Sequence Description Alias PCC hrr evm.model.tig00021127.51 no hits & (original description: no original description) 0.8801805083303589 4 evm.model.tig00020556.44 (at3g27710 : 223.0) ARIADNE 3 (ARI3); FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, C6HC-type (InterPro:IPR002867), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G34370.1); Has 3131 Blast hits to 3105 proteins in 234 species: Archae - 0; Bacteria - 4; Metazoa - 1303; Fungi - 627; Plants - 676; Viruses - 17; Other Eukaryotes - 504 (source: NCBI BLink). & (reliability: 446.0) & (original description: no original description) 0.8721319824177869 4 evm.model.tig00000555.14 no hits & (original description: no original description) 0.8716537506541444 3 evm.model.tig00000093.155 no hits & (original description: no original description) 0.8693308986964063 4 evm.model.tig00000076.110 no hits & (original description: no original description) 0.8691878732485575 25 evm.model.tig00020704.22 no hits & (original description: no original description) 0.8652629658503898 46 evm.model.tig00021179.67 (at4g06599 : 198.0) ubiquitin family protein; FUNCTIONS IN: phosphoprotein phosphatase activity; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), HAD-superfamily hydrolase, subfamily IIID (InterPro:IPR011943), NLI interacting factor (InterPro:IPR004274); Has 390 Blast hits to 384 proteins in 126 species: Archae - 0; Bacteria - 8; Metazoa - 131; Fungi - 51; Plants - 106; Viruses - 7; Other Eukaryotes - 87 (source: NCBI BLink). & (reliability: 396.0) & (original description: no original description) 0.8554423468592878 29 evm.model.tig00001376.15 no hits & (original description: no original description) 0.8393115716511994 13 evm.model.tig00000203.22 (at3g59890 : 225.0) Dihydrodipicolinate reductase, bacterial/plant; FUNCTIONS IN: dihydrodipicolinate reductase activity; INVOLVED IN: oxidation reduction, lysine biosynthetic process via diaminopimelate, diaminopimelate biosynthetic process, metabolic process; LOCATED IN: chloroplast, cytoplasm; CONTAINS InterPro DOMAIN/s: Dihydrodipicolinate reductase, C-terminal (InterPro:IPR022663), NAD(P)-binding domain (InterPro:IPR016040), Dihydrodipicolinate reductase, plant (InterPro:IPR011859), Dihydrodipicolinate reductase, bacterial/plant (InterPro:IPR011770), Dihydrodipicolinate reductase, N-terminal (InterPro:IPR000846); BEST Arabidopsis thaliana protein match is: Dihydrodipicolinate reductase, bacterial/plant (TAIR:AT2G44040.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 450.0) & (original description: no original description) 0.8387769415906015 71 evm.model.tig00020515.13 no hits & (original description: no original description) 0.8330410808282898 10 evm.model.tig00000718.74 no hits & (original description: no original description) 0.8297068711325772 11 evm.model.tig00000663.50 no hits & (original description: no original description) 0.8287741514650964 43 evm.model.tig00000545.20 no hits & (original description: no original description) 0.8226670921320748 40 evm.model.tig00020780.34 no hits & (original description: no original description) 0.8226379873346524 18 evm.model.tig00020554.72 (at1g17730 : 137.0) Encodes an ESCRT-related protein: CHMP1A/AT1G73030; CHMP1B/AT1G17730. CHMP1A and B mediate multivesicular body sorting of auxin carriers and are required for plant development. ESCRT: Endosomal Sorting Complexes Required For Transport machinery; CHMP: Charged Multivesicular Body Protein/Chromatin Modifying Protein.; vacuolar protein sorting 46.1 (VPS46.1); CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: SNF7 family protein (TAIR:AT1G73030.1); Has 1319 Blast hits to 1319 proteins in 225 species: Archae - 2; Bacteria - 0; Metazoa - 503; Fungi - 283; Plants - 343; Viruses - 0; Other Eukaryotes - 188 (source: NCBI BLink). & (reliability: 274.0) & (original description: no original description) 0.8202727188071991 32 evm.model.tig00020553.29 no hits & (original description: no original description) 0.8191822039956448 17 evm.model.tig00020918.1 (at5g37290 : 82.4) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 164.8) & (original description: no original description) 0.8190895626732797 39 evm.model.tig00000042.147 no hits & (original description: no original description) 0.8182486106702767 75 evm.model.tig00000178.22 