Sequence Description Alias PCC hrr evm.model.tig00020938.3 no hits & (original description: no original description) 0.8359555215491992 2 evm.model.tig00000269.79 no hits & (original description: no original description) 0.8144461139015325 20 evm.model.tig00000767.18 no hits & (original description: no original description) 0.7930758125071511 4 evm.model.tig00000269.78 no hits & (original description: no original description) 0.7908606317061163 27 evm.model.tig00021072.15 no hits & (original description: no original description) 0.7822581530798709 24 evm.model.tig00020675.59 no hits & (original description: no original description) 0.7821029761250878 48 evm.model.tig00000310.14 no hits & (original description: no original description) 0.7767993114819775 39 evm.model.tig00020539.45 no hits & (original description: no original description) 0.7758877280810873 24 evm.model.tig00000269.82 no hits & (original description: no original description) 0.7742175650578412 33 evm.model.tig00000269.81 no hits & (original description: no original description) 0.7715663517819825 55 evm.model.tig00000955.30 no hits & (original description: no original description) 0.7636515645604066 45 evm.model.tig00020563.7 (at5g35410 : 142.0) encodes a member of the CBL-interacting protein kinase family, is a regulatory component controlling plant potassium nutrition; SALT OVERLY SENSITIVE 2 (SOS2); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 8 (TAIR:AT4G24400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 131.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 284.0) & (original description: no original description) 0.7627583646384928 78 evm.model.tig00020616.36 no hits & (original description: no original description) 0.7549180111355196 55 evm.model.tig00020911.27 (at2g01730 : 505.0) a homolog of cleavage and polyadenylation specificity factor that plays an essential role in the development of female gametophyte and embryo; cleavage and polyadenylation specificity factor 73 kDa subunit-II (CPSF73-II); CONTAINS InterPro DOMAIN/s: RNA-metabolising metallo-beta-lactamase (InterPro:IPR011108), Beta-Casp domain (InterPro:IPR022712), Beta-lactamase-like (InterPro:IPR001279); BEST Arabidopsis thaliana protein match is: cleavage and polyadenylation specificity factor 73-I (TAIR:AT1G61010.3); Has 5072 Blast hits to 5039 proteins in 1435 species: Archae - 491; Bacteria - 2753; Metazoa - 569; Fungi - 259; Plants - 193; Viruses - 0; Other Eukaryotes - 807 (source: NCBI BLink). & (q652p4|cpsf2_orysa : 149.0) Cleavage and polyadenylation specificity factor 100 kDa subunit (CPSF 100 kDa subunit) - Oryza sativa (Rice) & (reliability: 1010.0) & (original description: no original description) 0.7478366764328483 16 evm.model.tig00000157.87 no hits & (original description: no original description) 0.7477839722620699 25 evm.model.tig00021435.20 no hits & (original description: no original description) 0.7475647811274299 18 evm.model.tig00020554.10 (at5g45140 : 788.0) Encodes a subunit of RNA polymerase III (aka RNA polymerase C).; nuclear RNA polymerase C2 (NRPC2); FUNCTIONS IN: DNA-directed RNA polymerase activity, ribonucleoside binding, DNA binding; INVOLVED IN: transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, subunit 2, domain 6 (InterPro:IPR007120), RNA polymerase Rpb2, domain 7 (InterPro:IPR007641), RNA polymerase, beta subunit, protrusion (InterPro:IPR007644), RNA polymerase Rpb2, domain 3 (InterPro:IPR007645), DNA-directed RNA polymerase, subunit 2 (InterPro:IPR015712), RNA polymerase Rpb2, domain 2 (InterPro:IPR007642), RNA polymerase Rpb2, domain 4 (InterPro:IPR007646), RNA polymerase Rpb2, domain 5 (InterPro:IPR007647), RNA polymerase, beta subunit, conserved site (InterPro:IPR007121); BEST Arabidopsis thaliana protein match is: DNA-directed RNA polymerase family protein (TAIR:AT4G21710.1); Has 31946 Blast hits to 25220 proteins in 8516 species: Archae - 496; Bacteria - 14545; Metazoa - 599; Fungi - 7189; Plants - 2320; Viruses - 240; Other Eukaryotes - 6557 (source: NCBI BLink). & (q85bw1|rpob_antfo : 189.0) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta) (RNA polymerase subunit beta) - Anthoceros formosae (Hornwort) & (reliability: 1576.0) & (original description: no original description) 0.743098110052701 19 evm.model.tig00000269.80 no hits & (original description: no original description) 0.7414878795328789 58 evm.model.tig00000133.10 no hits & (original description: no original description) 0.7403215612695979 36 evm.model.tig00021489.5 no hits & (original description: no original description) 0.7389201666091346 24 evm.model.tig00021433.25 (at3g57330 : 682.0) autoinhibited Ca2+-ATPase 11 (ACA11); FUNCTIONS IN: calcium-transporting ATPase activity, calmodulin binding; INVOLVED IN: defense response to bacterium, negative regulation of programmed cell death, anion homeostasis; LOCATED IN: plant-type vacuole membrane, chloroplast, plasma membrane, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting, PMCA-type (InterPro:IPR006408), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068); BEST Arabidopsis thaliana protein match is: autoinhibited Ca(2+)-ATPase, isoform 4 (TAIR:AT2G41560.1); Has 45492 Blast hits to 34566 proteins in 3220 species: Archae - 840; Bacteria - 31068; Metazoa - 4067; Fungi - 2704; Plants - 2054; Viruses - 3; Other Eukaryotes - 4756 (source: NCBI BLink). & (q2qmx9|aca1_orysa : 642.0) Calcium-transporting ATPase 1, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 1) (Plastid envelope ATPase 1) - Oryza sativa (Rice) & (reliability: 1364.0) & (original description: no original description) 0.7356468544564673 26 evm.model.tig00020531.26 no hits & (original description: no original description) 0.7318929578219603 58 evm.model.tig00020553.29 no hits & (original description: no original description) 0.7316705059540201 78 evm.model.tig00000042.175 no hits & (original description: no original description) 0.7303326656367556 49 evm.model.tig00020807.8 no hits & (original description: no original description) 0.7290968811940373 31 evm.model.tig00000788.8 no hits & (original description: no original description) 0.7260864180220842 71 evm.model.tig00021374.5 no hits & (original description: no original description) 0.7250363603796166 39 evm.model.tig00000383.24 no hits & (original description: no original description) 0.7179605436487995 47 evm.model.tig00020531.24 no hits & (original description: no original description) 0.7160480969522722 92 evm.model.tig00000796.9 no hits & (original description: no original description) 0.7121459194824699 49 evm.model.tig00001027.17 no hits & (original description: no original description) 0.711104252388357 78 evm.model.tig00000737.21 no hits & (original description: no original description) 0.7090958498879968 60 evm.model.tig00020964.20 no hits & (original description: no original description) 0.7075741443235255 47 evm.model.tig00000788.7 no hits & (original description: no original description) 0.7055882057847923 73 evm.model.tig00020938.4 no hits & (original description: no original description) 0.7048311102110765 49 evm.model.tig00000444.3 no hits & (original description: no original description) 0.7008775519325242 53 evm.model.tig00001336.6 no hits & (original description: no original description) 0.7006492298563054 54 evm.model.tig00020944.11 no hits & (original description: no original description) 0.6998406808617607 72 evm.model.tig00020904.61 no hits & (original description: no original description) 0.6987736687352503 58 evm.model.tig00020904.138 no hits & (original description: no original description) 0.6967690568597124 62 evm.model.tig00000113.77 no hits & (original description: no original description) 0.6966022924918881 64 evm.model.tig00000488.10 (at1g43860 : 238.0) sequence-specific DNA binding transcription factors; CONTAINS InterPro DOMAIN/s: Ribosome maturation protein SBDS, C-terminal (InterPro:IPR018978), Ribosome maturation protein SBDS (InterPro:IPR002140), Ribosome maturation protein SBDS, N-terminal (InterPro:IPR019783), Ribosome maturation protein SBDS, conserved site (InterPro:IPR018023); Has 1053 Blast hits to 1042 proteins in 349 species: Archae - 219; Bacteria - 2; Metazoa - 264; Fungi - 287; Plants - 65; Viruses - 0; Other Eukaryotes - 216 (source: NCBI BLink). & (reliability: 476.0) & (original description: no original description) 0.6947356828756066 66 evm.model.tig00020918.7 (at4g17895 : 114.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 20 (UBP20); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 21 (TAIR:AT5G46740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 228.0) & (original description: no original description) 0.6934297963308735 87 evm.model.tig00000949.17 (at5g41360 : 573.0) Encodes XPB2, a DNA repair protein and transcription factor. Arabidopsis thaliana has duplicated XPB gene (AtXPB1 and AtXPB2, with high similarity to each other). XPB proteins are involved in both DNA repair and transcription, they are component of the transcription factor IIH (TFIIH) and are responsible for DNA helicase activity during nucleotide (nt) excision repair (NER). Complementation assays in yeast rad25 mutant strains suggest the involvement of AtXPB2 in DNA repair. Although both genes are expressed in a constitutive manner during the plant life cycle, Northern blot analyses suggest that light modulates the expression level of both XPB copies.; homolog of Xeroderma pigmentosum complementation group B 2 (XPB2); FUNCTIONS IN: in 7 functions; INVOLVED IN: response to UV-B, N-terminal protein myristoylation; EXPRESSED IN: whole plant; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), DEAD-like helicase, N-terminal (InterPro:IPR014001), Xeroderma pigmentosum group B protein (XP-B) (InterPro:IPR001161), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: homolog of xeroderma pigmentosum complementation group B 1 (TAIR:AT5G41370.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1146.0) & (original description: no original description) 0.6900448585588557 89 evm.model.tig00020710.31 no hits & (original description: no original description) 0.6883113676081454 82 evm.model.tig00021036.24 no hits & (original description: no original description) 0.6784617375914568 94 evm.model.tig00000663.14 no hits & (original description: no original description) 0.6777053949408104 96