Sequence Description Alias PCC hrr evm.model.tig00020909.45 no hits & (original description: no original description) 0.9615385209321099 3 evm.model.tig00000217.37 no hits & (original description: no original description) 0.946336072889542 4 evm.model.tig00020537.65 (q5z987|atr_orysa : 139.0) Serine/threonine-protein kinase ATR (EC 2.7.11.1) - Oryza sativa (Rice) & (at5g40820 : 127.0) Encodes a Arabidopsis ortholog of the ATR protein kinase that is involved in a wide range of responses to DNA damage and plays a central role in cell-cycle regulation. Dominant loss of function alleles identified as suppressors of ALS also exhibit increased tolerance to aluminum. This may be due to the inhibition of terminal differentiation of the root apex upon exposure to Al.; Ataxia telangiectasia-mutated and RAD3-related (ATR); FUNCTIONS IN: protein serine/threonine kinase activity, inositol or phosphatidylinositol kinase activity, binding, phosphotransferase activity, alcohol group as acceptor; INVOLVED IN: in 9 processes; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403), UME (InterPro:IPR012993), Protein kinase-like domain (InterPro:IPR011009), PIK-related kinase, FAT (InterPro:IPR003151), Armadillo-type fold (InterPro:IPR016024), PIK-related kinase (InterPro:IPR014009), Phosphatidylinositol 3/4-kinase, conserved site (InterPro:IPR018936), PIK-related kinase, FATC (InterPro:IPR003152); BEST Arabidopsis thaliana protein match is: ataxia-telangiectasia mutated (TAIR:AT3G48190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 254.0) & (original description: no original description) 0.9457889482706354 3 evm.model.tig00021013.29 no hits & (original description: no original description) 0.9385911583640099 4 evm.model.tig00001299.4 no hits & (original description: no original description) 0.9337621568901691 5 evm.model.tig00020909.44 no hits & (original description: no original description) 0.9316172874709504 6 evm.model.tig00001098.15 (at2g38770 : 650.0) EMBRYO DEFECTIVE 2765 (EMB2765); LOCATED IN: plasma membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: RNA helicase, putative (TAIR:AT5G47010.1); Has 4121 Blast hits to 3614 proteins in 689 species: Archae - 125; Bacteria - 655; Metazoa - 959; Fungi - 1056; Plants - 630; Viruses - 0; Other Eukaryotes - 696 (source: NCBI BLink). & (reliability: 1300.0) & (original description: no original description) 0.9233839862702816 13 evm.model.tig00020943.88 (q9mbf8|dyh1b_chlre : 669.0) Dynein-1-beta heavy chain, flagellar inner arm I1 complex (1-beta DHC) (Dynein-1, subspecies f) - Chlamydomonas reinhardtii & (at2g40570 : 194.0) initiator tRNA phosphoribosyl transferase family protein; FUNCTIONS IN: transferase activity, transferring pentosyl groups; INVOLVED IN: regulation of translation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Initiator tRNA phosphoribosyl transferase (InterPro:IPR007306), tRNA A64-2'-O-ribosylphosphate transferase, RIT1 (InterPro:IPR016519); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 388.0) & (original description: no original description) 0.9233433720813241 8 evm.model.tig00000241.15 (at4g35800 : 1627.0) Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase II; the ortholog of budding yeast RPB1 and a homolog of the E. coli RNA polymerase beta prime subunit.; RNA polymerase II large subunit (NRPB1); FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription, transcription from RNA polymerase II promoter; LOCATED IN: nucleus, chloroplast, DNA-directed RNA polymerase II, core complex, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase II, heptapeptide repeat, eukaryotic (InterPro:IPR000684), RNA polymerase Rpb1, domain 7 (InterPro:IPR007073), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080), RNA polymerase Rpb1, domain 4 (InterPro:IPR007083), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081), RNA polymerase Rpb1, domain 6 (InterPro:IPR007075); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase C1 (TAIR:AT5G60040.1); Has 181834 Blast hits to 82224 proteins in 9254 species: Archae - 731; Bacteria - 33255; Metazoa - 56600; Fungi - 34284; Plants - 19037; Viruses - 3576; Other Eukaryotes - 34351 (source: