Sequence Description Alias PCC hrr evm.model.tig00000523.25 no hits & (original description: no original description) 0.9337376114517315 2 evm.model.tig00000383.49 (at4g08500 : 80.5) Encodes a member of the A1 subgroup of the MEKK (MAPK/ERK kinase kinase) family. MEKK is another name for Mitogen-Activated Protein Kinase Kinase Kinase (MAPKKK or MAP3K). This subgroup has four members: At4g08500 (MEKK1, also known as ARAKIN, MAP3Kb1, MAPKKK8), At4g08480 (MEKK2, also known as MAP3Kb4, MAPKKK9), At4g08470 (MEKK3, also known as MAP3Kb3, MAPKKK10) and At4g12020 (MEKK4, also known as MAP3Kb5, MAPKKK11, WRKY19). Nomenclatures for mitogen-activated protein kinases are described in Trends in Plant Science 2002, 7(7):301. Mediates cold, salt, cadmium and wounding stress signalling. Phosphorylates MEK1.; MAPK/ERK kinase kinase 1 (MEKK1); FUNCTIONS IN: protein binding, kinase binding, DNA binding, MAP kinase kinase kinase activity, kinase activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 9 (TAIR:AT4G08480.1); Has 132336 Blast hits to 130259 proteins in 4567 species: Archae - 142; Bacteria - 14700; Metazoa - 49430; Fungi - 12971; Plants - 32949; Viruses - 685; Other Eukaryotes - 21459 (source: NCBI BLink). & (reliability: 161.0) & (original description: no original description) 0.9251583442032867 6 evm.model.tig00021612.19 no hits & (original description: no original description) 0.906426830222352 38 evm.model.tig00020604.23 no hits & (original description: no original description) 0.9056821240658114 19 evm.model.tig00021468.5 no hits & (original description: no original description) 0.9046795040096686 19 evm.model.tig00020904.65 no hits & (original description: no original description) 0.9006546858785374 9 evm.model.tig00001001.2 no hits & (original description: no original description) 0.8980648649275057 7 evm.model.tig00000691.12 no hits & (original description: no original description) 0.8965466526196024 13 evm.model.tig00021179.85 no hits & (original description: no original description) 0.8930665019045433 29 evm.model.tig00021127.100 no hits & (original description: no original description) 0.8927313107742645 10 evm.model.tig00000361.56 no hits & (original description: no original description) 0.8918336046744484 33 evm.model.tig00000663.61 no hits & (original description: no original description) 0.8917894514146644 46 evm.model.tig00001545.4 no hits & (original description: no original description) 0.8899144754618398 13 evm.model.tig00020563.69 no hits & (original description: no original description) 0.8894750610366406 14 evm.model.tig00021489.3 (at3g21090 : 172.0) ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: response to karrikin; LOCATED IN: membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT1G51500.1); Has 380370 Blast hits to 349027 proteins in 4089 species: Archae - 6846; Bacteria - 303738; Metazoa - 8409; Fungi - 6671; Plants - 5430; Viruses - 12; Other Eukaryotes - 49264 (source: NCBI BLink). & (q7fmw4|pdr15_orysa : 151.0) Pleiotropic drug resistance protein 15 - Oryza sativa (Rice) & (reliability: 344.0) & (original description: no original description) 0.8888991513784003 15 evm.model.tig00020684.2 no hits & (original description: no original description) 0.8885191401014632 23 evm.model.tig00000769.50 no hits & (original description: no original description) 0.8884164201137598 17 evm.model.tig00020927.54 no hits & (original description: no original description) 0.8873987870101108 18 evm.model.tig00000237.23 no hits & (original description: no original description) 0.8849810619901188 19 evm.model.tig00020553.294 no hits & (original description: no original description) 0.878374583372112 20 evm.model.tig00000194.25 (at3g12810 : 432.0) Encodes a protein similar to ATP-dependent, chromatin-remodeling proteins of the ISWI and SWI2/SNF2 family. Genetic analyses suggest that this gene is involved in multiple flowering pathways. Mutations in PIE1 results in suppression of FLC-mediated delay of flowering and causes early flowering in noninductive photoperiods independently of FLC. PIE1 is required for expression of FLC in the shoot apex but not in the