Sequence Description Alias PCC hrr evm.model.tig00021037.43 no hits & (original description: no original description) 0.9297737938208305 2 evm.model.tig00021038.99 (at3g08505 : 137.0) zinc finger (CCCH-type/C3HC4-type RING finger) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 274.0) & (original description: no original description) 0.9288881314170961 3 evm.model.tig00020614.3 (at5g28350 : 221.0) Quinoprotein amine dehydrogenase, beta chain-like; RIC1-like guanyl-nucleotide exchange factor; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Ribosome control protein 1 (InterPro:IPR009771), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Quinoprotein amine dehydrogenase, beta chain-like (InterPro:IPR011044); BEST Arabidopsis thaliana protein match is: Quinoprotein amine dehydrogenase, beta chain-like; RIC1-like guanyl-nucleotide exchange factor (TAIR:AT3G61480.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 442.0) & (original description: no original description) 0.9279603172907638 3 evm.model.tig00021612.42 no hits & (original description: no original description) 0.9142088009268827 11 evm.model.tig00000237.10 no hits & (original description: no original description) 0.9140108606222127 5 evm.model.tig00000444.29 no hits & (original description: no original description) 0.9139007713887128 6 evm.model.tig00001636.6 no hits & (original description: no original description) 0.9106245323939306 9 evm.model.tig00000507.28 no hits & (original description: no original description) 0.906560674174141 8 evm.model.tig00001224.12 no hits & (original description: no original description) 0.9027110426855289 16 evm.model.tig00020943.19 (at2g40550 : 152.0) Encodes a nuclear localized target of E2Fa-DPa, transcription factors controlling cell cycle progression. Required for sister chromatid cohesion and DNA repair.; E2F target gene 1 (ETG1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: sister chromatid cohesion, postreplication repair, DNA replication; LOCATED IN: nuclear replisome, nucleus, chloroplast envelope, MCM complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2044, membrane (InterPro:IPR019140); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 304.0) & (original description: no original description) 0.9000142244615659 37 evm.model.tig00020930.5 no hits & (original description: no original description) 0.8993816616846694 11 evm.model.tig00000282.13 no hits & (original description: no original description) 0.8975626415721653 25 evm.model.tig00021623.18 no hits & (original description: no original description) 0.8962838490969279 16 evm.model.tig00021623.14 no hits & (original description: no original description) 0.8951565835853551 14 evm.model.tig00000145.36 no hits & (original description: no original description) 0.8931386209475923 16 evm.model.tig00000169.20 no hits & (original description: no original description) 0.8925463125449425 16 evm.model.tig00021073.3 no hits & (original description: no original description) 0.891297538965022 17 evm.model.tig00000989.45 no hits & (original description: no original description) 0.8875359347171579 18 evm.model.tig00021281.36 (at2g14255 : 101.0) Ankyrin repeat family protein with DHHC zinc finger domain; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein with DHHC zinc finger domain (TAIR:AT5G20350.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q8vyx2|akt1_orysa : 86.7) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (reliability: 202.0) & (original description: no original description) 0.8853293932138377 19 evm.model.tig00001154.4 (at3g63460 : 140.0) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G18830.1). & (reliability: 280.0) & (original description: no original description) 0.8853024175084521 20 evm.model.tig00000459.100 no hits & (original description: no original description) 0.8841622678071687 65 evm.model.tig00020603.27 no hits & (original description: no original description) 0.884094273625645 35 evm.model.tig00001056.7 (at1g25500 : 94.7) Plasma-membrane choline transporter family protein; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF580 (InterPro:IPR007603); BEST Arabidopsis thaliana protein match is: Plasma-membrane