Sequence Description Alias PCC hrr evm.model.tig00020563.65 no hits & (original description: no original description) 0.9346653868325199 6 evm.model.tig00020629.139 no hits & (original description: no original description) 0.9317174207423727 2 evm.model.tig00001024.37 (at1g64790 : 87.8) ILITYHIA (ILA) is a HEAT repeat protein involved in plant immunity. The gene is also involved in systemic acquired resistance induced by P. syringae expressing avrRps4. Loss-of-function mutants of ILA caused pleiotropic defects in the mutant plants. The mutant plants are smaller in size and the leaves are serrated and yellow to light green in color.; ILITYHIA (ILA); FUNCTIONS IN: binding; INVOLVED IN: systemic acquired resistance, defense response to bacterium; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024). & (reliability: 175.6) & (original description: no original description) 0.9249417425487274 3 evm.model.tig00020892.19 no hits & (original description: no original description) 0.9220656078073426 6 evm.model.tig00000157.49 no hits & (original description: no original description) 0.9159019087728232 5 evm.model.tig00000194.25 (at3g12810 : 432.0) Encodes a protein similar to ATP-dependent, chromatin-remodeling proteins of the ISWI and SWI2/SNF2 family. Genetic analyses suggest that this gene is involved in multiple flowering pathways. Mutations in PIE1 results in suppression of FLC-mediated delay of flowering and causes early flowering in noninductive photoperiods independently of FLC. PIE1 is required for expression of FLC in the shoot apex but not in the root.Along with ARP6 forms a complex to deposit modified histone H2A.Z at several loci within the genome. This modification alters the expression of the target genes (i.e. FLC, MAF4, MAF6).; PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 (PIE1); FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; INVOLVED IN: in 6 processes; LOCATED IN: SWI/SNF complex, cell wall, chromatin remodeling complex; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: HSA (InterPro:IPR006562), HAS subgroup (InterPro:IPR013999), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), SNF2-related (InterPro:IPR000330), MYB-like (InterPro:IPR017877), SANT, DNA-binding (InterPro:IPR001005), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: INO80 ortholog (TAIR:AT3G57300.1); Has 42311 Blast hits to 26312 proteins in 2357 species: Archae - 246; Bacteria - 10217; Metazoa - 11172; Fungi - 7336; Plants - 2916; Viruses - 500; Other Eukaryotes - 9924 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 149.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 864.0) & (original description: no original description) 0.9049250946407515 35 evm.model.tig00021108.42 no hits & (original description: no original description) 0.9028817190598619 10 evm.model.tig00000404.20 no hits & (original description: no original description) 0.9026946193460739 8 evm.model.tig00021281.43 no hits & (original description: no original description) 0.89177587805703 59 evm.model.tig00000478.5 no hits & (original description: no original description) 0.8901676483031482 24 evm.model.tig00000367.50 no hits & (original description: no original description) 0.8895218727283967 68 evm.model.tig00021070.6 no hits & (original description: no original description) 0.886259065422806 83 evm.model.tig00020685.5 no hits & (original description: no original description) 0.8861354037050448 89 evm.model.tig00020849.12 no hits & (original description: no original description) 0.8861251303149592 14 evm.model.tig00020610.119 no hits & (original description: no original description) 0.8855774351231428 82 evm.model.tig00000342.32 no hits & (original description: no original description) 0.8843282134027042 38 evm.model.tig00020912.40 no hits & (original description: no original description) 0.8800349457055276 91 evm.model.tig00000808.1 no hits & (original description: no original description) 0.8792884287468685 20 evm.model.tig00020562.9 no hits & (original description: no original description) 0.8781387578544468 21 evm.model.tig00020684.58 (at5g35750 : 114.0) Encodes histidine kinase AHK2.; histidine kinase 2 (HK2); FUNCTIONS IN: osmosensor activity, cytokinin receptor activity, protein histidine kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 3 (TAIR:AT1G27320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o49230|etr1_braol : 111.0) Ethylene receptor (EC 2.7.13.3) - Brassica oleracea (Wild cabbage) & (reliability: 228.0) & (original description: no original description) 0.8748860846955188 24 evm.model.tig00000317.26 (at5g39500 : 332.0) Encodes GNOM-LIKE1/ERMO1, a member of ARF-GEF family. Required for endoplasmic reticulum (ER) morphology.; GNOM-like 1 (GNL1); FUNCTIONS IN: ARF guanyl-nucleotide exchange factor activity; INVOLVED IN: ER body organization; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SEC7-like (InterPro:IPR000904); BEST Arabidopsis thaliana protein match is: sec7 domain-containing protein (TAIR:AT1G13980.2); Has 2885 Blast hits to 2457 proteins in 243 species: Archae - 0; Bacteria - 32; Metazoa - 1491; Fungi - 682; Plants - 262; Viruses - 0; Other Eukaryotes - 418 (source: NCBI BLink). & (reliability: 664.0) & (original description: no original description) 0.8748009176219967 25 evm.model.tig00021238.17 (at5g61140 : 645.0) Encodes a predicted protein with 30% identity with MER3/RCK.; U5 small nuclear ribonucleoprotein helicase; FUNCTIONS IN: in 6 functions; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Sec63 domain (InterPro:IPR004179), Sec63 domain, subgroup (InterPro:IPR018127), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: U5 small nuclear ribonucleoprotein helicase, putative (TAIR:AT1G20960.2). & (reliability: 1290.0) & (original description: no original description) 0.87473965095888 26 evm.model.tig00000385.22 no hits & (original description: no original description) 0.8742189564898359 27 evm.model.tig00000189.23 no hits & (original description: no original description) 0.8737217226310362 28 evm.model.tig00020510.26 no hits & (original description: no original description) 0.8730606975674067 52 evm.model.tig00020572.64 no hits & (original description: no original description) 0.8727920364033358 70 evm.model.tig00021434.22 no hits & (original description: no original description) 0.8727160193748049 58 evm.model.tig00000178.36 no hits & (original description: no original description) 0.8720560277028094 34 evm.model.tig00020572.38 no hits & (original description: no original description) 0.8718780521390073 35 evm.model.tig00000147.54 no hits & (original description: no original description) 0.8718273493195613 36 evm.model.tig00000448.7 no hits & (original description: no original description) 0.8717747740745594 84 evm.model.tig00020780.17 no hits & (original description: no original description) 0.8714748236361559 38 evm.model.tig00021612.27 no hits & (original description: no original description) 0.8712273158705902 84 evm.model.tig00020610.13 (at5g35750 : 151.0) Encodes histidine kinase AHK2.; histidine kinase 2 (HK2); FUNCTIONS IN: osmosensor activity, cytokinin receptor activity, protein histidine kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 3 (TAIR:AT1G27320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q9m7m1|etr1_prupe : 122.0) Ethylene receptor (EC 2.7.13.3) - Prunus persica (Peach) & (reliability: 302.0) & (original description: no original description) 0.8676643758950424 40 evm.model.tig00000157.50 no hits & (original description: no original description) 0.8674340957793878 55 evm.model.tig00000430.67 no hits & (original description: no original description) 0.8668600467615786 98 evm.model.tig00000056.31 no hits & (original description: no original description) 0.866838399751169 51 evm.model.tig00001545.4 no hits & (original description: no original description) 0.8654088332972047 46 evm.model.tig00000158.22 (at3g02260 : 604.0) Calossin-like protein required for polar auxin transport; BIG (BIG); FUNCTIONS IN: ubiquitin-protein ligase activity, binding, zinc ion binding; INVOLVED IN: response to auxin stimulus, indeterminate inflorescence morphogenesis, photomorphogenesis, root development, auxin polar transport; LOCATED IN: membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Zinc finger, N-recognin, metazoa (InterPro:IPR013993), Armadillo-type fold (InterPro:IPR016024), Zinc finger, ZZ-type (InterPro:IPR000433), Zinc finger, N-recognin (InterPro:IPR003126); Has 1182 Blast hits to 997 proteins in 123 species: Archae - 0; Bacteria - 4; Metazoa - 768; Fungi - 44; Plants - 189; Viruses - 0; Other Eukaryotes - 177 (source: NCBI BLink). & (reliability: 1208.0) & (original description: no original description) 0.8651299350466998 75 evm.model.tig00000334.5 no hits & (original description: no original description) 0.8634370603498416 49 evm.model.tig00000076.26 no hits & (original description: no original description) 0.8634198996483146 57 evm.model.tig00020553.254 no hits & (original description: no original description) 0.8631859102859796 83 evm.model.tig00000788.1 no hits & (original description: no original description) 0.863000291865518 63 evm.model.tig00000553.32 no hits & (original description: no original description) 0.8612551714418605 54 evm.model.tig00021014.10 (at5g22750 : 175.0) DNA repair gene. gamma-radiation hypersensitive (RAD5) involved in stable transformation and T-DNA transfer; RAD5; FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA mediated transformation; EXPRESSED IN: embryo, sperm cell, seed; EXPRESSED DURING: E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), HIP116, Rad5p N-terminal (InterPro:IPR014905), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Helicase protein with RING/U-box domain (TAIR:AT5G43530.1); Has 27107 Blast hits to 18179 proteins in 1771 species: Archae - 108; Bacteria - 7266; Metazoa - 8140; Fungi - 5089; Plants - 2446; Viruses - 173; Other Eukaryotes - 3885 (source: NCBI BLink). & (reliability: 350.0) & (original description: no original description) 0.8612238082888604 55 evm.model.tig00000670.32 no hits & (original description: no original description) 0.8607578774379212 56 evm.model.tig00000053.4 (at2g19120 : 139.