Sequence Description Alias PCC hrr evm.model.tig00000981.12 no hits & (original description: no original description) 0.9435702249406702 1 evm.model.tig00021293.27 no hits & (original description: no original description) 0.9382479790215197 9 evm.model.tig00000821.37 (at3g06720 : 85.5) Encodes importin alpha involved in nuclear import.; AT-IMP; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus; LOCATED IN: cytosol, nuclear envelope, nucleolus, cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Importin-alpha-like, importin-beta-binding domain (InterPro:IPR002652), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: importin alpha isoform 2 (TAIR:AT4G16143.2); Has 4059 Blast hits to 2974 proteins in 281 species: Archae - 4; Bacteria - 22; Metazoa - 1537; Fungi - 665; Plants - 1109; Viruses - 0; Other Eukaryotes - 722 (source: NCBI BLink). & (reliability: 171.0) & (original description: no original description) 0.9228444991695011 15 evm.model.tig00021464.9 no hits & (original description: no original description) 0.9218589180246294 13 evm.model.tig00020616.46 no hits & (original description: no original description) 0.9200981994077786 50 evm.model.tig00021468.6 no hits & (original description: no original description) 0.9200520667210103 29 evm.model.tig00000624.18 no hits & (original description: no original description) 0.918471760893013 11 evm.model.tig00000851.36 no hits & (original description: no original description) 0.9174486154577726 23 evm.model.tig00020807.20 no hits & (original description: no original description) 0.9169923522260337 14 evm.model.tig00000025.34 no hits & (original description: no original description) 0.9146263962277345 12 evm.model.tig00020684.14 no hits & (original description: no original description) 0.9111378938262231 46 evm.model.tig00020961.140 no hits & (original description: no original description) 0.9096775776456455 40 evm.model.tig00001486.2 no hits & (original description: no original description) 0.9087275921940832 13 evm.model.tig00000984.10 no hits & (original description: no original description) 0.9084256425735846 43 evm.model.tig00020660.27 no hits & (original description: no original description) 0.9075715701192233 72 evm.model.tig00001181.33 no hits & (original description: no original description) 0.9072957189103477 16 evm.model.tig00000545.16 no hits & (original description: no original description) 0.9044861665759505 50 evm.model.tig00000402.2 no hits & (original description: no original description) 0.9033789030232205 75 evm.model.tig00000237.37 (at2g46110 : 135.0) Encodes a ketopentoate hydroxymethyltransferase that appears to localize to the mitochondria. This protein is expected to play a role in pantothenate (vitamin B5) biosynthesis.; ketopantoate hydroxymethyltransferase 1 (KPHMT1); CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Ketopantoate hydroxymethyltransferase (InterPro:IPR003700); BEST Arabidopsis thaliana protein match is: Phosphoenolpyruvate carboxylase family protein (TAIR:AT3G61530.2); Has 7565 Blast hits to 7565 proteins in 2036 species: Archae - 128; Bacteria - 4147; Metazoa - 4; Fungi - 140; Plants - 59; Viruses - 0; Other Eukaryotes - 3087 (source: NCBI BLink). & (reliability: 270.0) & (original description: no original description) 0.9024942511387302 19 evm.model.tig00021122.9 no hits & (original description: no original description) 0.9005348785394511 80 evm.model.tig00000912.37 no hits & (original description: no original description) 0.9004917171853043 66 evm.model.tig00000880.42 (at4g26400 : 102.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G56340.1); Has 10466 Blast hits to 10426 proteins in 293 species: Archae - 0; Bacteria - 6; Metazoa - 2695; Fungi - 997; Plants - 5209; Viruses - 70; Other Eukaryotes - 1489 (source: NCBI BLink). & (reliability: 204.0) & (original description: no original description) 0.9002284660800142 29 evm.model.tig00001181.9 (at1g54080 : 240.0) oligouridylate-binding protein 1A (UBP1A); FUNCTIONS IN: mRNA 3'-UTR binding; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G14100.1); Has 22193 Blast hits to 15481 proteins in 722 species: Archae - 0; Bacteria - 1057; Metazoa - 11734; Fungi - 2918; Plants - 4318; Viruses - 0; Other Eukaryotes - 2166 (source: NCBI BLink). & (q08935|roc1_nicsy : 98.6) 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A) - Nicotiana sylvestris (Wood tobacco) & (reliability: 480.0) & (original description: no original description) 0.9001449107851506 23 evm.model.tig00021293.10 no hits & (original description: no original description) 0.8986872894947396 66 evm.model.tig00021433.12 no hits & (original description: no original description) 0.8980123014185709 74 evm.model.tig00000808.9 no hits & (original description: no original description) 0.8964040683844579 75 evm.model.tig00000405.70 no hits & (original description: no original