root.Along with ARP6 forms a complex to deposit modified histone H2A.Z at several loci within the genome. This modification alters the expression of the target genes (i.e. FLC, MAF4, MAF6).; PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 (PIE1); FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; INVOLVED IN: in 6 processes; LOCATED IN: SWI/SNF complex, cell wall, chromatin remodeling complex; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: HSA (InterPro:IPR006562), HAS subgroup (InterPro:IPR013999), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), SNF2-related (InterPro:IPR000330), MYB-like (InterPro:IPR017877), SANT, DNA-binding (InterPro:IPR001005), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: INO80 ortholog (TAIR:AT3G57300.1); Has 42311 Blast hits to 26312 proteins in 2357 species: Archae - 246; Bacteria - 10217; Metazoa - 11172; Fungi - 7336; Plants - 2916; Viruses - 500; Other Eukaryotes - 9924 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 149.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 864.0) & (original description: no original description) 0.877308155652043 91 evm.model.tig00000984.21 no hits & (original description: no original description) 0.874737356017623 23 evm.model.tig00020944.19 no hits & (original description: no original description) 0.8733495557897542 24 evm.model.tig00020556.87 no hits & (original description: no original description) 0.8696063434920591 71 evm.model.tig00021281.13 no hits & (original description: no original description) 0.869601155840841 26 evm.model.tig00000402.76 (at5g35750 : 124.0) Encodes histidine kinase AHK2.; histidine kinase 2 (HK2); FUNCTIONS IN: osmosensor activity, cytokinin receptor activity, protein histidine kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 3 (TAIR:AT1G27320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q9m7m1|etr1_prupe : 122.0) Ethylene receptor (EC 2.7.13.3) - Prunus persica (Peach) & (reliability: 248.0) & (original description: no original description) 0.8694429559274459 27 evm.model.tig00020965.15 no hits & (original description: no original description) 0.869325243753546 37 evm.model.tig00000180.26 no hits & (original description: no original description) 0.8685341804608407 80 evm.model.tig00020660.47 (at2g28315 : 140.0) Nucleotide/sugar transporter family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT1G06890.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q9m7m1|etr1_prupe : 111.0) Ethylene receptor (EC 2.7.13.3) - Prunus persica (Peach) & (reliability: 280.0) & (original description: no original description) 0.8680154896656471 53 evm.model.tig00000227.55 no hits & (original description: no original description) 0.862133772590437 34 evm.model.tig00000455.43 (at2g40540 : 132.0) putative potassium transporter AtKT2p (AtKT2) mRNA,; potassium transporter 2 (KT2); FUNCTIONS IN: potassium ion transmembrane transporter activity; INVOLVED IN: potassium ion transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Potassium uptake protein, kup (InterPro:IPR018519), K+ potassium transporter (InterPro:IPR003855); BEST Arabidopsis thaliana protein match is: Potassium transporter family protein (TAIR:AT5G14880.1); Has 3469 Blast hits to 3373 proteins in 1023 species: Archae - 13; Bacteria - 2384; Metazoa - 1; Fungi - 99; Plants - 847; Viruses - 4; Other Eukaryotes - 121 (source: NCBI BLink). & (q7xiv8|hak9_orysa : 127.0) Probable potassium transporter 9 (OsHAK9) - Oryza sativa (Rice) & (reliability: 264.0) & (original description: no original description) 0.860960459552789 36 evm.model.tig00000157.108 (at1g66340 : 109.0) Similar to prokaryote sensory transduction proteins. Contains a histidine kinase and a response regulator domain. Homodimer. Membrane component. Binds ethylene. Mutations affect ethylene binding and metabolism of other plant hormones such as auxin, cytokinins, ABA and gibberellic acid. Ethylene receptor. Has histidine kinase activity. Is regulated by RTE1.; ETHYLENE RESPONSE 1 (ETR1); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), Signal transduction histidine kinase, core (InterPro:IPR005467), Signal