Sequence Description Alias PCC hrr evm.model.tig00000402.71 (p46869|fla10_chlre : 269.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (at3g50240 : 211.0) Encodes a kinesin-related protein.; KICP-02; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G47820.2); Has 66961 Blast hits to 44643 proteins in 2038 species: Archae - 551; Bacteria - 6888; Metazoa - 33106; Fungi - 5668; Plants - 4311; Viruses - 105; Other Eukaryotes - 16332 (source: NCBI BLink). & (reliability: 422.0) & (original description: no original description) 0.8836271663962783 9 evm.model.tig00021036.26 no hits & (original description: no original description) 0.8835777967191728 2 evm.model.tig00000944.33 (at5g67530 : 196.0) plant U-box 49 (PUB49); FUNCTIONS IN: ubiquitin-protein ligase activity, peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding, protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), U box domain (InterPro:IPR003613), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892); BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT1G01940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 392.0) & (original description: no original description) 0.8769942157893899 10 evm.model.tig00000404.28 (at3g46290 : 195.0) Encodes HERCULES1 (HERK1), a receptor kinase regulated by Brassinosteroids and required for cell elongation during vegetative growth.; hercules receptor kinase 1 (HERK1); FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: brassinosteroid mediated signaling pathway, post-embryonic development, response to brassinosteroid stimulus, unidimensional cell growth, regulation of unidimensional cell growth; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G59700.1); Has 116300 Blast hits to 115060 proteins in 4658 species: Archae - 101; Bacteria - 13233; Metazoa - 43205; Fungi - 9848; Plants - 32844; Viruses - 378; Other Eukaryotes - 16691 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 157.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 382.0) & (original description: no original description) 0.8740042591249602 9 evm.model.tig00021502.2 (at3g49600 : 223.0) Encodes a ubiquitin-specific protease which catalyzes deubiquitination of histone H2B and is required for heterochromatin silencing.Loss of function mutations display autonomous endosperm development and embryo arrest. Loss of function also results in an increase in expression of the PcG complex target gene PHE1.; ubiquitin-specific protease 26 (UBP26); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: seed development; LOCATED IN: nucleolus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin-specific peptidase, DUSP domain (InterPro:IPR006615), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 13 (TAIR:AT3G11910.1); Has 7210 Blast hits to 6677 proteins in 263 species: Archae - 0; Bacteria - 2; Metazoa - 3696; Fungi - 1305; Plants - 848; Viruses - 3; Other Eukaryotes - 1356 (source: NCBI BLink). & (reliability: 446.0) & (original description: no original description) 0.8695439509556515 5 evm.model.tig00021013.41 (at5g14230 : 108.0) CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: XB3 ortholog 2 in Arabidopsis thaliana (TAIR:AT5G57740.1); Has 66374 Blast hits to 25358 proteins in 1201 species: Archae - 121; Bacteria - 8133; Metazoa - 29530; Fungi - 5885; Plants - 3349; Viruses - 785; Other Eukaryotes - 18571 (source: NCBI BLink). & (q8vyx2|akt1_orysa : 89.7) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (reliability: 216.0) & (original description: no original description) 0.8679182914933488 13 evm.model.tig00000123.19 (at4g19670 : 110.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, C6HC-type (InterPro:IPR002867), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT5G60250.1); Has 3330 Blast hits to 3305 proteins in 225 species: Archae - 1; Bacteria - 6; Metazoa - 1257; Fungi - 660; Plants - 920; Viruses - 0; Other Eukaryotes - 486 (source: NCBI BLink). & (reliability: 220.0) & (original description: no original description) 0.8597432941898867 7 evm.model.tig00000241.27 (at5g19610 : 149.0) GNOM-like 2 (GNL2); FUNCTIONS IN: ARF guanyl-nucleotide exchange factor activity; INVOLVED IN: pollen germination; LOCATED IN: intracellular; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: SEC7-like (InterPro:IPR000904); BEST Arabidopsis thaliana protein match is: sec7 domain-containing protein (TAIR:AT1G13980.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 298.0) & (original description: no original description) 0.8576338264429482 35 evm.model.tig00020903.43 no hits & (original description: no original description) 0.8482058531647703 45 evm.model.tig00000806.12 no hits & (original description: no original description) 0.8480836323742664 62 evm.model.tig00021168.28 (at2g33730 : 134.