Sequence Description Alias PCC hrr evm.model.tig00000241.69 (at3g59520 : 206.0) RHOMBOID-like protein 13 (RBL13); BEST Arabidopsis thaliana protein match is: RHOMBOID-like protein 15 (TAIR:AT3G58460.2); Has 1791 Blast hits to 1791 proteins in 774 species: Archae - 24; Bacteria - 1315; Metazoa - 107; Fungi - 76; Plants - 130; Viruses - 0; Other Eukaryotes - 139 (source: NCBI BLink). & (reliability: 412.0) & (original description: no original description) 0.9599149654763839 2 evm.model.tig00000093.247 no hits & (original description: no original description) 0.9582384052396309 4 evm.model.tig00000498.31 (at5g17850 : 82.8) Sodium/calcium exchanger family protein; FUNCTIONS IN: cation:cation antiporter activity, calcium:sodium antiporter activity; INVOLVED IN: cation transport, transmembrane transport; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Sodium/calcium exchanger membrane region (InterPro:IPR004837); BEST Arabidopsis thaliana protein match is: calcium exchanger 7 (TAIR:AT5G17860.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 165.6) & (original description: no original description) 0.9580720946329344 3 evm.model.tig00020780.30 no hits & (original description: no original description) 0.9513683933649564 4 evm.model.tig00021537.33 no hits & (original description: no original description) 0.9480027617411084 5 evm.model.tig00021680.28 no hits & (original description: no original description) 0.9474268644574054 6 evm.model.tig00020961.18 no hits & (original description: no original description) 0.9466042940114922 11 evm.model.tig00021015.11 no hits & (original description: no original description) 0.9454323559995753 8 evm.model.tig00000870.4 (at5g07910 : 95.9) Leucine-rich repeat (LRR) family protein; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30105.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 184.8) & (original description: no original description) 0.944629256295925 13 evm.model.tig00001067.21 no hits & (original description: no original description) 0.9438428516760857 10 evm.model.tig00020499.1 no hits & (original description: no original description) 0.9406605657936162 11 evm.model.tig00001042.24 no hits & (original description: no original description) 0.9401054702621408 12 evm.model.tig00000317.16 no hits & (original description: no original description) 0.9388234675634224 16 evm.model.tig00000254.42 no hits & (original description: no original description) 0.938657871844837 14 evm.model.tig00000507.24 no hits & (original description: no original description) 0.9375652351938285 15 evm.model.tig00000169.2 no hits & (original description: no original description) 0.937287779734226 16 evm.model.tig00021428.6 no hits & (original description: no original description) 0.9365558925010219 17 evm.model.tig00000459.30 no hits & (original description: no original description) 0.9365054979172889 18 evm.model.tig00020563.153 no hits & (original description: no original description) 0.9363097120902625 34 evm.model.tig00020848.40 no hits & (original description: no original description) 0.9356194959615581 20 evm.model.tig00020553.187 no hits & (original description: no original description) 0.9343847937206222 21 evm.model.tig00001164.18 no hits & (original description: no original description) 0.9331328509624225 63 evm.model.tig00000157.72 no hits & (original description: no original description) 0.932572446770014 23 evm.model.tig00020610.74 no hits & (original description: no original description) 0.9322954903371934 24 evm.model.tig00000808.45 no hits & (original description: no original description) 0.9316776948929744 25 evm.model.tig00001486.4 no hits & (original description: no original description) 0.9316390973220814 26 evm.model.tig00001056.17 (at2g32040 : 203.0) The At2g32040 gene product has been demonstrated to mediate folate monoglutamate transport involved in tetrahydrofolate biosynthesis. It also mediates transport of antifolates, such as methotrexate and aminopterin. The gene is expressed in both chloroplast and non-green plastids.; Major facilitator superfamily protein; FUNCTIONS IN: folic acid transporter activity, 5-formyltetrahydrofolate transporter activity, transporter activity; INVOLVED IN: transport; LOCATED IN: membrane, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily, general substrate transporter (InterPro:IPR016196), Biopterin transport-related protein BT1 (InterPro:IPR004324); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G25050.1); Has 2017 Blast hits to 1915 proteins in 421 species: Archae - 4; Bacteria - 671; Metazoa - 3; Fungi - 33; Plants - 272; Viruses - 0; Other Eukaryotes - 1034 (source: NCBI BLink). & (reliability: 406.0) & (original description: no original description) 0.9316381734961703 27 evm.model.tig00000808.3 no hits & (original description: no original description) 0.930850047215739 28 evm.model.tig00000037.23 (at1g17980 : 181.0) Encodes a poly(A) polymerase. Located in the nucleus.; poly(A) polymerase 1 (PAPS1); CONTAINS InterPro DOMAIN/s: Poly(A) polymerase (InterPro:IPR014492), Poly(A) polymerase, central domain (InterPro:IPR007012), Nucleotidyltransferase, class I, C-terminal-like (InterPro:IPR011068), Poly(A) polymerase, RNA-binding domain (InterPro:IPR007010); BEST Arabidopsis thaliana protein match is: poly(A) polymerase 2 (TAIR:AT2G25850.