no hits & (original description: no original description) 0.8173947849326642 47 evm.model.tig00020675.59 no hits & (original description: no original description) 0.8119426196502375 22 evm.model.tig00020553.230 no hits & (original description: no original description) 0.8092392477254314 25 evm.model.tig00020703.8 (at1g70660 : 112.0) MMZ2/UEV1B encodes a protein that may play a role in DNA damage responses and error-free post-replicative DNA repair by participating in lysine-63-based polyubiquitination reactions. UEV1A can form diubiquitin and triubiquitin chains in combination with UBC13A/UBC35 in vitro. It can also functionally complement an mms2 mutation in budding yeast, both by increasing mms2 mutant viability in the presence of the DNA damaging agent MMS, and by reducing the rate of spontaneous DNA mutation. However, a combination of MMZ2/UEV1B and UBC13A do not do a good job of rescuing an mms2 ubc13 double mutant in yeast. MMZ2/UEV1B transcripts are found in most plant organs, but not in the pollen or in seedlings 6 hours or 2 days post-germination. The transcript levels do not appear to be stress-inducible.; MMS ZWEI homologue 2 (MMZ2); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-like superfamily protein (TAIR:AT1G70650.2). & (reliability: 218.0) & (original description: no original description) 0.8078748844606504 27 evm.model.tig00020553.160 no hits & (original description: no original description) 0.806642842509007 55 evm.model.tig00020961.101 (at5g58030 : 219.0) Transport protein particle (TRAPP) component; CONTAINS InterPro DOMAIN/s: Transport protein particle (TRAPP) component (InterPro:IPR007194), TRAPP I complex, Trs31 (InterPro:IPR016696); Has 560 Blast hits to 545 proteins in 219 species: Archae - 0; Bacteria - 0; Metazoa - 199; Fungi - 199; Plants - 63; Viruses - 0; Other Eukaryotes - 99 (source: NCBI BLink). & (reliability: 438.0) & (original description: no original description) 0.8065130243716189 76 evm.model.tig00001628.4 no hits & (original description: no original description) 0.805761453129231 31 evm.model.tig00020902.52 no hits & (original description: no original description) 0.8056514327070469 32 evm.model.tig00000711.34 no hits & (original description: no original description) 0.803005847998343 35 evm.model.tig00000331.7 no hits & (original description: no original description) 0.8021845605315879 87 evm.model.tig00001215.17 no hits & (original description: no original description) 0.8008288095344895 39 evm.model.tig00000449.9 no hits & (original description: no original description) 0.8001661313571751 40 evm.model.tig00000711.29 no hits & (original description: no original description) 0.797881654508561 41 evm.model.tig00020918.2 (at5g61150 : 95.5) Encodes highly hydrophilic protein involved in positively regulating FLC expression. Mutants are early flowering and show a loss of FLC expression in the absence of cold.; VERNALIZATION INDEPENDENCE 4 (VIP4); INVOLVED IN: negative regulation of flower development, vernalization response; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leo1-like protein (InterPro:IPR007149); Has 69096 Blast hits to 31991 proteins in 1682 species: Archae - 184; Bacteria - 8816; Metazoa - 27909; Fungi - 8257; Plants - 3470; Viruses - 882; Other Eukaryotes - 19578 (source: NCBI BLink). & (reliability: 191.0) & (original description: no original description) 0.7963934931811494 51 evm.model.tig00000248.22 no hits & (original description: no original description) 0.7960753346687894 43 evm.model.tig00000248.65 (at1g25682 : 230.0) Family of unknown function (DUF572) ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cotyledon; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF572 (InterPro:IPR007590); BEST Arabidopsis thaliana protein match is: Family of unknown function (DUF572) (TAIR:AT1G25988.1); Has 717 Blast hits to 715 proteins in 213 species: Archae - 0; Bacteria - 6; Metazoa - 235; Fungi - 232; Plants - 115; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (reliability: 460.0) & (original description: no original description) 0.7959263683785879 44 evm.model.tig00020713.12 no hits & (original description: no original description) 0.794795691902049 46 evm.model.tig00020601.11 no hits & (original description: no original description) 0.7928817140657903 