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G28180.1); Has 125674 Blast hits to 72393 proteins in 3317 species: Archae - 1039; Bacteria - 55089; Metazoa - 31149; Fungi - 11223; Plants - 5926; Viruses - 327; Other Eukaryotes - 20921 (source: NCBI BLink). & (reliability: 268.0) & (original description: no original description) 0.8436634076416043 18 evm.model.tig00000350.15 (at5g54260 : 369.0) DNA repair and meiotic recombination protein, component of MRE11 complex with RAD50 and NBS1; MEIOTIC RECOMBINATION 11 (MRE11); FUNCTIONS IN: hydrolase activity, manganese ion binding, protein serine/threonine phosphatase activity, exonuclease activity, endonuclease activity; INVOLVED IN: double-strand break repair, DNA metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), DNA repair exonuclease (InterPro:IPR003701), Mre11, DNA-binding (InterPro:IPR007281); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 738.0) & (original description: no original description) 0.8402113159944555 13 evm.model.tig00000073.38 no hits & (original description: no original description) 0.8372483278410725 78 evm.model.tig00021742.16 (at1g08860 : 186.0) Encodes a copine-like protein, which is a member of a newly identified class of calcium-dependent, phospholipid binding proteins that are present in a wide range of organisms. Overexpression of this gene suppresses bon1-1 phenotypes. Double mutant analyses with bon1-1 suggest that BON1 and BON3 have overlapping functions in maintaining cellular homeostasis and inhibiting cell death.; BONZAI 3 (BON3); FUNCTIONS IN: calcium-dependent phospholipid binding; INVOLVED IN: N-terminal protein myristoylation, cellular homeostasis, positive regulation of cellular defense response, negative regulation of cell death; EXPRESSED IN: sperm cell, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Copine (InterPro:IPR010734), C2 calcium-dependent membrane targeting (InterPro:IPR000008), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: DCD (Development and Cell Death) domain protein (TAIR:AT5G61910.4); Has 1559 Blast hits to 1479 proteins in 107 species: Archae - 0; Bacteria - 0; Metazoa - 903; Fungi - 12; Plants - 319; Viruses - 0; Other Eukaryotes - 325 (source: NCBI BLink). & (reliability: 372.0) & (original description: no original description) 0.8367699663173157 15 evm.model.tig00020903.17 (at2g47330 : 453.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G20920.1); Has 46798 Blast hits to 46047 proteins in 3085 species: Archae - 817; Bacteria - 24489; Metazoa - 6167; Fungi - 4661; Plants - 2616; Viruses - 11; Other Eukaryotes - 8037 (source: NCBI BLink). & (p46942|db10_nicsy : 280.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 906.0) & (original description: no original description) 0.8350328099444304 45 evm.model.tig00001038.28 no hits & (original description: no original description) 0.8341714460379698 26 evm.model.tig00000789.44 (at1g14850 : 173.0) Encodes a protein similar to nucleoporin, a a major component of the nuclear pore complex (NPC) involved in cellular nucleo-cytoplasmic transport; nucleoporin 155 (NUP155); FUNCTIONS IN: nucleocytoplasmic transporter activity; INVOLVED IN: nucleocytoplasmic transport; LOCATED IN: nucleolus, plasma membrane, chloroplast, nuclear pore; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoporin, Nup133/Nup155-like, N-terminal (InterPro:IPR014908), Nucleoporin, Nup155-like (InterPro:IPR004870), Nucleoporin, Nup133/Nup155-like, C-terminal (InterPro:IPR007187); Has 459 Blast hits to 396 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 159; Fungi - 168; Plants - 85; Viruses - 0; Other Eukaryotes - 47 (source: NCBI BLink). & (reliability: 346.0) & (original description: no original description) 0.8339684908267742 88 evm.model.tig00000852.35 no hits & (original description: no original description) 0.8329814083996896 20 evm.model.tig00000057.79 no hits & (original description: no original description) 0.8320133503928393 21 evm.model.tig00020614.7 (at5g56580 : 205.0) Encodes a member of the MAP Kinase Kinase family of proteins. It can phosphorylate MPK12 in vitro and it can be dephosphorylated by MKP2 in vitro.; MAP kinase kinase 6 (MKK6); FUNCTIONS IN: MAP kinase kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: MAP kinase kinase 2 (TAIR:AT4G29810.1); Has 125172 Blast hits to 123800 proteins in 4446 species: Archae - 151; Bacteria - 14363; Metazoa - 46867; Fungi - 12279; Plants - 30893; Viruses - 513; Other Eukaryotes - 20106 (source: NCBI BLink). & (q5qn75|m2k1_orysa : 205.