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 362.0) & (original description: no original description) 0.9291259092231955 29 evm.model.tig00020614.33 (at1g60995 : 165.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Membralin (InterPro:IPR019144); Has 172 Blast hits to 170 proteins in 70 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (reliability: 330.0) & (original description: no original description) 0.9277624903757663 30 evm.model.tig00000076.5 (at3g02850 : 138.0) Encodes SKOR, a member of Shaker family potassium ion (K+) channel. This family includes five groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inward rectifying channel): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500). Mediates the delivery of K+ from stelar cells to the xylem in the roots towards the shoot. mRNA accumulation is modulated by abscisic acid. K+ gating activity is modulated by external and internal K+.; STELAR K+ outward rectifier (SKOR); FUNCTIONS IN: outward rectifier potassium channel activity, cyclic nucleotide binding; INVOLVED IN: potassium ion transport, response to abscisic acid stimulus; LOCATED IN: membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Potassium channel, voltage-dependent, EAG/ELK/ERG (InterPro:IPR003938), Protein of unknown function DUF3354 (InterPro:IPR021789), Ankyrin repeat-containing domain (InterPro:IPR020683), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: gated outwardly-rectifying K+ channel (TAIR:AT5G37500.1); Has 82938 Blast hits to 34972 proteins in 1815 species: Archae - 147; Bacteria - 10317; Metazoa - 39460; Fungi - 7131; Plants - 3765; Viruses - 1138; Other Eukaryotes - 20980 (source: NCBI BLink). & (q8vyx2|akt1_orysa : 118.0) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (reliability: 276.0) & (original description: no original description) 0.9263712809066255 43 evm.model.tig00020684.19 no hits & (original description: no original description) 0.9253430942735772 32 evm.model.tig00020554.94 no hits & (original description: no original description) 0.9253260776199558 33 evm.model.tig00000950.9 no hits & (original description: no original description) 0.9252526196421083 34 evm.model.tig00001029.20 (at4g22260 : 135.0) Similar to mitochondrial alternative oxidase. im mutants have a variegated phenotype and fail to differentiate chloroplasts in the majority of their cells under high light intensity continuous illumination. The white tissues of immutans accumulate phytoene, a non-colored C40 carotenoid intermediate. This suggests that immutans controls, either directly or indirectly, the activity of phytoene desaturase (PDS), the enzyme that converts phytoene to zeta-carotene in higher plants. However, im is not the structural gene for PDS. It is located in the lumenar face of the thylakoid membrane. IM is expressed ubiquitously in plant tissues.; IMMUTANS (IM); CONTAINS InterPro DOMAIN/s: Alternative oxidase (InterPro:IPR002680); BEST Arabidopsis thaliana protein match is: alternative oxidase 2 (TAIR:AT5G64210.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 270.0) & (original description: no original description) 0.9249652773017865 35 evm.model.tig00000841.6 (at2g17440 : 130.0) Encodes PIRL5, a member of the Plant Intracellular Ras-group-related LRRs (Leucine rich repeat proteins). PIRLs are a distinct, plant-specific class of intracellular LRRs that likely mediate protein interactions, possibly in the context of signal transduction.; plant intracellular ras group-related LRR 5 (PIRL5); LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: plant intracellular ras group-related LRR 4 (TAIR:AT4G35470.1); Has 100264 Blast hits to 38283 proteins in 1358 species: Archae - 22; Bacteria - 10106; Metazoa - 37622; Fungi - 3439; Plants - 42778; Viruses - 28; Other Eukaryotes - 6269 (source: NCBI BLink). & (p93194|rpk1_iponi : 94.