transduction histidine kinase, hybrid-type, ethylene sensor (InterPro:IPR014525), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), GAF (InterPro:IPR003018), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: ethylene response sensor 1 (TAIR:AT2G40940.1); Has 102721 Blast hits to 98263 proteins in 3046 species: Archae - 757; Bacteria - 90102; Metazoa - 18; Fungi - 1611; Plants - 2314; Viruses - 21; Other Eukaryotes - 7898 (source: NCBI BLink). & (o48929|etr1_tobac : 91.7) Ethylene receptor (EC 2.7.13.3) (NT-ETR1) - Nicotiana tabacum (Common tobacco) & (reliability: 199.6) & (original description: no original description) 0.8607359933758313 37 evm.model.tig00021348.25 (at3g08850 : 521.0) Encodes one of two Arabidopsis RAPTOR/KOG1 homologs. RAPTOR proteins are binding partners of the target of rapamycin kinase that is present in all eukaryotes and play a central role in the stimulation of cell growth and metabolism in response to nutrients. Mutants show embryo lethal phenotype which occurs at pre-globular stage. May interact with TOR kinase in a rapamycin like signaling pathway. Interacts with TOR and S6K1 in vivo. Overexpression of RAPTOR1 rendered the S6K1 osmotic stress insensitive.; RAPTOR1; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), WD40 repeat (InterPro:IPR001680), Regulatory associated protein of TOR (InterPro:IPR004083), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Armadillo-type fold (InterPro:IPR016024), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: HEAT repeat ;WD domain, G-beta repeat protein protein (TAIR:AT5G01770.1); Has 7799 Blast hits to 6065 proteins in 379 species: Archae - 2; Bacteria - 1590; Metazoa - 2741; Fungi - 1618; Plants - 862; Viruses - 0; Other Eukaryotes - 986 (source: NCBI BLink). & (reliability: 1012.0) & (original description: no original description) 0.8597817925125132 72 evm.model.tig00000157.121 no hits & (original description: no original description) 0.8590585449845113 40 evm.model.tig00021532.18 no hits & (original description: no original description) 0.8589810565720117 41 evm.model.tig00020943.92 no hits & (original description: no original description) 0.8586066064884003 42 evm.model.tig00000857.2 no hits & (original description: no original description) 0.8570843044445006 58 evm.model.tig00020927.37 no hits & (original description: no original description) 0.8566382877235506 83 evm.model.tig00000241.14 no hits & (original description: no original description) 0.854856437526894 46 evm.model.tig00000882.13 no hits & (original description: no original description) 0.854025709843474 50 evm.model.tig00020825.10 no hits & (original description: no original description) 0.8539793936620704 51 evm.model.tig00000093.125 no hits & (original description: no original description) 0.8538273396899455 78 evm.model.tig00021489.31 (p26969|gcsp_pea : 979.0) Glycine dehydrogenase [decarboxylating], mitochondrial precursor (EC 1.4.4.2) (Glycine decarboxylase) (Glycine cleavage system P-protein) - Pisum sativum (Garden pea) & (at4g33010 : 975.0) glycine decarboxylase P-protein 1 (GLDP1); FUNCTIONS IN: glycine dehydrogenase (decarboxylating) activity, protein binding; INVOLVED IN: glycine catabolic process, response to cadmium ion, glycine decarboxylation via glycine cleavage system; LOCATED IN: mitochondrion, apoplast, glycine cleavage complex, chloroplast; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Glycine cleavage system P-protein-like (InterPro:IPR020581), Glycine cleavage system P-protein (InterPro:IPR003437), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Glycine cleavage system P-protein, N-terminal (InterPro:IPR020580); BEST Arabidopsis thaliana protein match is: glycine decarboxylase P-protein 2 (TAIR:AT2G26080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1950.0) & (original description: no original description) 0.8526650263529972 77 evm.model.tig00021434.63 (at1g73920 : 164.