Sequence Description Alias PCC hrr evm.model.tig00000158.84 (at2g34660 : 395.0) encodes a multidrug resistance-associated protein that is MgATP-energized glutathione S-conjugate pump. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.; multidrug resistance-associated protein 2 (MRP2); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 1 (TAIR:AT1G30400.2). & (q6yuu5|mdr_orysa : 119.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 790.0) & (original description: no original description) 0.9882745577978237 1 evm.model.tig00020553.67 no hits & (original description: no original description) 0.9823999235156682 2 evm.model.tig00020611.5 no hits & (original description: no original description) 0.9821269072550083 3 evm.model.tig00021105.38 no hits & (original description: no original description) 0.9643244942612144 4 evm.model.tig00020557.12 no hits & (original description: no original description) 0.9635298553232333 5 evm.model.tig00020510.51 no hits & (original description: no original description) 0.9577707969810176 6 evm.model.tig00020557.13 no hits & (original description: no original description) 0.9363118868431994 7 evm.model.tig00021073.46 no hits & (original description: no original description) 0.9333992664730595 8 evm.model.tig00000158.85 no hits & (original description: no original description) 0.9279844415973526 18 evm.model.tig00000403.6 no hits & (original description: no original description) 0.9179059797474959 10 evm.model.tig00000215.4 no hits & (original description: no original description) 0.9112861730986964 20 evm.model.tig00000190.43 no hits & (original description: no original description) 0.9008193106351919 12 evm.model.tig00000076.123 (at5g39840 : 286.0) ATP-dependent RNA helicase, mitochondrial, putative; FUNCTIONS IN: helicase activity, ATP-dependent RNA helicase activity, nucleic acid binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial degradasome RNA helicase subunit C-terminal (InterPro:IPR022192), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, mitochondrial (SUV3) (TAIR:AT4G14790.1); Has 4068 Blast hits to 4044 proteins in 754 species: Archae - 43; Bacteria - 1236; Metazoa - 267; Fungi - 388; Plants - 157; Viruses - 16; Other Eukaryotes - 1961 (source: NCBI BLink). & (reliability: 532.0) & (original description: no original description) 0.8947493034573606 13 evm.model.tig00000093.95 no hits & (original description: no original description) 0.8883992510875405 14 evm.model.tig00020531.28 no hits & (original description: no original description) 0.8643061875827927 15 evm.model.tig00021314.15 no hits & (original description: no original description) 0.8625022082959175 20 evm.model.tig00020952.41 no hits & (original description: no original description) 0.8565331611364418 28 evm.model.tig00000788.28 no hits & (original description: no original description) 0.8556290364589944 30 evm.model.tig00000057.40 (at1g14000 : 87.8) Encodes a protein with similarity to members of the C1 subgroup of MAP kinase kinase kinases. Interacts physically with the receptor kinase BRL2/VH1 and appears to be involved in auxin and brassinosteriod signaling.; VH1-interacting kinase (VIK); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Integrin-linked protein kinase (InterPro:IPR016253), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Integrin-linked protein kinase family (TAIR:AT3G58760.1); Has 139285 Blast hits to 133759 proteins in 5118 species: Archae - 180; Bacteria - 15286; Metazoa - 53967; Fungi - 12530; Plants - 33711; Viruses - 527; Other Eukaryotes - 23084 (source: NCBI BLink). & (reliability: 175.6) & (original description: no original description) 0.8454361788984385 46 evm.model.tig00001387.2 no hits & (original description: no original description) 0.8418181063589261 29 evm.model.tig00021036.42 no hits & (original description: no original description) 0.8418181063589261 29 evm.model.tig00020878.2 no hits & (original description: no original description) 0.8418181063589254 29 evm.model.tig00020753.3 no hits & (original description: no original description) 0.8418181063589254 29 evm.model.tig00020571.20 no hits & (original description: no original description) 0.8418181063589254 29 evm.model.tig00020902.76 no hits & (original description: no original description) 0.8418181063589254 29 evm.model.tig00000269.90 no hits & (original description: no original description) 0.8418181063589254 29 evm.model.tig00000219.88 no hits & (original description: no original description) 0.8418181063589254 29 evm.model.tig00021038.63 no hits & (original description: no original description) 0.8418181063589254 29 evm.model.tig00021047.1 no hits & (original description: no original description) 0.8418181063589254 29 evm.model.tig00001071.4 no hits & (original description: no original description) 0.8418181063589254 30 evm.model.tig00020724.1 no hits & (original description: no original description) 0.8395696179311122 31 evm.model.tig00000104.3 no hits & (original description: no original description) 0.825332671697366 32 evm.model.tig00020610.117 no hits & (original description: no original description) 0.8234086268006947 33 evm.model.tig00001128.35 no hits & (original description: no original description) 0.8165335247799623 48 evm.model.tig00021582.10 (at4g22220 : 202.0) Encodes a mitochondrial protein similar to E.coli IscU. In bacteria, IscU is a scaffold protein accepting sulfur and iron to build a transient Fe-S cluster,which is subsequently transferred to a target apoprotein.; ISU1; CONTAINS InterPro DOMAIN/s: NIF system FeS cluster assembly, NifU, N-terminal (InterPro:IPR002871), ISC system FeS cluster assembly, IscU scaffold (InterPro:IPR011339); BEST Arabidopsis thaliana protein match is: ISCU-like 3 (TAIR:AT4G04080.1); Has 5453 Blast hits to 5453 proteins in 1998 species: Archae - 110; Bacteria - 3654; Metazoa - 148; Fungi - 154; Plants - 89; Viruses - 0; Other Eukaryotes - 1298 (source: NCBI BLink). & (reliability: 400.0) & (original description: no original description) 0.8129193672239958 86 evm.model.tig00020912.27 (at4g26650 : 185.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G55550.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p19682|roc3_nicsy : 94.0) 28 kDa ribonucleoprotein, chloroplast precursor (28RNP) - Nicotiana sylvestris (Wood tobacco) & (reliability: 370.0) & (original description: no original description) 0.8065890886226846 77 evm.model.tig00021038.48 no hits & (original description: no original description) 0.7937221726221582 37 evm.model.tig00020848.55 (p22302|sodf_nicpl : 158.0) Superoxide dismutase [Fe], chloroplast (EC 1.15.1.1) (Fragment) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at5g51100 : 138.0) Fe superoxide dismutase whose mRNA levels are increased in response to exposure to UV-B.; Fe superoxide dismutase 2 (FSD2); FUNCTIONS IN: superoxide dismutase activity; INVOLVED IN: response to UV; LOCATED IN: chloroplast, nucleoid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Manganese/iron superoxide dismutase, N-terminal (InterPro:IPR019831), Manganese/iron superoxide dismutase (InterPro:IPR001189), Manganese/iron superoxide dismutase, C-terminal (InterPro:IPR019832), Manganese/iron superoxide dismutase, binding site (InterPro:IPR019833); BEST Arabidopsis thaliana protein match is: Fe superoxide dismutase 1 (TAIR:AT4G25100.5); Has 11522 Blast hits to 11521 proteins in 3361 species: Archae - 194; Bacteria - 8106; Metazoa - 433; Fungi - 799; Plants - 399; Viruses - 1; Other Eukaryotes - 1590 (source: NCBI BLink). & (reliability: 276.0) & (original description: no original description) 0.7917787259064925 38 evm.model.tig00021326.4 no hits & (original description: no original description) 0.7916055899437558 39 evm.model.tig00021582.5 no hits & (original description: no original description) 0.7896261606278095 59 evm.model.tig00000692.43 no hits & (original description: no original description) 0.7881457613059897 42 evm.model.tig00000113.78 no hits & (original description: no original description) 0.7817314656581895 44 evm.model.tig00020830.83 no hits & (original description: no original description) 0.7785001668208659 45 evm.model.tig00021035.13 no hits & (original description: no original description) 0.7705519395535252 50 evm.model.tig00001493.17 no hits & (original description: no original description) 0.7650219292235511 49 evm.model.tig00000113.61 (at3g19000 : 216.