choline transporter family protein (TAIR:AT5G13760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 189.4) & (original description: no original description) 0.8820357084667565 23 evm.model.tig00001056.23 no hits & (original description: no original description) 0.8762626740867013 56 evm.model.tig00021319.22 no hits & (original description: no original description) 0.876135392458996 42 evm.model.tig00000769.5 no hits & (original description: no original description) 0.8760396666886203 26 evm.model.tig00000630.45 (at4g16180 : 90.5) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G28720.1); Has 5 Blast hits to 5 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 181.0) & (original description: no original description) 0.8753365148011606 27 evm.model.tig00020554.56 no hits & (original description: no original description) 0.8734444657887594 81 evm.model.tig00021617.17 no hits & (original description: no original description) 0.8730748645029721 50 evm.model.tig00001302.2 no hits & (original description: no original description) 0.8709555996399179 43 evm.model.tig00021217.5 no hits & (original description: no original description) 0.8703457305790127 31 evm.model.tig00000180.26 no hits & (original description: no original description) 0.8668468739770993 87 evm.model.tig00000640.21 no hits & (original description: no original description) 0.8662553975736664 34 evm.model.tig00000655.10 no hits & (original description: no original description) 0.8662057826112645 35 evm.model.tig00001484.1 no hits & (original description: no original description) 0.8661455752067065 47 evm.model.tig00020610.22 no hits & (original description: no original description) 0.8660861750139137 80 evm.model.tig00000269.32 no hits & (original description: no original description) 0.8644995403486448 38 evm.model.tig00001042.33 no hits & (original description: no original description) 0.8644898689832863 39 evm.model.tig00020912.61 no hits & (original description: no original description) 0.8631494210721387 59 evm.model.tig00020537.57 no hits & (original description: no original description) 0.8618794783820682 60 evm.model.tig00000769.27 no hits & (original description: no original description) 0.8617906016104834 42 evm.model.tig00000863.25 no hits & (original description: no original description) 0.8587192447727385 43 evm.model.tig00021435.30 no hits & (original description: no original description) 0.858635364459099 44 evm.model.tig00021435.17 no hits & (original description: no original description) 0.8569683360798522 46 evm.model.tig00000383.68 no hits & (original description: no original description) 0.8557873133595515 47 evm.model.tig00000473.5 no hits & (original description: no original description) 0.8534232095971529 49 evm.model.tig00000157.113 no hits & (original description: no original description) 0.8522017496750015 50 evm.model.tig00000147.73 no hits & (original description: no original description) 0.8507981545882116 51 evm.model.tig00000630.9 (at4g23470 : 104.0) PLAC8 family protein; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT1G63830.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 208.0) & (original description: no original description) 0.8496466173735597 52 evm.model.tig00000489.17 (at4g02070 : 353.0) encodes a DNA mismatch repair homolog of human MutS gene, MSH6. There are four MutS genes in Arabidopsis, MSH2, MSH3, MSH6, and MSH7, which all act as heterodimers and bind to 51-mer duplexes. MSH2*MSH6 bound the (+T) substrate strongly, (T/G) well, and (+AAG) no better than it did a (T/A) homoduplex.; MUTS homolog 6 (MSH6); FUNCTIONS IN: damaged DNA binding; INVOLVED IN: mismatch repair; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein Msh6 (InterPro:IPR017261), DNA mismatch repair protein MutS, clamp (InterPro:IPR007861), DNA mismatch repair protein MutS, connector (InterPro:IPR007860), DNA mismatch repair protein MutS, core (InterPro:IPR007696), DNA mismatch repair protein MutS-like, N-terminal (InterPro:IPR007695), DNA mismatch repair protein MutS, N-terminal (InterPro:IPR016151), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432), DNA mismatch repair protein MutS-homologue MSH6 (InterPro:IPR015536), Tudor