Sequence Description Alias PCC hrr evm.model.tig00000624.18 no hits & (original description: no original description) 0.9162406927407372 15 evm.model.tig00000981.12 no hits & (original description: no original description) 0.9069440592064515 15 evm.model.tig00020537.42 (at5g05660 : 217.0) Encodes a homolog of the mammalian zinc finger transcription factor NF-X1.; ATNFXL2; FUNCTIONS IN: zinc ion binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, NF-X1-type (InterPro:IPR000967), Zinc finger, PHD-type, conserved site (InterPro:IPR019786); BEST Arabidopsis thaliana protein match is: NF-X-like 1 (TAIR:AT1G10170.1); Has 10412 Blast hits to 5299 proteins in 265 species: Archae - 4; Bacteria - 94; Metazoa - 8397; Fungi - 425; Plants - 250; Viruses - 11; Other Eukaryotes - 1231 (source: NCBI BLink). & (reliability: 434.0) & (original description: no original description) 0.9035347296060339 15 evm.model.tig00000912.37 no hits & (original description: no original description) 0.9024960462430495 59 evm.model.tig00020892.16 no hits & (original description: no original description) 0.9024942511387302 19 evm.model.tig00021795.4 no hits & (original description: no original description) 0.9002471223319799 6 evm.model.tig00001056.10 no hits & (original description: no original description) 0.8993553084433739 9 evm.model.tig00001126.3 (at5g44740 : 95.1) Y-family DNA polymerase. Catalyses translesion synthesis in response to UV damage. Functionally interacts with PCNA2. Has a ubiquitin binding motif.; Y-family DNA polymerase H (POLH); CONTAINS InterPro DOMAIN/s: DNA polymerase eta (InterPro:IPR017061), DNA-repair protein, UmuC-like (InterPro:IPR001126), DNA-repair protein, UmuC-like, N-terminal (InterPro:IPR017963); BEST Arabidopsis thaliana protein match is: DNA-directed DNA polymerases (TAIR:AT5G44750.1); Has 8088 Blast hits to 8015 proteins in 2292 species: Archae - 210; Bacteria - 5635; Metazoa - 500; Fungi - 401; Plants - 163; Viruses - 3; Other Eukaryotes - 1176 (source: NCBI BLink). & (reliability: 190.2) & (original description: no original description) 0.8945417458379068 16 evm.model.tig00020563.166 no hits & (original description: no original description) 0.8940412216014174 18 evm.model.tig00020961.140 no hits & (original description: no original description) 0.8901546300167346 79 evm.model.tig00000821.37 (at3g06720 : 85.5) Encodes importin alpha involved in nuclear import.; AT-IMP; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus; LOCATED IN: cytosol, nuclear envelope, nucleolus, cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Importin-alpha-like, importin-beta-binding domain (InterPro:IPR002652), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: importin alpha isoform 2 (TAIR:AT4G16143.2); Has 4059 Blast hits to 2974 proteins in 281 species: Archae - 4; Bacteria - 22; Metazoa - 1537; Fungi - 665; Plants - 1109; Viruses - 0; Other Eukaryotes - 722 (source: NCBI BLink). & (reliability: 171.0) & (original description: no original description) 0.8879806149815669 68 evm.model.tig00021037.66 no hits & (original description: no original description) 0.8879198951340564 14 evm.model.tig00000383.103 no hits & (original description: no original description) 0.8835781576332555 50 evm.model.tig00000767.4 no hits & (original description: no original description) 0.8826389164159126 53 evm.model.tig00021537.42 no hits & (original description: no original description) 0.882565936412227 74 evm.model.tig00021569.15 no hits & (original description: no original description) 0.8817069530577301 69 evm.model.tig00021719.15 no hits & (original description: no original description) 0.8816188888757645 81 evm.model.tig00000145.11 no hits & (original description: no original description) 0.8787309133416249 71 evm.model.tig00000711.20 no hits & (original description: no original description) 0.8783832559545873 91 evm.model.tig00000741.29 (at1g01040 : 82.8) Encodes a Dicer homolog. Dicer is a RNA helicase involved in microRNA processing. Mutations in this locus can result in embryo lethality. Embryo shape at seed maturity is globular-elongate. Other mutants convert the floral meristems to an indeterminate state, others yet show defects in ovule development. mRNA is expressed in all shoot tissues. DCL1 is able to produce miRNAs and siRNAs.; dicer-like 1 (DCL1); CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), Double-stranded RNA-binding (InterPro:IPR001159), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Ribonuclease III (InterPro:IPR000999), Double-stranded RNA-binding-like (InterPro:IPR014720), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Dicer double-stranded RNA-binding fold (InterPro:IPR005034), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: dicer-like 3 (TAIR:AT3G43920.1). & (reliability: 165.6) & (original description: no original description) 0.8748958872306251 70 evm.model.tig00020878.16 no hits & (original description: no original description) 0.8722785099524948 40 evm.model.tig00001181.33 no hits & (original description: no original description) 0.8700789899737221 37 evm.model.tig00000629.3 (at4g16710 : 130.0) glycosyltransferase family protein 28; FUNCTIONS IN: carbohydrate binding, transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: lipid glycosylation, biosynthetic process, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 28, C-terminal (InterPro:IPR007235); Has 643 Blast hits to 638 proteins in 315 species: Archae - 10; Bacteria - 244; Metazoa - 125; Fungi - 122; Plants - 50; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink). & (reliability: 260.0) & (original description: no original description) 0.8692892246234217 38 evm.model.tig00020710.15 no hits & (original description: no original description) 0.86716840514714 41 evm.model.tig00020610.99 no hits & (original description: no original description) 0.8669436251696783 75 evm.model.tig00000605.6 no hits & (original description: no original description) 0.8659673265151148 45 evm.model.tig00001007.13 no hits & (original description: no original description) 0.8642743112036255 58 evm.model.tig00000076.112 no hits & (original description: no original description) 0.8633482387315965 67 evm.model.tig00021037.54 no hits & (original description: no original description) 0.8620376038593723 75 evm.model.tig00021348.19 (at2g31870 : 129.0) mutant has Long free-running circadian period; Poly (ADP-ribose) Glycohydrolase; Sanskrit for 'bright' (TEJ); CONTAINS InterPro DOMAIN/s: Poly(ADP-ribose) glycohydrolase (InterPro:IPR007724); BEST Arabidopsis thaliana protein match is: poly(ADP-ribose) glycohydrolase 2 (TAIR:AT2G31865.2); Has 549 Blast hits to 374 proteins in 97 species: Archae - 0; Bacteria - 0; Metazoa - 324; Fungi - 12; Plants - 58; Viruses - 0; Other Eukaryotes - 155 (source: NCBI BLink). & (reliability: 258.0) & (original description: no original description) 0.8584823486514985 64 evm.model.tig00000073.4 (at4g24880 : 199.0) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 398.0) & (original description: no original description) 0.858360217535772 65 evm.model.tig00021617.24 no hits & (original description: no original description) 0.8578690901874366 67 evm.model.tig00020603.91 no hits & (original description: no original description) 0.8555006274696554 73 evm.model.tig00020616.31 no hits & (original description: no original description) 0.8531775397651561 77 evm.model.tig00000248.43 no hits & (original description: no original description) 0.8523729999293127 80 evm.model.tig00020510.136 no hits & (original description: no original description) 0.8522962544910219 81 evm.model.tig00001056.26 no hits & (original description: no original description) 0.850646871107323 84 evm.model.tig00000489.1 (at1g08600 : 85.9) ATRX; FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: homolog of RAD54 (TAIR:AT3G19210.1). & (reliability: 171.8) & (original description: no original description) 0.8503154033227549 86 evm.model.tig00000144.57 no hits & (original description: no original description) 0.848393948973192 93 evm.model.tig00001718.3 (at5g57160 : 184.0) Encodes the Arabidopsis orthologue of the yeast and mammalian DNA ligase IV. Involved in the repair of DNA damage but, unlike in yeast, not required for T-DNA integration. Interacts with the Arabidopsis homologue of XRCC4.; ATLIG4; FUNCTIONS IN: protein binding, DNA ligase (ATP) activity; INVOLVED IN: double-strand break repair, response to X-ray, response to DNA damage stimulus; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA ligase, N-terminal (InterPro:IPR012308), ATP dependent DNA ligase, central (InterPro:IPR012310), ATP dependent DNA ligase, C-terminal (InterPro:IPR012309), ATP-dependent DNA ligase, conserved site (InterPro:IPR016059), ATP-dependent DNA ligase (InterPro:IPR000977), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: DNA ligase 1 (TAIR:AT1G08130.1); Has 7656 Blast hits to 6618 proteins in 1076 species: Archae - 317; Bacteria - 1869; Metazoa - 2250; Fungi - 907; Plants - 304; Viruses - 214; Other Eukaryotes - 1795 (source: NCBI BLink). & (q7x7e9|dnl4_orysa : 96.7) Putative DNA ligase 4 (EC 6.5.1.1) (DNA ligase IV) (Polydeoxyribonucleotide synthase [ATP] 4) - Oryza sativa (Rice) & (reliability: 368.0) & (original description: no original description) 0.84838810657545 94 evm.model.tig00021037.5 no hits & (original description: no original description) 0.8467079496915084 97 evm.model.tig00020557.2 no hits & (original description: no original description) 0.8457993740449146 99