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 380.0) & (original description: no original description) 0.8316618143930142 45 evm.model.tig00000204.42 no hits & (original description: no original description) 0.8316075925077481 24 evm.model.tig00000455.20 no hits & (original description: no original description) 0.8312228287688067 47 evm.model.tig00020703.4 no hits & (original description: no original description) 0.8310568678896535 26 evm.model.tig00000704.34 (at3g22980 : 385.0) Ribosomal protein S5/Elongation factor G/III/V family protein; FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, GTPase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein synthesis factor, GTP-binding (InterPro:IPR000795), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5/Elongation factor G/III/V family protein (TAIR:AT1G56070.1); Has 75542 Blast hits to 60298 proteins in 6538 species: Archae - 1481; Bacteria - 47710; Metazoa - 4520; Fungi - 3401; Plants - 1472; Viruses - 1; Other Eukaryotes - 16957 (source: NCBI BLink). & (o23755|ef2_betvu : 240.0) Elongation factor 2 (EF-2) - Beta vulgaris (Sugar beet) & (reliability: 770.0) & (original description: no original description) 0.8298050573886666 71 evm.model.tig00000076.132 (at1g48630 : 97.4) Encodes a protein with similarity to mammalian RACKs. RACKs function to shuttle activated protein kinase C to different subcellular sites and may also function as a scaffold through physical interactions with other proteins. RACK1B has no phenotype on its own and probably acts redundantly with RACK1A and RACK1C.; receptor for activated C kinase 1B (RACK1B_AT); FUNCTIONS IN: nucleotide binding; INVOLVED IN: shoot development, root development; LOCATED IN: cytosolic ribosome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: receptor for activated C kinase 1C (TAIR:AT3G18130.1); Has 89864 Blast hits to 37441 proteins in 950 species: Archae - 80; Bacteria - 10219; Metazoa - 35696; Fungi - 20361; Plants - 11462; Viruses - 9; Other Eukaryotes - 12037 (source: NCBI BLink). & (p25387|gblp_chlre : 91.7) Guanine nucleotide-binding protein subunit beta-like protein - Chlamydomonas reinhardtii & (reliability: 186.4) & (original description: no original description) 0.8290107970564378 28 evm.model.tig00000037.16 no hits & (original description: no original description) 0.8280742557411798 29 evm.model.tig00001107.6 no hits & (original description: no original description) 0.8273359881108825 88 evm.model.tig00000178.19 no hits & (original description: no original description) 0.8266588017352933 81 evm.model.tig00000737.26 no hits & (original description: no original description) 0.8253711326687879 85 evm.model.tig00020912.18 (at4g17020 : 159.0) transcription factor-related; FUNCTIONS IN: RNA polymerase II transcription factor activity; INVOLVED IN: DNA repair, regulation of transcription, DNA-dependent; LOCATED IN: endomembrane system, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor Tfb2 (InterPro:IPR004598). & (reliability: 318.0) & (original description: no original description) 0.8189248360442513 73 evm.model.tig00020911.51 no hits & (original description: no original description) 0.8186183975580319 48 evm.model.tig00020553.152 no hits & (original description: no original description) 0.8139913363579592 57 evm.model.tig00000042.151 (at5g52820 : 105.0) WD-40 repeat family protein / notchless protein, putative; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), NLE (InterPro:IPR012972), WD40 repeat (InterPro:IPR001680), G-protein, beta subunit (InterPro:IPR001632), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p25387|gblp_chlre : 95.1) Guanine nucleotide-binding protein subunit beta-like protein - Chlamydomonas reinhardtii & (reliability: 206.0) & (original description: no original description) 0.812326871089795 43 evm.model.tig00020553.231 no hits & (original description: no original description) 0.8120262769954599 45 evm.model.tig00021435.27 no hits & (original description: no original description) 0.8059941387893079 53 evm.model.tig00001154.10 (at5g51300 : 295.0) splicing factor-related; FUNCTIONS IN: RNA binding, zinc ion binding, nucleotide binding, nucleic acid binding; INVOLVED IN: RNA splicing; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087), K Homology, type 1, subgroup (InterPro:IPR018111), RNA recognition motif, RNP-1 (InterPro:IPR000504), K Homology, type 1 (InterPro:IPR004088), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT1G09660.1); Has 82686 Blast hits to 53020 proteins in 1818 species: Archae - 38; Bacteria - 8214; Metazoa - 37936; Fungi - 14163; Plants - 12444; Viruses - 1255; Other Eukaryotes - 8636 (source: NCBI BLink). & (reliability: 590.0) & (original description: no original description) 0.805576163379175 66 evm.model.tig00000076.72 (at3g63280 : 165.0) Encodes AtNek4, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes.; NIMA-related kinase 4 (NEK4); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: NIMA-related kinase 2 (TAIR:AT3G04810.