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G30100.1); Has 5930 Blast hits to 5690 proteins in 1157 species: Archae - 188; Bacteria - 1788; Metazoa - 1227; Fungi - 954; Plants - 650; Viruses - 225; Other Eukaryotes - 898 (source: NCBI BLink). & (reliability: 278.0) & (original description: no original description) 0.860153573828149 57 evm.model.tig00021036.109 no hits & (original description: no original description) 0.8591689093260533 59 evm.model.tig00021348.25 (at3g08850 : 521.0) Encodes one of two Arabidopsis RAPTOR/KOG1 homologs. RAPTOR proteins are binding partners of the target of rapamycin kinase that is present in all eukaryotes and play a central role in the stimulation of cell growth and metabolism in response to nutrients. Mutants show embryo lethal phenotype which occurs at pre-globular stage. May interact with TOR kinase in a rapamycin like signaling pathway. Interacts with TOR and S6K1 in vivo. Overexpression of RAPTOR1 rendered the S6K1 osmotic stress insensitive.; RAPTOR1; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), WD40 repeat (InterPro:IPR001680), Regulatory associated protein of TOR (InterPro:IPR004083), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Armadillo-type fold (InterPro:IPR016024), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: HEAT repeat ;WD domain, G-beta repeat protein protein (TAIR:AT5G01770.1); Has 7799 Blast hits to 6065 proteins in 379 species: Archae - 2; Bacteria - 1590; Metazoa - 2741; Fungi - 1618; Plants - 862; Viruses - 0; Other Eukaryotes - 986 (source: NCBI BLink). & (reliability: 1012.0) & (original description: no original description) 0.8584594659168852 73 evm.model.tig00020944.35 (at4g03550 : 160.0) Encodes a callose synthase that is required for wound and papillary callose formation in response to fungal pathogens Erysiphe and Blumeria. Mutants are resistant to P. parasitica and exhibit an exaggerated PR1 response.Contributes to PAMP-induced basal defense.; glucan synthase-like 5 (GSL05); FUNCTIONS IN: transferase activity, transferring glycosyl groups, 1,3-beta-glucan synthase activity; INVOLVED IN: in 12 processes; LOCATED IN: 1,3-beta-glucan synthase complex, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440); BEST Arabidopsis thaliana protein match is: glucan synthase-like 1 (TAIR:AT4G04970.1); Has 1221 Blast hits to 894 proteins in 155 species: Archae - 2; Bacteria - 0; Metazoa - 0; Fungi - 695; Plants - 448; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (reliability: 320.0) & (original description: no original description) 0.8583366592853477 76 evm.model.tig00020951.33 no hits & (original description: no original description) 0.8569499236035009 66 evm.model.tig00020563.91 no hits & (original description: no original description) 0.8568101707501474 67 evm.model.tig00000237.19 no hits & (original description: no original description) 0.8565166752383201 69 evm.model.tig00000093.196 no hits & (original description: no original description) 0.8564206121922373 70 evm.model.tig00020660.47 (at2g28315 : 140.0) Nucleotide/sugar transporter family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT1G06890.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q9m7m1|etr1_prupe : 111.0) Ethylene receptor (EC 2.7.13.3) - Prunus persica (Peach) & (reliability: 280.0) & (original description: no original description) 0.8549260076145655 86 evm.model.tig00020554.137 no hits & (original description: no original description) 0.8548958278474396 75 evm.model.tig00000254.3 no hits & (original description: no original description) 0.8540188528297215 76 evm.model.tig00021038.87 no hits & (original description: no original description) 0.8536205005646235 77 evm.model.tig00021127.54 no hits & (original description: no original description) 0.8528021211957081 81 evm.model.tig00020830.45 no hits & (original description: no original description) 0.8521999235304402 82 evm.model.tig00000113.125 no hits & (original description: no original description) 0.8507100872585018 84 evm.model.tig00000073.17 no hits & (original description: no original description) 0.850416393479642 85 evm.model.tig00000655.62 no hits & (original description: no original description) 0.8490652984760734 88 evm.model.tig00000042.92 no hits & (original description: no original description) 0.8490596705341151 89 evm.model.tig00021462.22 no hits & (original description: no original description) 0.8481469319443117 91 evm.model.tig00020553.107 no hits & (original description: no original description) 0.8471018608645277 93 evm.model.tig00000145.25 (at1g66340 : 80.9) Similar to prokaryote sensory transduction proteins. Contains a histidine kinase and a response regulator domain. Homodimer. Membrane component. Binds ethylene. Mutations affect ethylene binding and metabolism of other plant hormones such as auxin, cytokinins, ABA and gibberellic acid. Ethylene receptor. Has histidine kinase activity. Is regulated by RTE1.; ETHYLENE RESPONSE 1 (ETR1); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), Signal transduction histidine kinase, core (InterPro:IPR005467), Signal transduction histidine kinase, hybrid-type, ethylene sensor (InterPro:IPR014525), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), GAF (InterPro:IPR003018), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: ethylene response sensor 1 (TAIR:AT2G40940.1); Has 102721 Blast hits to 98263 proteins in 3046 species: Archae - 757; Bacteria - 90102; Metazoa - 18; Fungi - 1611; Plants - 2314; Viruses - 21; Other Eukaryotes - 7898 (source: NCBI BLink). & (reliability: 161.8) & (original description: no original description) 0.8449658917420811 99 evm.model.tig00020912.104 no hits & (original description: no original description) 0.8448251912448996 100