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 242.0) & (original description: no original description) 0.9245168127009856 36 evm.model.tig00001071.10 no hits & (original description: no original description) 0.9244990437549361 61 evm.model.tig00000388.19 no hits & (original description: no original description) 0.9238092429168343 38 evm.model.tig00000981.8 no hits & (original description: no original description) 0.923717995769183 39 evm.model.tig00020902.12 no hits & (original description: no original description) 0.9233071771624374 40 evm.model.tig00000600.21 no hits & (original description: no original description) 0.9230533229306416 41 evm.model.tig00001098.18 no hits & (original description: no original description) 0.9229549312827309 42 evm.model.tig00020556.7 (original description: no original description) 0.9215504008364604 43 evm.model.tig00020629.109 no hits & (original description: no original description) 0.9213683280850865 44 evm.model.tig00021432.17 (at3g52640 : 114.0) Zn-dependent exopeptidases superfamily protein; INVOLVED IN: protein processing; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nicastrin (InterPro:IPR008710); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 228.0) & (original description: no original description) 0.9192211370975178 45 evm.model.tig00021348.7 no hits & (original description: no original description) 0.9189693215651824 46 evm.model.tig00000093.157 no hits & (original description: no original description) 0.9184801050486289 47 evm.model.tig00021462.25 no hits & (original description: no original description) 0.9184326129886559 59 evm.model.tig00001376.22 no hits & (original description: no original description) 0.918218343868156 49 evm.model.tig00020629.70 no hits & (original description: no original description) 0.918123491175083 50 evm.model.tig00000241.8 no hits & (original description: no original description) 0.9179978853067564 83 evm.model.tig00001128.2 (at4g25350 : 168.0) SHB1 encodes a nuclear and cytosolic protein that has motifs homologous with SYG1 protein family members. Acts in cryptochrome signaling. Overexpression of SHB1 enhanced the expression of PHYTOCHROME-INTERACTING FACTOR4 (PIF4) under red light and promoted proteasome-mediated degradation of phytochrome A and hypocotyl elongation under far-red light. A knockout allele suppressed LONG HYPOCOTYL IN FAR-RED LIGHT1 (HFR1) expression and showed several deetiolation phenotypes. Acts upstream of HFR1. Regulates seed development.; SHORT HYPOCOTYL UNDER BLUE1 (SHB1); CONTAINS InterPro DOMAIN/s: EXS, C-terminal (InterPro:IPR004342), SPX, N-terminal (InterPro:IPR004331); BEST Arabidopsis thaliana protein match is: EXS (ERD1/XPR1/SYG1) family protein (TAIR:AT1G35350.1); Has 1169 Blast hits to 1111 proteins in 205 species: Archae - 2; Bacteria - 6; Metazoa - 265; Fungi - 425; Plants - 309; Viruses - 0; Other Eukaryotes - 162 (source: NCBI BLink). & (reliability: 336.0) & (original description: no original description) 0.9174942998340614 52 evm.model.tig00020610.48 no hits & (original description: no original description) 0.9174791473522907 53 evm.model.tig00000402.28 no hits & (original description: no original description) 0.9174184045609558 54 evm.model.tig00020537.30 (at4g03020 : 211.0) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat (InterPro:IPR001680), WD repeat protein 23 (InterPro:IPR017399), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G43770.1). & (reliability: 422.0) & (original description: no original description) 0.917232426905661 55 evm.model.tig00001215.10 no hits & (original description: no original description) 0.9168673805302239 56 evm.model.tig00000042.69 no hits & (original description: no original description) 0.916722311511075 67 evm.model.tig00020848.79 no hits & (original description: no original description) 0.9165829518005915 58 evm.model.tig00020603.38 (at2g47900 : 117.0) Member of TLP family; tubby like protein 3 (TLP3); FUNCTIONS IN: phosphoric diester hydrolase activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Tubby, C-terminal (InterPro:IPR000007); BEST Arabidopsis thaliana protein match is: tubby-like protein 9 (TAIR:AT3G06380.1). & (reliability: 234.0) & (original description: no original description) 0.9165097205636098 59 evm.model.tig00020904.135 (at5g14850 : 85.5) Alg9-like mannosyltransferase family; FUNCTIONS IN: mannosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: GPI anchor biosynthetic process, GPI anchor metabolic process; LOCATED IN: endoplasmic reticulum membrane, intrinsic to endoplasmic reticulum membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Alg9-like mannosyltransferase (InterPro:IPR005599); Has 1101 Blast hits to 1081 proteins in 222 species: Archae - 0; Bacteria - 46; Metazoa - 380; Fungi - 409; Plants - 121; Viruses - 0; Other Eukaryotes - 145 (source: NCBI BLink). & (reliability: 171.0) & (original description: no original description) 0.9164134849917743 65 evm.model.tig00021290.6 no hits & (original description: no original description) 0.9158201910874696 61 evm.model.tig00000475.14 no hits & (original description: no original description) 0.9156319425952058 62 evm.model.tig00000367.12 (at5g20270 : 195.0) heptahelical transmembrane protein homologous to human adiponectin receptors and progestin receptors; heptahelical transmembrane