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: AB-hydrolase-associated lipase region (InterPro:IPR006693); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G18460.1); Has 1707 Blast hits to 1690 proteins in 186 species: Archae - 0; Bacteria - 0; Metazoa - 1166; Fungi - 276; Plants - 162; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink). & (reliability: 328.0) & (original description: no original description) 0.852433566737907 66 evm.model.tig00000178.36 no hits & (original description: no original description) 0.8523584423533542 57 evm.model.tig00020904.93 no hits & (original description: no original description) 0.8506083782335976 59 evm.model.tig00020849.22 no hits & (original description: no original description) 0.8494483502993605 60 evm.model.tig00021318.37 no hits & (original description: no original description) 0.8488333724242497 63 evm.model.tig00000658.32 no hits & (original description: no original description) 0.8487645628003074 64 evm.model.tig00020951.54 no hits & (original description: no original description) 0.8467170072036179 68 evm.model.tig00020951.33 no hits & (original description: no original description) 0.8460266254828416 68 evm.model.tig00020571.24 no hits & (original description: no original description) 0.845991814584294 100 evm.model.tig00021680.24 no hits & (original description: no original description) 0.8457295285776703 71 evm.model.tig00000792.10 no hits & (original description: no original description) 0.8456718147610165 72 evm.model.tig00000237.19 no hits & (original description: no original description) 0.8438685109966702 83 evm.model.tig00000806.13 (at5g23630 : 453.0) A member of the eukaryotic type V subfamily (P5) of P-type ATPase cation pumps; MIA is most similar to the human P5 ATPase ATY2(44% identity) and to Spf1p from S. cerevisiae (41% identity). Highly abundant in the endoplasmic reticulum and small vesicles of developing pollen grains and tapetum cells. T-DNA insertional mutants of MIA suffer from imbalances in cation homeostasis and exhibit a severe reduction in fertility. Mutant microspores fail to separate from tetrads and pollen grains are fragile with an abnormal morphology and altered cell wall structure. MIA is also named PDR2 and was shown to be required for proper expression of SCARECROW (SCR), a key regulator of root patterning, and for stem-cell maintenance in Pi-deprived roots.; phosphate deficiency response 2 (PDR2); FUNCTIONS IN: cation-transporting ATPase activity; INVOLVED IN: in 6 processes; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, unknown pump specificity (type V) (InterPro:IPR006544), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: calcium ATPase 2 (TAIR:AT4G37640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 906.0) & (original description: no original description) 0.8436141960505823 77 evm.model.tig00020878.26 (at5g56510 : 284.0) Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts.; pumilio 12 (PUM12); FUNCTIONS IN: RNA binding, binding; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pumilio RNA-binding repeat (InterPro:IPR001313), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: pumilio 7 (TAIR:AT1G78160.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 568.0) & (original description: no original description) 0.8435447243519097 78 evm.model.tig00000430.45 no hits & (original description: no original description) 0.8428387244113911 80 evm.model.tig00000140.9 no hits & (original description: no original description) 0.8418879145725472 83 evm.model.tig00000079.5 no hits & (original description: no original description) 0.8418129902675303 84 evm.model.tig00020553.291 no hits & (original description: no original description) 0.8406757978479764 88 evm.model.tig00000663.72 no hits & (original description: no original description) 0.840274216024232 89 evm.model.tig00001206.23 no hits & (original description: no original description) 0.8398138103203013 90 evm.model.tig00001384.8 no hits & (original description: no original description) 0.8396052693711193 91 evm.model.tig00001335.8 no hits & (original description: no original description) 0.8380295094313674 93 evm.model.tig00020531.12 no hits & (original description: no original description) 0.8374101166592948 95 evm.model.tig00020592.28 no hits & (original description: no original description) 0.8372834005441593 96