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q7xka8|sapk5_orysa : 90.1) Serine/threonine-protein kinase SAPK5 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 5) - Oryza sativa (Rice) & (reliability: 320.0) & (original description: no original description) 0.8053717307082167 55 evm.model.tig00000955.17 no hits & (original description: no original description) 0.803253436918083 89 evm.model.tig00021348.29 no hits & (original description: no original description) 0.8020165019044512 57 evm.model.tig00020563.191 (at4g02570 : 445.0) Encodes a cullin that is a component of SCF ubiquitin ligase complexes involved in mediating responses to auxin and jasmonic acid. Homozygous auxin-resistant mutants arrest growth soon after germination, lacking a root and hypocotyl. Heterozygotes display a variety of phenotypes consistent with impaired auxin response.; cullin 1 (CUL1); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Cullin homology (InterPro:IPR016158), Cullin protein, neddylation domain (InterPro:IPR019559), Cullin, conserved site (InterPro:IPR016157), Cullin, N-terminal (InterPro:IPR001373), Cullin repeat-like-containing domain (InterPro:IPR016159); BEST Arabidopsis thaliana protein match is: cullin 2 (TAIR:AT1G02980.1). & (reliability: 890.0) & (original description: no original description) 0.7972457835539358 62 evm.model.tig00000704.33 (at2g46560 : 130.0) transducin family protein / WD-40 repeat family protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat (InterPro:IPR001680), RAVE protein 1 C-terminal (InterPro:IPR022033), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); Has 2273 Blast hits to 1588 proteins in 291 species: Archae - 0; Bacteria - 657; Metazoa - 469; Fungi - 690; Plants - 137; Viruses - 0; Other Eukaryotes - 320 (source: NCBI BLink). & (reliability: 260.0) & (original description: no original description) 0.7967534267706934 63 evm.model.tig00001128.19 no hits & (original description: no original description) 0.7956428707167755 78 evm.model.tig00000430.38 no hits & (original description: no original description) 0.792626341657567 65 evm.model.tig00001030.5 (at5g49930 : 226.0) embryo defective 1441 (emb1441); FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fibronectin-binding A, N-terminal (InterPro:IPR008616), Protein of unknown function DUF3441 (InterPro:IPR021846), Zinc finger, CCHC-type (InterPro:IPR001878), Protein of unknown function DUF814 (InterPro:IPR008532); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 452.0) & (original description: no original description) 0.792516639375227 66 evm.model.tig00020614.124 (at5g45140 : 199.0) Encodes a subunit of RNA polymerase III (aka RNA polymerase C).; nuclear RNA polymerase C2 (NRPC2); FUNCTIONS IN: DNA-directed RNA polymerase activity, ribonucleoside binding, DNA binding; INVOLVED IN: transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, subunit 2, domain 6 (InterPro:IPR007120), RNA polymerase Rpb2, domain 7 (InterPro:IPR007641), RNA polymerase, beta subunit, protrusion (InterPro:IPR007644), RNA polymerase Rpb2, domain 3 (InterPro:IPR007645), DNA-directed RNA polymerase, subunit 2 (InterPro:IPR015712), RNA polymerase Rpb2, domain 2 (InterPro:IPR007642), RNA polymerase Rpb2, domain 4 (InterPro:IPR007646), RNA polymerase Rpb2, domain 5 (InterPro:IPR007647), RNA polymerase, beta subunit, conserved site (InterPro:IPR007121); BEST Arabidopsis thaliana protein match is: DNA-directed RNA polymerase family protein (TAIR:AT4G21710.1); Has 31946 Blast hits to 25220 proteins in 8516 species: Archae - 496; Bacteria - 14545; Metazoa - 599; Fungi - 7189; Plants - 2320; Viruses - 240; Other Eukaryotes - 6557 (source: NCBI BLink). & (reliability: 398.0) & (original description: no original description) 0.7924166105489011 67 evm.model.tig00000704.32 no hits & (original description: no original description) 0.7921269883665398 68 evm.model.tig00020824.6 no hits & (original description: no original description) 0.7894929258508051 70 evm.model.tig00000455.21 no hits & (original description: no original description) 0.7894872662980801 71 evm.model.tig00000204.43 (at1g20920 : 534.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G09620.1); Has 45185 Blast hits to 44279 proteins in 3076 species: Archae - 794; Bacteria - 22443; Metazoa - 6674; Fungi - 4936; Plants - 2699; Viruses - 11; Other Eukaryotes - 7628 (source: NCBI BLink). & (p46942|db10_nicsy : 255.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1068.0) & (original description: no original description) 0.7891811678170431 72 evm.model.tig00001269.4 no hits & (original description: no original description) 0.788462516811985 73 evm.model.tig00020563.129 no hits & (original description: no original description) 0.7879989543210016 76 evm.model.tig00000949.31 no hits & (original description: no original description) 0.7826504173751472 84 evm.model.tig00000789.42 no hits & (original description: no original description) 0.7817694219108772 88 evm.model.tig00000388.17 no hits & (original description: no original description) 0.7798777770683168 91 evm.model.tig00020571.12 no hits & (original description: no original description) 0.778626120595576 93 evm.model.tig00000865.24 no hits & (original description: no original description) 0.7759565007608228 99