protein1 (HHP1); FUNCTIONS IN: receptor activity; INVOLVED IN: response to salt stress, response to hormone stimulus, response to sucrose stimulus; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Hly-III related (InterPro:IPR004254); BEST Arabidopsis thaliana protein match is: heptahelical transmembrane protein2 (TAIR:AT4G30850.2); Has 2727 Blast hits to 2656 proteins in 794 species: Archae - 0; Bacteria - 1143; Metazoa - 823; Fungi - 356; Plants - 236; Viruses - 0; Other Eukaryotes - 169 (source: NCBI BLink). & (reliability: 390.0) & (original description: no original description) 0.9153563246280347 63 evm.model.tig00000403.88 no hits & (original description: no original description) 0.9151375108311373 64 evm.model.tig00000204.54 no hits & (original description: no original description) 0.9146211524796015 65 evm.model.tig00021276.9 no hits & (original description: no original description) 0.9135822340848626 66 evm.model.tig00000769.11 no hits & (original description: no original description) 0.9132450264151472 67 evm.model.tig00000248.36 no hits & (original description: no original description) 0.9126809337950265 68 evm.model.tig00001007.5 no hits & (original description: no original description) 0.9121098865797421 70 evm.model.tig00020693.7 (at2g31440 : 138.0) INVOLVED IN: positive regulation of catalytic activity, protein processing; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aph-1 (InterPro:IPR009294); Has 268 Blast hits to 262 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 212; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (reliability: 276.0) & (original description: no original description) 0.9119979431370522 71 evm.model.tig00000615.29 no hits & (original description: no original description) 0.9117701979058386 72 evm.model.tig00000448.75 no hits & (original description: no original description) 0.9117545080629237 73 evm.model.tig00021795.11 no hits & (original description: no original description) 0.9116008404935905 74 evm.model.tig00000821.60 no hits & (original description: no original description) 0.9107071311177155 75 evm.model.tig00021489.7 no hits & (original description: no original description) 0.909606434677318 76 evm.model.tig00021126.26 no hits & (original description: no original description) 0.9089899044787302 77 evm.model.tig00001029.42 no hits & (original description: no original description) 0.9087634288115456 78 evm.model.tig00001408.8 no hits & (original description: no original description) 0.908594317749801 79 evm.model.tig00000802.61 no hits & (original description: no original description) 0.9083285878445532 80 evm.model.tig00000254.66 no hits & (original description: no original description) 0.9080162343097643 82 evm.model.tig00000615.83 no hits & (original description: no original description) 0.9078721438273191 83 evm.model.tig00020909.28 no hits & (original description: no original description) 0.9077552624126021 85 evm.model.tig00000350.11 no hits & (original description: no original description) 0.9074761574943968 86 evm.model.tig00021127.171 no hits & (original description: no original description) 0.9069925989382774 87 evm.model.tig00020996.10 (at3g09090 : 124.0) Encodes DEX1 (defective in exine formation). Required for exine pattern formation during pollen development.; DEFECTIVE IN EXINE FORMATION 1 (DEX1); CONTAINS InterPro DOMAIN/s: FG-GAP (InterPro:IPR013517). & (reliability: 248.0) & (original description: no original description) 0.9067461480194635 88 evm.model.tig00001333.29 no hits & (original description: no original description) 0.905506255045836 92 evm.model.tig00000042.240 no hits & (original description: no original description) 0.9054120740470805 93 evm.model.tig00000241.154 (at1g37150 : 117.0) holocarboxylase synthetase 2 (HCS2); FUNCTIONS IN: biotin-[acetyl-CoA-carboxylase] ligase activity, catalytic activity; INVOLVED IN: protein modification process; EXPRESSED IN: pedicel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Biotin protein ligase, C-terminal (InterPro:IPR003142), Biotin/lipoate A/B protein ligase (InterPro:IPR004143), Biotin--acetyl-CoA-carboxylase ligase (InterPro:IPR004408); BEST Arabidopsis thaliana protein match is: holocarboxylase synthase 1 (TAIR:AT2G25710.2); Has 6001 Blast hits to 6001 proteins in 2273 species: Archae - 223; Bacteria - 3976; Metazoa - 118; Fungi - 132; Plants - 62; Viruses - 0; Other Eukaryotes - 1490 (source: NCBI BLink). & (reliability: 234.0) & (original description: no original description) 0.9050794140746348 94 evm.model.tig00001224.24 no hits & (original description: no original description) 0.9046173232372005 96 evm.model.tig00000144.68 no hits & (original description: no original description) 0.9038977851817633 98 evm.model.tig00021319.6 no hits & (original description: no original description) 0.9029682399469693 100