NCBI BLink). & (q9tl05|rpoc1_nepol : 127.0) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase beta' subunit) (RNA polymerase beta' subunit) - Nephroselmis olivacea & (reliability: 3254.0) & (original description: no original description) 0.9231427319697575 9 evm.model.tig00000865.28 (at1g20960 : 1091.0) embryo defective 1507 (emb1507); FUNCTIONS IN: in 6 functions; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Sec63 domain (InterPro:IPR004179), Sec63 domain, subgroup (InterPro:IPR018127), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: U5 small nuclear ribonucleoprotein helicase (TAIR:AT2G42270.1). & (reliability: 2182.0) & (original description: no original description) 0.9203127465892835 12 evm.model.tig00001206.28 (original description: no original description) 0.9177420056573113 29 evm.model.tig00000169.15 (original description: no original description) 0.9176379673356047 13 evm.model.tig00000194.26 (at3g12810 : 251.0) Encodes a protein similar to ATP-dependent, chromatin-remodeling proteins of the ISWI and SWI2/SNF2 family. Genetic analyses suggest that this gene is involved in multiple flowering pathways. Mutations in PIE1 results in suppression of FLC-mediated delay of flowering and causes early flowering in noninductive photoperiods independently of FLC. PIE1 is required for expression of FLC in the shoot apex but not in the root.Along with ARP6 forms a complex to deposit modified histone H2A.Z at several loci within the genome. This modification alters the expression of the target genes (i.e. FLC, MAF4, MAF6).; PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 (PIE1); FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; INVOLVED IN: in 6 processes; LOCATED IN: SWI/SNF complex, cell wall, chromatin remodeling complex; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: HSA (InterPro:IPR006562), HAS subgroup (InterPro:IPR013999), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), SNF2-related (InterPro:IPR000330), MYB-like (InterPro:IPR017877), SANT, DNA-binding (InterPro:IPR001005), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: INO80 ortholog (TAIR:AT3G57300.1); Has 42311 Blast hits to 26312 proteins in 2357 species: Archae - 246; Bacteria - 10217; Metazoa - 11172; Fungi - 7336; Plants - 2916; Viruses - 500; Other Eukaryotes - 9924 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 143.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 502.0) & (original description: no original description) 0.9148765579233625 13 evm.model.tig00000093.137 (at1g80070 : 3340.0) a genetic locus involved in embryogenesis. Mutations in this locus result in an abnormal suspensor and embryo lethality.; ABNORMAL SUSPENSOR 2 (SUS2); INVOLVED IN: nuclear mRNA splicing, via spliceosome; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555), Pre-mRNA-processing-splicing factor 8, U5-snRNA-binding (InterPro:IPR019581), Pre-mRNA-processing-splicing factor 8 (InterPro:IPR012591), PROCN (InterPro:IPR012592), Pre-mRNA-processing-splicing factor 8, U6-snRNA-binding (InterPro:IPR019580), PRP8 domain IV core (InterPro:IPR021983), PRO, C-terminal (InterPro:IPR012984), RNA recognition motif, spliceosomal PrP8 (InterPro:IPR019582); BEST Arabidopsis thaliana protein match is: Pre-mRNA-processing-splicing factor (TAIR:AT4G38780.1); Has 828 Blast hits to 729 proteins in 312 species: Archae - 0; Bacteria - 2; Metazoa - 333; Fungi - 220; Plants - 69; Viruses - 2; Other Eukaryotes - 202 (source: NCBI BLink). & (reliability: 6680.0) & (original description: no original description) 0.9146962263309697 20 evm.model.tig00020531.11 no hits & (original description: no original description) 0.9145195978315731 15 evm.model.tig00001017.3 no hits & (original description: no original description) 0.9144244931071124 17 evm.model.tig00000144.152 (at1g62020 : 592.0) Coatomer, alpha subunit; FUNCTIONS IN: structural molecule activity, transporter activity; INVOLVED IN: intracellular protein transport, vesicle-mediated transport, ER to Golgi vesicle-mediated transport; LOCATED IN: COPI vesicle coat, plasma membrane, CUL4 RING ubiquitin ligase complex, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Coatomer, WD