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G19010.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q06942|fl3h_maldo : 139.0) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 432.0) & (original description: no original description) 0.7618884590512943 67 evm.model.tig00000383.41 no hits & (original description: no original description) 0.7521955371282523 98 evm.model.tig00000144.67 no hits & (original description: no original description) 0.7515709606838702 52 evm.model.tig00000042.239 no hits & (original description: no original description) 0.7500535245422103 53 evm.model.tig00000331.17 no hits & (original description: no original description) 0.7496901109350363 54 evm.model.tig00000823.5 no hits & (original description: no original description) 0.745213832613422 55 evm.model.tig00000215.73 no hits & (original description: no original description) 0.7416989133816333 58 evm.model.tig00001027.10 no hits & (original description: no original description) 0.7363842788831196 81 evm.model.tig00020830.70 no hits & (original description: no original description) 0.7361389030492128 61 evm.model.tig00000655.13 no hits & (original description: no original description) 0.7292613639872152 72 evm.model.tig00000056.21 no hits & (original description: no original description) 0.7249745596124313 75 evm.model.tig00001729.5 no hits & (original description: no original description) 0.7227678557164318 77 evm.model.tig00000076.99 (at4g16440 : 308.0) Encodes a [FeFe]-hydrogenase-like protein named Gollum (for Growth in different Oxygen LeveLs inflUences Morphogenesis). Heterologous expression of Gollum in E. coli indicates that it probably contains two [Fe-S] clusters with different magnetic properties. Sequence alignment analysis indicates that these two clusters would be topologically equivalent to the mesial and proximal [Fe-S] centers of [FeFe]-hydrogenases. Knockdown mutants (RNAi) show a dwarf phenotype at the normal atmospheric partial oxygen pressure of 21 kPa. This dwarf phenotype could be rescued by growing the plant under low oxygen pressure (5kPa), suggesting a role for this gene in oxygen sensing.; ferredoxin hydrogenases; CONTAINS InterPro DOMAIN/s: Iron hydrogenase, large subunit, C-terminal (InterPro:IPR004108), Iron hydrogenase (InterPro:IPR009016), Iron hydrogenase, small subunit-like (InterPro:IPR003149); Has 2574 Blast hits to 2544 proteins in 612 species: Archae - 1; Bacteria - 1826; Metazoa - 221; Fungi - 188; Plants - 72; Viruses - 0; Other Eukaryotes - 266 (source: NCBI BLink). & (reliability: 616.0) & (original description: no original description) 0.7215939242177724 79 evm.model.tig00000402.53 no hits & (original description: no original description) 0.7167407694428292 81 evm.model.tig00021357.36 no hits & (original description: no original description) 0.7148629113023331 92 evm.model.tig00021122.21 no hits & (original description: no original description) 0.7135334251609036 84 evm.model.tig00021434.27 no hits & (original description: no original description) 0.7083952374073207 90 evm.model.tig00020557.10 no hits & (original description: no original description) 0.7057073006692619 93 evm.model.tig00000455.53 no hits & (original description: no original description) 0.7025613953254989 96 evm.model.tig00000403.18 (at2g47130 : 82.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G29260.1); Has 122340 Blast hits to 122121 proteins in 3572 species: Archae - 980; Bacteria - 79164; Metazoa - 5393; Fungi - 6725; Plants - 2704; Viruses - 5; Other Eukaryotes - 27369 (source: NCBI BLink). & (reliability: 164.0) & (original description: no original description) 0.7003970014147899 99