description) 0.8962409315235789 27 evm.model.tig00000441.9 no hits & (original description: no original description) 0.8947184546799212 40 evm.model.tig00001376.10 no hits & (original description: no original description) 0.894166485159491 38 evm.model.tig00000025.32 no hits & (original description: no original description) 0.8940657427862526 30 evm.model.tig00000248.7 no hits & (original description: no original description) 0.8934476519858938 40 evm.model.tig00000737.29 no hits & (original description: no original description) 0.8912638636197433 33 evm.model.tig00000145.15 no hits & (original description: no original description) 0.8906058538226671 33 evm.model.tig00000157.79 no hits & (original description: no original description) 0.8905947053527251 34 evm.model.tig00001532.4 no hits & (original description: no original description) 0.8903393980819682 35 evm.model.tig00001292.19 no hits & (original description: no original description) 0.8899990653388123 99 evm.model.tig00000865.47 (at5g63910 : 80.5) Encodes a farnesylcysteine lyase (EC 1.8.3.5) involved in a salvage /detoxification pathway of farnesylcysteine (FC) residues that are liberated during the degradation of prenylated proteins. Because FC is a competitive inhibitor of prenylcysteine methyltransferases involved in the down-regulation of ABA signaling, fcly mutants with elevated FC levels are hypersensitive to ABA. The protein also appears to be glycosylated when translated in vitro in the presence of microsomal membranes and it likely requires FAD for enzymatic activity.; farnesylcysteine lyase (FCLY); FUNCTIONS IN: prenylcysteine oxidase activity; INVOLVED IN: prenylated protein catabolic process, abscisic acid mediated signaling pathway, farnesyl diphosphate metabolic process; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Prenylcysteine lyase (InterPro:IPR010795), Prenylcysteine oxidase (InterPro:IPR017046); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 161.0) & (original description: no original description) 0.8875804612076688 74 evm.model.tig00000444.16 no hits & (original description: no original description) 0.8873681921407272 38 evm.model.tig00001264.23 no hits & (original description: no original description) 0.8872472332641942 76 evm.model.tig00021037.54 no hits & (original description: no original description) 0.884541542237413 42 evm.model.tig00001408.13 no hits & (original description: no original description) 0.8843648866615776 43 evm.model.tig00000488.9 no hits & (original description: no original description) 0.8816773445331794 50 evm.model.tig00021127.136 no hits & (original description: no original description) 0.8806521405067074 51 evm.model.tig00001056.10 no hits & (original description: no original description) 0.8801276703412835 52 evm.model.tig00001299.11 no hits & (original description: no original description) 0.8784459541407662 53 evm.model.tig00021339.25 no hits & (original description: no original description) 0.8778985696566814 54 evm.model.tig00021127.144 (at1g03260 : 94.0) SNARE associated Golgi protein family; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SNARE associated Golgi protein (InterPro:IPR015414); BEST Arabidopsis thaliana protein match is: SNARE associated Golgi protein family (TAIR:AT5G19070.1); Has 5379 Blast hits to 5379 proteins in 1283 species: Archae - 29; Bacteria - 3492; Metazoa - 274; Fungi - 131; Plants - 303; Viruses - 0; Other Eukaryotes - 1150 (source: NCBI BLink). & (reliability: 188.0) & (original description: no original description) 0.8776446007386568 55 evm.model.tig00021428.32 no hits & (original description: no original description) 0.8776231299975654 56 evm.model.tig00001007.13 no hits & (original description: no original description) 0.8772850467530453 60 evm.model.tig00021440.9 no hits & (original description: no original description) 0.876539579570118 99 evm.model.tig00001154.35 no hits & (original description: no original description) 0.8764878736798909 62 evm.model.tig00001126.3 (at5g44740 : 95.1) Y-family DNA polymerase. Catalyses translesion synthesis in response to UV damage. Functionally interacts with PCNA2. Has a ubiquitin binding motif.; Y-family DNA polymerase H (POLH); CONTAINS InterPro DOMAIN/s: DNA polymerase eta (InterPro:IPR017061), DNA-repair protein, UmuC-like (InterPro:IPR001126), DNA-repair protein, UmuC-like, N-terminal (InterPro:IPR017963); BEST Arabidopsis thaliana protein match is: DNA-directed DNA polymerases (TAIR:AT5G44750.1); Has 8088 Blast hits to 8015 proteins in 2292 species: Archae - 210; Bacteria - 5635; Metazoa - 500; Fungi - 401; Plants - 163; Viruses - 3; Other Eukaryotes - 1176 (source: NCBI BLink). & (reliability: 190.2) & (original description: no original description) 0.8750494757702874 64 evm.model.tig00001181.19 (at1g17370 : 177.0) oligouridylate binding protein 1B (UBP1B); FUNCTIONS IN: mRNA 3'-UTR binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G14100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 354.0) & (original description: no original description) 0.8748660506817482 78 evm.model.tig00020610.133 no hits & (original description: no original description) 0.8739308745660515 67 evm.model.tig00000741.29 (at1g01040 : 82.8) Encodes a Dicer homolog. Dicer is a RNA helicase involved in microRNA processing. Mutations in this locus can result in embryo lethality. Embryo shape at seed maturity is globular-elongate. Other mutants convert the floral meristems to an indeterminate state, others yet show defects in ovule development. mRNA is expressed in all shoot tissues. DCL1 is able to produce miRNAs and siRNAs.; dicer-like 1 (DCL1); CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), Double-stranded RNA-binding (InterPro:IPR001159), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Ribonuclease III (InterPro:IPR000999), Double-stranded RNA-binding-like (InterPro:IPR014720), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Dicer double-stranded RNA-binding fold (InterPro:IPR005034), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: dicer-like 3 (TAIR:AT3G43920.1). & (reliability: 165.6) & (original description: no original description) 0.873904352650671 72 evm.model.tig00021591.10 no hits & (original description: no original description) 0.8731495912555537 70 evm.model.tig00000411.68 no hits & (original description: no original description) 0.8729394489742488 74 evm.model.tig00000178.94 no hits & (original description: no original description) 0.8727631479648648 72 evm.model.tig00020537.18 no hits & (original description: no original description) 0.8725245639906295 91 evm.model.tig00000367.16 no hits & (original description: no original description) 0.8722920853594489 74 evm.model.tig00021682.11 no hits & (original description: no original description) 0.8720070028200518 75 evm.model.tig00020537.42 (at5g05660 : 217.0) Encodes a homolog of the mammalian zinc finger transcription factor NF-X1.; ATNFXL2; FUNCTIONS IN: zinc ion binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, NF-X1-type (InterPro:IPR000967), Zinc finger, PHD-type, conserved site (InterPro:IPR019786); BEST Arabidopsis thaliana protein match is: NF-X-like 1 (TAIR:AT1G10170.1); Has 10412 Blast hits to 5299 proteins in 265 species: Archae - 4; Bacteria - 94; Metazoa - 8397; Fungi - 425; Plants - 250; Viruses - 11; Other Eukaryotes - 1231 (source: NCBI BLink). & (reliability: 434.0) & (original description: no original description) 0.87181244563432 76 evm.model.tig00021721.19 no hits & (original description: no original description) 0.8716574016621663 77 evm.model.tig00000361.66 no hits & (original description: no original description) 0.8708557248708735 81 evm.model.tig00021257.18 no hits & (original description: no original description) 0.8694986390965722 84 evm.model.tig00000889.14 (at3g11240 : 197.0) Encodes an arginyl-tRNA:protein arginyltransferase (ATE2), a component of the N-end rule pathway that targets protein degradation through the identity of the amino-terminal residue of specific protein substrates. Arabidopsis contains two ATE genes: At5g05700/ATE1, At3g11240/ATE2. Another component of the N-end rule pathway is At5g02310/PROTEOLYSIS6 (PRT6). PRT6 and ATE were shown to regulate seed after-ripening, seedling sugar sensitivity, seedling lipid breakdown, and abscisic acid (ABA) sensitivity of germination.; arginine-tRNA protein transferase 2 (ATE2); FUNCTIONS IN: arginyltransferase activity; INVOLVED IN: regulation of seed germination, regulation of lipid catabolic process, protein arginylation, response to abscisic acid stimulus; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Arginine-tRNA-protein transferase, N-terminal (InterPro:IPR007471), Arginine-tRNA-protein transferase 1, eukaryotic (InterPro:IPR017137), Arginine-tRNA-protein transferase, C-terminal (InterPro:IPR007472); BEST Arabidopsis thaliana protein match is: arginine-tRNA protein transferase 1 (TAIR:AT5G05700.1); Has 2270 Blast hits to 2031 proteins in 783 species: Archae - 0; Bacteria - 1438; Metazoa - 213; Fungi - 241; Plants - 48; Viruses - 0; Other Eukaryotes - 330 (source: NCBI BLink). & (reliability: 394.0) & (original description: no original description) 0.86947581399822 85 evm.model.tig00000760.19 no hits & (original description: no original description) 0.8680003344448198 90 evm.model.tig00000767.4 no hits & (original description: no original description) 0.8668700352422741 100 evm.model.tig00001258.7 no hits & (original description: no original description) 0.8649034897514202 98 evm.model.tig00021234.41 no hits & (original description: no original description) 0.8644246172226708 99 evm.model.tig00000806.16 no hits & (original description: no original description) 0.8641882942177622 100