associated region (InterPro:IPR006692), WD40 repeat, conserved site (InterPro:IPR019775), Cytochrome cd1-nitrite reductase-like, C-terminal haem d1 (InterPro:IPR011048), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Coatomer, alpha subunit (InterPro:IPR016391), WD40 repeat, subgroup (InterPro:IPR019781), Coatomer, alpha subunit, C-terminal (InterPro:IPR010714); BEST Arabidopsis thaliana protein match is: Coatomer, alpha subunit (TAIR:AT2G21390.1); Has 77998 Blast hits to 29937 proteins in 781 species: Archae - 58; Bacteria - 8535; Metazoa - 32327; Fungi - 16718; Plants - 10020; Viruses - 0; Other Eukaryotes - 10340 (source: NCBI BLink). & (p93107|pf20_chlre : 94.7) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 1184.0) & (original description: no original description) 0.9112019775393589 17 evm.model.tig00000042.100 (original description: no original description) 0.9105265323628504 18 evm.model.tig00000178.39 no hits & (original description: no original description) 0.9090992931437362 19 evm.model.tig00020556.87 no hits & (original description: no original description) 0.9085049641520455 20 evm.model.tig00000431.20 no hits & (original description: no original description) 0.9061947900566496 21 evm.model.tig00000912.21 no hits & (original description: no original description) 0.9052929121475736 22 evm.model.tig00001373.5 no hits & (original description: no original description) 0.905114799768256 23 evm.model.tig00000581.7 no hits & (original description: no original description) 0.9047389888052957 24 evm.model.tig00021537.68 (at2g17930 : 373.0) Phosphatidylinositol 3- and 4-kinase family protein with FAT domain; FUNCTIONS IN: inositol or phosphatidylinositol kinase activity, binding, phosphotransferase activity, alcohol group as acceptor; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403), PIK-related kinase, FAT (InterPro:IPR003151), PIK-related kinase (InterPro:IPR014009), Armadillo-type fold (InterPro:IPR016024), PIK-related kinase, FATC (InterPro:IPR003152), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: phosphotransferases, alcohol group as acceptor;binding;inositol or phosphatidylinositol kinases (TAIR:AT4G36080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 746.0) & (original description: no original description) 0.9040769681823659 25 evm.model.tig00021760.3 (at1g08600 : 223.0) ATRX; FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: homolog of RAD54 (TAIR:AT3G19210.1). & (reliability: 446.0) & (original description: no original description) 0.9026355046191974 26 evm.model.tig00000142.7 (original description: no original description) 0.9018557787468015 27 evm.model.tig00000217.12 no hits & (original description: no original description) 0.9007545829321292 28 evm.model.tig00000145.14 no hits & (original description: no original description) 0.8983947484079042 30 evm.model.tig00020531.34 no hits & (original description: no original description) 0.8967193971657385 31 evm.model.tig00001206.27 (original description: no original description) 0.8966139379114161 32 evm.model.tig00000431.18 (at1g06490 : 158.0) encodes a gene similar to callose synthase; glucan synthase-like 7 (GSL07); FUNCTIONS IN: transferase activity, transferring glycosyl groups, 1,3-beta-glucan synthase activity; INVOLVED IN: 1,3-beta-glucan biosynthetic process; LOCATED IN: 1,3-beta-glucan synthase complex, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440); BEST Arabidopsis thaliana protein match is: glucan synthase-like 11 (TAIR:AT3G59100.1); Has 1279 Blast hits to 924 proteins in 155 species: Archae - 0; Bacteria - 2; Metazoa - 9; Fungi - 711; Plants - 489; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink). & (reliability: 316.0) & (original description: no original description) 0.8949022419032815 33 evm.model.tig00020556.28 no hits & (original description: no original description) 0.8934361784226748 34 evm.model.tig00000158.13 (at4g18130 : 197.0) member of Histidine Kinase; phytochrome E (PHYE); FUNCTIONS IN: protein histidine kinase activity, G-protein coupled photoreceptor activity, signal transducer activity; INVOLVED IN: in 8 processes; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phytochrome, central