domain (InterPro:IPR002999); BEST Arabidopsis thaliana protein match is: homolog of DNA mismatch repair protein MSH3 (TAIR:AT4G25540.1). & (q9xgc9|msh2_maize : 149.0) DNA mismatch repair protein MSH2 (MUS1) - Zea mays (Maize) & (reliability: 706.0) & (original description: no original description) 0.8482573901240583 53 evm.model.tig00000114.29 no hits & (original description: no original description) 0.8477113600962967 55 evm.model.tig00020930.8 no hits & (original description: no original description) 0.846096188853596 73 evm.model.tig00021374.7 no hits & (original description: no original description) 0.8452186224602302 59 evm.model.tig00020849.4 no hits & (original description: no original description) 0.8446728720183397 60 evm.model.tig00000057.96 no hits & (original description: no original description) 0.8416307139503411 61 evm.model.tig00000403.99 no hits & (original description: no original description) 0.8411053451248319 63 evm.model.tig00000821.53 no hits & (original description: no original description) 0.8409470482366137 64 evm.model.tig00000478.32 no hits & (original description: no original description) 0.8384986090132086 66 evm.model.tig00021293.14 (at2g30160 : 124.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: transporter activity, binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT1G07030.1); Has 27492 Blast hits to 13803 proteins in 455 species: Archae - 0; Bacteria - 0; Metazoa - 11880; Fungi - 7531; Plants - 5269; Viruses - 0; Other Eukaryotes - 2812 (source: NCBI BLink). & (reliability: 248.0) & (original description: no original description) 0.8378137736054012 68 evm.model.tig00000704.13 no hits & (original description: no original description) 0.8376581579649797 69 evm.model.tig00000042.107 no hits & (original description: no original description) 0.8375205525412192 70 evm.model.tig00000882.17 no hits & (original description: no original description) 0.8369995035553675 71 evm.model.tig00001604.5 no hits & (original description: no original description) 0.8367391448799977 72 evm.model.tig00000057.36 (at1g77740 : 150.0) Encodes PIP5K2, a phosphatidylinositol-4-phosphate 5-kinase (PtdIns(4)P 5-kinase 2; or PIP5K2).; phosphatidylinositol-4-phosphate 5-kinase 2 (PIP5K2); CONTAINS InterPro DOMAIN/s: Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup (InterPro:IPR016034), Phosphatidylinositol-4-phosphate 5-kinase, plant (InterPro:IPR017163), MORN motif (InterPro:IPR003409), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: phosphatidylinositol-4-phosphate 5-kinase 1 (TAIR:AT1G21980.1); Has 28568 Blast hits to 7904 proteins in 613 species: Archae - 0; Bacteria - 4095; Metazoa - 4135; Fungi - 445; Plants - 2701; Viruses - 0; Other Eukaryotes - 17192 (source: NCBI BLink). & (q6ex42|pi5k1_orysa : 125.0) Phosphatidylinositol-4-phosphate 5-kinase 1 precursor (EC 2.7.1.68) (1-phosphatidylinositol-4-phosphate kinase) (PIP5K) (PtdIns(4)P-5-kinase) (Diphosphoinositide kinase) - Oryza sativa (Rice) & (reliability: 300.0) & (original description: no original description) 0.8366987363067474 84 evm.model.tig00000852.38 no hits & (original description: no original description) 0.8365115492799591 76 evm.model.tig00020556.72 no hits & (original description: no original description) 0.8362910702920644 77 evm.model.tig00020537.56 no hits & (original description: no original description) 0.8359713963212742 78 evm.model.tig00021036.8 no hits & (original description: no original description) 0.8353417766821691 79 evm.model.tig00021108.84 no hits & (original description: no original description) 0.8342694084201748 80 evm.model.tig00000480.43 (at3g24590 : 83.6) Encodes a signal peptidase Plsp1 (plastidic type I signal peptidase 1). Required for thylakoid development. Functions in the maturation of the 75-kD component of the translocon at the outer envelope membrane of chloroplasts and oxygen evolving complex subunit 33 (OE33).; plastidic type i signal peptidase 1 (PLSP1); FUNCTIONS IN: peptidase activity; INVOLVED IN: proteolysis, thylakoid membrane organization, protein maturation; LOCATED IN: chloroplast thylakoid membrane, chloroplast, membrane, plastid envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S24/S26A/S26B/S26C, beta-ribbon domain (InterPro:IPR011056), Peptidase S24/S26A/S26B/S26C (InterPro:IPR015927), Peptidase S26A, signal peptidase I, conserved site (InterPro:IPR019758), Peptidase S26, conserved region (InterPro:IPR019533), Peptidase S26A, signal peptidase I (InterPro:IPR000223), Peptidase S26A, signal peptidase I, serine active site (InterPro:IPR019756); BEST Arabidopsis thaliana protein match is: Peptidase S24/S26A/S26B/S26C family protein (TAIR:AT1G06870.1); Has 9773 Blast hits to 9438 proteins in 2404 species: Archae - 0; Bacteria - 7280; Metazoa - 206; Fungi - 105; Plants - 230; Viruses - 0; Other Eukaryotes - 1952 (source: NCBI BLink). & (reliability: 167.2) & (original description: no original description) 0.8342015682083932 81 evm.model.tig00001278.20 (at3g54380 : 83.6) SAC3/GANP/Nin1/mts3/eIF-3 p25 family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SAC3/GANP/Nin1/mts3/eIF-3 p25 (InterPro:IPR005062); BEST Arabidopsis thaliana protein match is: SAC3/GANP/Nin1/mts3/eIF-3 p25 family (TAIR:AT3G06290.1). & (reliability: 167.2) & (original description: no original description) 0.8339036629223568 83 evm.model.tig00000970.3 (at3g14010 : 125.0) hydroxyproline-rich glycoprotein family protein, similar to Mrs16p (GI:2737884) (Saccharomyces cerevisiae); weak similarity to ataxin-2 related protein (GI:1679686) (Homo sapiens). Included in a family of CTC interacting domain proteins found to interact with PAB2.; CTC-interacting domain 4 (CID4); FUNCTIONS IN: protein binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LsmAD domain (InterPro:IPR009604), Ataxin-2, C-terminal (InterPro:IPR009818); BEST Arabidopsis thaliana protein match is: CTC-interacting domain 3 (TAIR:AT1G54170.1). & (reliability: 230.0) & (original description: no original description) 0.8335324705973767 84 evm.model.tig00021501.9 (at3g57300 : 465.0) Encodes the Arabidopsis INO80 ortholog of the SWI/SNF ATPase family. Functions as a positive regulator of DNA homologous recombination (HR). In INO80 mutants, the HR frequency is reduced to 15% of that in the wild-type. Mutation in INO80 does not affect sensitivity to genotoxic agents and efficiency of T-DNA integration. INO80 was also shown to regulate a subset of the Arabidopsis transcriptome.; INO80 ortholog (INO80); FUNCTIONS IN: helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: somatic cell DNA recombination, positive regulation of DNA repair, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA binding domain, INO80 (InterPro:IPR020838), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: SNF2 domain-containing protein / helicase domain-containing protein (TAIR:AT3G12810.1). & (q7g8y3|isw2_orysa : 244.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 930.0) & (original description: no original description) 0.8332151764111051 85 evm.model.tig00000431.16 no hits & (original description: no original description) 0.8326983589190322 91 evm.model.tig00000093.195 no hits & (original description: no original description) 0.832632997749176 88 evm.model.tig00000865.49 no hits & (original description: no original description) 0.832216168939428 90 evm.model.tig00020996.13 (at5g19500 : 102.0) Tryptophan/tyrosine permease; CONTAINS InterPro DOMAIN/s: Tryptophan/tyrosine permease (InterPro:IPR018227); BEST Arabidopsis thaliana protein match is: Tryptophan/tyrosine permease (TAIR:AT2G33260.1); Has 3446 Blast hits to 3440 proteins in 699 species: Archae - 29; Bacteria - 3077; Metazoa - 10; Fungi - 2; Plants - 199; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (reliability: 204.0) & (original description: no original description) 0.8305707916805946 92 evm.model.tig00021589.32 no hits & (original description: no original description) 0.8304878758520685 93 evm.model.tig00001000.26 no hits & (original description: no original description) 0.8293952861532781 94 evm.model.tig00000293.29 no hits & (original description: no original description) 0.8288917403671373 95 evm.model.tig00021318.40 no hits & (original description: no original description) 0.8286824253956665 96 evm.model.tig00000361.29 no hits & (original description: no original description) 0.8283387362728538 99