Sequence Description Alias PCC hrr evm.model.tig00000767.1 no hits & (original description: no original description) 0.8750352014429178 70 evm.model.tig00021098.35 no hits & (original description: no original description) 0.8713967963795336 9 evm.model.tig00001718.3 (at5g57160 : 184.0) Encodes the Arabidopsis orthologue of the yeast and mammalian DNA ligase IV. Involved in the repair of DNA damage but, unlike in yeast, not required for T-DNA integration. Interacts with the Arabidopsis homologue of XRCC4.; ATLIG4; FUNCTIONS IN: protein binding, DNA ligase (ATP) activity; INVOLVED IN: double-strand break repair, response to X-ray, response to DNA damage stimulus; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA ligase, N-terminal (InterPro:IPR012308), ATP dependent DNA ligase, central (InterPro:IPR012310), ATP dependent DNA ligase, C-terminal (InterPro:IPR012309), ATP-dependent DNA ligase, conserved site (InterPro:IPR016059), ATP-dependent DNA ligase (InterPro:IPR000977), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: DNA ligase 1 (TAIR:AT1G08130.1); Has 7656 Blast hits to 6618 proteins in 1076 species: Archae - 317; Bacteria - 1869; Metazoa - 2250; Fungi - 907; Plants - 304; Viruses - 214; Other Eukaryotes - 1795 (source: NCBI BLink). & (q7x7e9|dnl4_orysa : 96.7) Putative DNA ligase 4 (EC 6.5.1.1) (DNA ligase IV) (Polydeoxyribonucleotide synthase [ATP] 4) - Oryza sativa (Rice) & (reliability: 368.0) & (original description: no original description) 0.861245192731938 35 evm.model.tig00000142.15 no hits & (original description: no original description) 0.8512540709197629 12 evm.model.tig00000718.60 no hits & (original description: no original description) 0.8471834183670509 64 evm.model.tig00000545.37 no hits & (original description: no original description) 0.8464395549795426 98 evm.model.tig00021760.5 no hits & (original description: no original description) 0.8463307445857106 16 evm.model.tig00020830.23 no hits & (original description: no original description) 0.8417694478190382 94 evm.model.tig00000128.18 no hits & (original description: no original description) 0.8359351072195815 98 evm.model.tig00000802.33 no hits & (original description: no original description) 0.8331708956514579 25 evm.model.tig00000789.50 no hits & (original description: no original description) 0.8314895460195866 88 evm.model.tig00020603.91 no hits & (original description: no original description) 0.8239830167849644 49 evm.model.tig00000480.53 no hits & (original description: no original description) 0.8229424662381544 38 evm.model.tig00020614.7 (at5g56580 : 205.0) Encodes a member of the MAP Kinase Kinase family of proteins. It can phosphorylate MPK12 in vitro and it can be dephosphorylated by MKP2 in vitro.; MAP kinase kinase 6 (MKK6); FUNCTIONS IN: MAP kinase kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: MAP kinase kinase 2 (TAIR:AT4G29810.1); Has 125172 Blast hits to 123800 proteins in 4446 species: Archae - 151; Bacteria - 14363; Metazoa - 46867; Fungi - 12279; Plants - 30893; Viruses - 513; Other Eukaryotes - 20106 (source: NCBI BLink). & (q5qn75|m2k1_orysa : 205.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 380.0) & (original description: no original description) 0.8201073524438406 76 evm.model.tig00020553.50 no hits & (original description: no original description) 0.8190622862053518 46 evm.model.tig00000802.10 (at3g45240 : 156.0) Encodes a geminivirus Rep interacting kinase (GRIK; GRIK1/AT3G45240, GRIK2/AT5G60550). GRIKs are SnRK1 (SNF1-related kinases) activating kinases. Both GRIKs specifically bind to the SnRK1 catalytic subunit and phosphorylate the equivalent threonine residue in its activation loop in vitro.; geminivirus rep interacting kinase 1 (GRIK1); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Calcium/calmodulin-dependent protein kinase kinase (InterPro:IPR020657), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: geminivirus rep interacting kinase 2 (TAIR:AT5G60550.1). & (q6x4a2|cipk1_orysa : 139.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 312.0) & (original description: no original description) 0.8182616247019332 98 evm.model.tig00000605.6 no hits & (original description: no original description) 0.8159820412167853 67 evm.model.tig00020563.91 no hits & (original description: no original description) 0.8152615841171131 98 evm.model.tig00021238.20 no hits & (original description: no original description) 0.811155995648272 97 evm.model.tig00000792.32 (at4g31150 : 141.0) endonuclease V family protein; FUNCTIONS IN: endonuclease activity; INVOLVED IN: DNA repair; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Endonuclease V (InterPro:IPR007581); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 282.0) & (original description: no original description) 0.8047762062864156 88 evm.model.tig00020710.15 no hits & (original description: no original description) 0.8007761186329792 99 evm.model.tig00001208.22 no hits & (original description: no original description) 0.797894970425183 100