region (InterPro:IPR013515), Signal transduction histidine kinase, core (InterPro:IPR005467), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), Phytochrome chromophore attachment domain (InterPro:IPR016132), ATPase-like, ATP-binding domain (InterPro:IPR003594), PAS fold-2 (InterPro:IPR013654), Phytochrome A/B/C/D/E (InterPro:IPR012129), Phytochrome (InterPro:IPR001294), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Phytochrome chromophore binding site (InterPro:IPR013516), GAF (InterPro:IPR003018); BEST Arabidopsis thaliana protein match is: phytochrome B (TAIR:AT2G18790.1); Has 25391 Blast hits to 25044 proteins in 3724 species: Archae - 289; Bacteria - 19481; Metazoa - 8; Fungi - 476; Plants - 4006; Viruses - 9; Other Eukaryotes - 1122 (source: NCBI BLink). & (p36505|phy1_phypa : 194.0) Phytochrome 1 - Physcomitrella patens (Moss) & (reliability: 394.0) & (original description: no original description) 0.893158795614011 35 evm.model.tig00000237.19 no hits & (original description: no original description) 0.8929891608154547 36 evm.model.tig00021352.49 (at3g28430 : 216.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function FPL (InterPro:IPR019155); Has 243 Blast hits to 233 proteins in 101 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 432.0) & (original description: no original description) 0.8922466105160773 37 evm.model.tig00001042.25 no hits & (original description: no original description) 0.8921450572352475 38 evm.model.tig00020848.61 0.8918149026382771 39 evm.model.tig00020554.37 (at4g38600 : 309.0) encodes a member of HECT ubiquitin protein ligase family that is involved in trichome cell morphogenesis. Mutants in this gene exhibit supernumerary trichome branches and increased DNA content.; KAKTUS (KAK); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: trichome branching, DNA endoreduplication; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024), HECT (InterPro:IPR000569); BEST Arabidopsis thaliana protein match is: ubiquitin-protein ligase 4 (TAIR:AT5G02880.1); Has 6273 Blast hits to 5534 proteins in 324 species: Archae - 2; Bacteria - 240; Metazoa - 3391; Fungi - 909; Plants - 600; Viruses - 3; Other Eukaryotes - 1128 (source: NCBI BLink). & (reliability: 618.0) & (original description: no original description) 0.8916017750584506 40 evm.model.tig00000404.39 (original description: no original description) 0.8893667724435724 41 evm.model.tig00000254.41 no hits & (original description: no original description) 0.8886241220192382 50 evm.model.tig00020903.20 (at1g32750 : 166.0) This gene is predicted to encode a histone acetyltransferase. Five lines with RNAi constructs directed against HAF1 grow normally and can produce root calli, but have defects in agrobacterium-mediated transformation.; HAF01; FUNCTIONS IN: histone acetyltransferase activity, DNA binding; INVOLVED IN: DNA mediated transformation; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TAFII-230 TBP-binding (InterPro:IPR009067), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), Bromodomain, conserved site (InterPro:IPR018359), Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: histone acetyltransferase of the TAFII250 family 2 (TAIR:AT3G19040.1); Has 22854 Blast hits to 14376 proteins in 1001 species: Archae - 24; Bacteria - 596; Metazoa - 11292; Fungi - 2677; Plants - 2799; Viruses - 159; Other Eukaryotes - 5307 (source: NCBI BLink). & (reliability: 332.0) & (original description: no original description) 0.8879256604695792 43 evm.model.tig00020684.47 (q39610|dyha_chlre : 1367.0) Dynein alpha chain, flagellar outer arm (DHC alpha) - Chlamydomonas reinhardtii & (at1g18610 : 85.9) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch repeat type 2 (InterPro:IPR011498), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G74150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 171.8) & (original description: no original description) 0.887903402010181 44 evm.model.tig00021590.1 (original description: no original description) 0.8877564478234568 45 evm.model.tig00000842.21 no hits & (original description: no original description) 0.8874054494471407 46 