & (original description: no original description) 0.9165803297376158 88 evm.model.tig00000808.45 no hits & (original description: no original description) 0.91630647522306 49 evm.model.tig00020943.96 no hits & (original description: no original description) 0.9162858242191911 50 evm.model.tig00000113.36 no hits & (original description: no original description) 0.9162512058619766 51 evm.model.tig00000743.18 no hits & (original description: no original description) 0.9153499113746331 71 evm.model.tig00000455.27 no hits & (original description: no original description) 0.9152910334916442 54 evm.model.tig00000402.44 (at3g57420 : 102.0) Protein of unknown function (DUF288); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF288 (InterPro:IPR005049); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF288) (TAIR:AT2G41770.1); Has 197 Blast hits to 197 proteins in 30 species: Archae - 2; Bacteria - 9; Metazoa - 50; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). & (reliability: 204.0) & (original description: no original description) 0.9150070182794239 72 evm.model.tig00000076.5 (at3g02850 : 138.0) Encodes SKOR, a member of Shaker family potassium ion (K+) channel. This family includes five groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inward rectifying channel): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500). Mediates the delivery of K+ from stelar cells to the xylem in the roots towards the shoot. mRNA accumulation is modulated by abscisic acid. K+ gating activity is modulated by external and internal K+.; STELAR K+ outward rectifier (SKOR); FUNCTIONS IN: outward rectifier potassium channel activity, cyclic nucleotide binding; INVOLVED IN: potassium ion transport, response to abscisic acid stimulus; LOCATED IN: membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Potassium channel, voltage-dependent, EAG/ELK/ERG (InterPro:IPR003938), Protein of unknown function DUF3354 (InterPro:IPR021789), Ankyrin repeat-containing domain (InterPro:IPR020683), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: gated outwardly-rectifying K+ channel (TAIR:AT5G37500.1); Has 82938 Blast hits to 34972 proteins in 1815 species: Archae - 147; Bacteria - 10317; Metazoa - 39460; Fungi - 7131; Plants - 3765; Viruses - 1138; Other Eukaryotes - 20980 (source: NCBI BLink). & (q8vyx2|akt1_orysa : 118.0) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (reliability: 276.0) & (original description: no original description) 0.9140759867953264 90 evm.model.tig00000788.3 no hits & (original description: no original description) 0.913689376517704 93 evm.model.tig00000981.14 (at2g36390 : 474.0) Encodes a starch branching enzyme (EC.2.4.1.18) similar to SBE2 from maize and rice. Expressed throughout plant tissues.; starch branching enzyme 2.1 (SBE2.1); FUNCTIONS IN: 1,4-alpha-glucan branching enzyme activity; INVOLVED IN: amylopectin biosynthetic process, starch metabolic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 13, N-terminal (InterPro:IPR004193), Immunoglobulin E-set (InterPro:IPR014756), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Alpha-amylase, C-terminal all beta (InterPro:IPR006048), Immunoglobulin-like fold (InterPro:IPR013783), Glycosyl hydrolase, family 13, all-beta (InterPro:IPR013780), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047); BEST Arabidopsis thaliana protein match is: starch branching enzyme 2.2 (TAIR:AT5G03650.1); Has 15972 Blast hits to 15848 proteins in 2360 species: Archae - 125; Bacteria - 12355; Metazoa - 437; Fungi - 446; Plants - 1422; Viruses - 0; Other Eukaryotes - 1187 (source: NCBI BLink). & (q08047|glgb_maize : 404.0) 1,4-alpha-glucan branching enzyme IIB, chloroplast precursor (EC 2.4.1.18) (Starch branching enzyme IIB) (Q-enzyme) - Zea mays (Maize) & (reliability: 948.0) & (original description: no original description) 0.9131578346004602 83 evm.model.tig00000658.15 no hits & (original description: no original description) 0.912904798377032 59 evm.model.tig00001215.10 no hits & (original description: no original description) 0.9126651938588222 63 evm.model.tig00001086.35 no hits & (original description: no original description) 0.9122059701500296 61 evm.model.tig00020911.50 no hits & (original description: no original description) 0.9121090794042509 80 evm.model.tig00020660.65 no hits & (original description: no original description) 0.9114127178681145 65 evm.model.tig00021373.13 no hits & (original description: no original description) 0.9109709531455719 67 evm.model.tig00000361.41 no hits & (original description: no original description) 0.9108313494244928 68 evm.model.tig00020710.50 no hits & (original description: no original description) 0.9106724231853328 69 evm.model.tig00001490.5 no hits & (original description: no original description) 0.9105223586236583 70 evm.model.tig00000821.58 no hits & (original description: no original description) 0.910203383452998 80 evm.model.tig00020806.18 no hits & (original description: no original description) 0.9101165887120317 73 evm.model.tig00000478.26 no hits & (original description: no original description) 0.9090614928227433 79 evm.model.tig00000215.22 (q6eu10|mta70_orysa : 369.0) Probable N6-adenosine-methyltransferase MT-A70-like (EC 2.1.1.62) - Oryza sativa (Rice) & (at4g10760 : 368.0) mRNAadenosine methylase (MTA); FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity; INVOLVED IN: embryo development ending in seed dormancy, mRNA methylation; LOCATED IN: nuclear speck, chloroplast; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MT-A70 (InterPro:IPR007757); BEST Arabidopsis thaliana protein match is: Methyltransferase MT-A70 family protein (TAIR:AT4G09980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 736.0) & (original description: no original description) 0.9090382919683995 77 evm.model.tig00000254.42 no hits & (original description: no original description) 0.9084154671804037 79 evm.model.tig00000655.66 no hits & (original description: no original description) 0.908033459761896 81 evm.model.tig00000944.27 no hits & (original description: no original description) 0.9073434889351911 82 evm.model.tig00000042.169 no hits & (original description: no original description) 0.9073364118692486 83 evm.model.tig00020961.70 no hits & (original description: no original description) 0.9067446692719777 84 evm.model.tig00020825.6 no hits & (original description: no original description) 0.906529332199368 85 evm.model.tig00020660.23 (at4g10180 : 270.0) Encodes a nuclear-localized protein that acts as a repressor of photomorphogenesis and may be involved in chromatin remodeling.; DE-ETIOLATED 1 (DET1); FUNCTIONS IN: catalytic activity; INVOLVED IN: DNA repair, negative regulation of photomorphogenesis; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: De-etiolated protein 1, Det1 (InterPro:IPR019138), Six-hairpin glycosidase-like (InterPro:IPR008928); Has 248 Blast hits to 240 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 106; Fungi - 0; Plants - 132; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 540.0) & (original description: no original description) 0.906370547025826 86 evm.model.tig00020675.19 no hits & (original description: no original description) 0.9051363808831419 91 evm.model.tig00001067.27 no hits & (original description: no original description) 0.9048587347611924 93 evm.model.tig00000632.14 no hits & (original description: no original description) 0.9029230056584091 96 evm.model.tig00000057.76 no hits & (original description: no original description) 0.9020842703681534 98 evm.model.tig00000498.4 no hits & (original description: no original description) 0.9016865173114916 99