47 evm.model.tig00000630.12 no hits & (original description: no original description) 0.7925321771059043 95 evm.model.tig00021433.26 (at2g26430 : 218.0) Encodes an ania-6a type arginine-rich cyclin which confers tolerance to LiCl and NaCl when expressed in yeast.; arginine-rich cyclin 1 (RCY1); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: response to salt stress, regulation of cell cycle, regulation of transcription; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin L (InterPro:IPR017060), Cyclin-like (InterPro:IPR011028), Transcription regulator cyclin (InterPro:IPR015429), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin family protein (TAIR:AT5G45190.1); Has 13929 Blast hits to 7818 proteins in 361 species: Archae - 16; Bacteria - 504; Metazoa - 7801; Fungi - 1963; Plants - 1370; Viruses - 16; Other Eukaryotes - 2259 (source: NCBI BLink). & (reliability: 436.0) & (original description: no original description) 0.7917634316062848 95 evm.model.tig00021352.50 (at3g28430 : 152.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function FPL (InterPro:IPR019155); Has 243 Blast hits to 233 proteins in 101 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 304.0) & (original description: no original description) 0.7798354982236273 51 evm.model.tig00020875.20 no hits & (original description: no original description) 0.7784365737282719 53 evm.model.tig00020904.49 (at5g13120 : 180.0) Encodes a lumenal cyclophilin with peptidyl-prolyl isomerase activity that is associated with the NAD(P)H dehydrogenase complex in stromal regions of the thylakoid membrane. It is likely to be important for the accumulation of the hydrophobic domain of the NAD(P)H dehydrogenase complex. This complex is associated with PSI and is responsible for the reduction of plastoquinone.; cyclophilin 20-2 (CYP20-2); CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892); BEST Arabidopsis thaliana protein match is: rotamase CYP 4 (TAIR:AT3G62030.1). & (q41651|cypb_vicfa : 179.0) Peptidyl-prolyl cis-trans isomerase, chloroplast precursor (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) (CYP B) - Vicia faba (Broad bean) & (reliability: 360.0) & (original description: no original description) 0.7776264410000016 88 evm.model.tig00001027.11 no hits & (original description: no original description) 0.7758327165779024 57 evm.model.tig00000269.82 no hits & (original description: no original description) 0.774489087397506 59 evm.model.tig00021312.2 no hits & (original description: no original description) 0.7733211337780226 61 evm.model.tig00000339.12 no hits & (original description: no original description) 0.7729280732979659 62 evm.model.tig00000949.12 no hits & (original description: no original description) 0.771904047681922 64 evm.model.tig00000912.35 no hits & (original description: no original description) 0.7693817524068923 67 evm.model.tig00000882.38 no hits & (original description: no original description) 0.7687253717410224 69 evm.model.tig00021108.41 (at1g62040 : 160.0) autophagy 8c (ATG8C); FUNCTIONS IN: microtubule binding; INVOLVED IN: autophagy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Light chain 3 (LC3) (InterPro:IPR004241); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT4G21980.2). & (reliability: 320.0) & (original description: no original description) 0.768676520959464 70 evm.model.tig00000796.9 no hits & (original description: no original description) 0.7684015787744768 71 evm.model.tig00000767.14 no hits & (original description: no original description) 0.7653883719322272 79 evm.model.tig00001373.12 no hits & (original description: no original description) 0.7640764425643267 81 evm.model.tig00021073.9 no hits & (original description: no original description) 0.7609662825500764 83 evm.model.tig00000865.35 no hits & (original description: no original description) 0.7593945436066193 87 evm.model.tig00000882.14 no hits & (original description: no original description) 0.7590115248699097 100 evm.model.tig00000788.4 no hits & (original description: no original description) 0.7580123884222956 93 evm.model.tig00021238.19 no hits & (original description: no original description) 0.7570189733305448 95 evm.model.tig00000310.69 no hits & (original description: no original description) 0.7557489666150746 97