evm.model.tig00000169.13 (original description: no original description) 0.8866214452520478 47 evm.model.tig00001366.11 (at3g11910 : 226.0) ubiquitin-specific protease 13 (UBP13); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), MATH (InterPro:IPR002083), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 12 (TAIR:AT5G06600.2). & (reliability: 452.0) & (original description: no original description) 0.8861596539577162 48 evm.model.tig00001428.4 (at1g59453 : 80.9) B-block binding subunit of TFIIIC; CONTAINS InterPro DOMAIN/s: B-block binding subunit of TFIIIC (InterPro:IPR007309); BEST Arabidopsis thaliana protein match is: B-block binding subunit of TFIIIC (TAIR:AT1G17450.2); Has 138 Blast hits to 121 proteins in 36 species: Archae - 0; Bacteria - 0; Metazoa - 34; Fungi - 3; Plants - 91; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 161.8) & (original description: no original description) 0.8851989071155071 49 evm.model.tig00000480.33 no hits & (original description: no original description) 0.8849147560115898 62 evm.model.tig00000042.101 (original description: no original description) 0.8834678657256277 51 evm.model.tig00020515.12 no hits & (original description: no original description) 0.8827708496417803 52 evm.model.tig00000076.160 no hits & (original description: no original description) 0.8826824969277036 53 evm.model.tig00020616.21 no hits & (original description: no original description) 0.8824896699513344 54 evm.model.tig00020943.83 no hits & (original description: no original description) 0.8824364715298733 55 evm.model.tig00020604.10 no hits & (original description: no original description) 0.8815089403912882 56 evm.model.tig00000248.64 no hits & (original description: no original description) 0.8813846742074057 57 evm.model.tig00000093.84 no hits & (original description: no original description) 0.8812772747199537 58 evm.model.tig00020553.232 no hits & (original description: no original description) 0.8807141652754187 59 evm.model.tig00000142.6 no hits & (original description: no original description) 0.8793929391401801 60 evm.model.tig00020848.82 no hits & (original description: no original description) 0.87893646694047 61 evm.model.tig00020965.14 no hits & (original description: no original description) 0.8789329824337946 62 evm.model.tig00000402.33 no hits & (original description: no original description) 0.8784218061525385 63 evm.model.tig00000204.87 (at1g72200 : 83.6) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G22500.1); Has 9343 Blast hits to 9316 proteins in 282 species: Archae - 0; Bacteria - 4; Metazoa - 2295; Fungi - 806; Plants - 4899; Viruses - 51; Other Eukaryotes - 1288 (source: NCBI BLink). & (reliability: 167.2) & (original description: no original description) 0.8782590611479424 76 evm.model.tig00000042.99 (original description: no original description) 0.8779434710215124 65 evm.model.tig00020848.69 no hits & (original description: no original description) 0.877822437701007 66 evm.model.tig00000217.23 (at3g16090 : 255.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G65040.2); Has 7341 Blast hits to 7321 proteins in 267 species: Archae - 0; Bacteria - 4; Metazoa - 2254; Fungi - 727; Plants - 3286; Viruses - 21; Other Eukaryotes - 1049 (source: NCBI BLink). & (reliability: 510.0) & (original description: no original description) 0.8754044009551071 67 evm.model.tig00000949.33 no hits & (original description: no original description) 0.8748835208338941 68 evm.model.tig00000431.19 no hits & (original description: no original description) 0.874853945112516 69 evm.model.tig00020553.150 no hits & (original description: no original description) 0.8748418947773722 70 evm.model.tig00000217.45 no hits & (original description: no original description) 0.8738315444810107 71 evm.model.tig00000459.51 (at5g24740 : 80.9) EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: calcium-dependent lipid-binding family protein (TAIR:AT1G48090.1). & (reliability: 161.8) & (original description: no original description) 0.8714469440693178 72 evm.model.tig00000194.63 (original description: no original description) 0.8710041714673457 73 evm.model.tig00020556.88 no hits & (original description: no original description) 0.869898167371839 74 evm.model.tig00020710.17 no hits & (original description: no original description) 0.869479682524998 75 evm.model.tig00000404.40 (original description: no original description) 0.8694451097104099 76 evm.model.tig00000555.16 (original description: no original description) 0.8688644669551784 89 evm.model.tig00000663.61 no hits & (original description: no original description) 0.8688184955116703 98 evm.model.tig00021013.41 (at5g14230 : 108.0) CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: XB3 ortholog 2 in Arabidopsis thaliana (TAIR:AT5G57740.1); Has 66374 Blast hits to 25358 proteins in 1201 species: Archae - 121; Bacteria - 8133; Metazoa - 29530; Fungi - 5885; Plants - 3349; Viruses - 785; Other Eukaryotes - 18571 (source: NCBI BLink). & (q8vyx2|akt1_orysa : 89.7) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (reliability: 216.0) & (original description: no original description) 0.868464077770438 79 evm.model.tig00021462.18 no hits & (original description: no original description) 0.8661831914124094 81 evm.model.tig00021489.2 no hits & (original description: no original description) 0.865582125493967 82 evm.model.tig00020629.20 (at4g34450 : 813.0) coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putative; FUNCTIONS IN: clathrin binding, structural molecule activity, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Coatomer, gamma subunit, appendage, Ig-like subdomain (InterPro:IPR013040), Armadillo-like helical (InterPro:IPR011989), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553), Coatomer, gamma subunit (InterPro:IPR017106), Coatomer, gamma subunit , appendage (InterPro:IPR014863), Armadillo-type fold (InterPro:IPR016024), Clathrin alpha-adaptin/coatomer adaptor, appendage, C-terminal subdomain (InterPro:IPR015873), Clathrin/coatomer adaptor, adaptin-like, appendage, C-terminal subdomain (InterPro:IPR009028), Clathrin/coatomer adaptor, adaptin-like, appendage, Ig-like subdomain (InterPro:IPR013041); BEST Arabidopsis thaliana protein match is: structural molecules (TAIR:AT2G16200.1); Has 1647 Blast hits to 1638 proteins in 222 species: Archae - 2; Bacteria - 2; Metazoa - 707; Fungi - 446; Plants - 176; Viruses - 0; Other Eukaryotes - 314 (source: NCBI BLink). & (reliability: 1626.0) & (original description: no original description) 0.8643843821671083 83 evm.model.tig00020604.9 no hits & (original description: no original description) 0.8616751799624244 85 evm.model.tig00020604.8 no hits & (original description: no original description) 0.8609355881911478 87 evm.model.tig00000718.19 no hits & (original description: no original description) 0.8605369638501147 88 evm.model.tig00020510.153 no hits & (original description: no original description) 0.8595706736086585 90 evm.model.tig00000042.33 no hits & (original description: no original description) 0.8595547402383155 91 evm.model.tig00001030.32 no hits & (original description: no original description) 0.8592411932090568 93 evm.model.tig00020961.141 no hits & (original description: no original description) 0.8591844688563642 94 evm.model.tig00000042.91 (at4g17140 : 114.0) pleckstrin homology (PH) domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Protein of unknown function DUF946 (InterPro:IPR009291), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: calcium-dependent lipid-binding family protein (TAIR:AT1G48090.1). & (reliability: 228.0) & (original description: no original description) 0.8577495713445589 96 evm.model.tig00021281.14 (at3g11910 : 88.6) ubiquitin-specific protease 13 (UBP13); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), MATH (InterPro:IPR002083), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 12 (TAIR:AT5G06600.2). & (reliability: 177.2) & (original description: no original description) 0.8573714140214953 97 evm.model.tig00020800.16 no hits & (original description: no original description) 0.8567734458071664 98 evm.model.tig00021350.43 no hits & (original description: no original description) 0.8564669150819915 99 evm.model.tig00000870.17 no hits & (original description: no original description) 0.8564220859431428 100