Sequence Description Alias PCC hrr evm.model.tig00001206.27 (original description: no original description) 0.9649259513700955 3 evm.model.tig00001017.3 no hits & (original description: no original description) 0.9493375090370844 2 evm.model.tig00000169.13 (original description: no original description) 0.9480786739346581 3 evm.model.tig00021017.28 (original description: no original description) 0.9396491729704727 12 evm.model.tig00000404.40 (original description: no original description) 0.9328945879142853 12 evm.model.tig00000581.7 no hits & (original description: no original description) 0.9328433593274369 6 evm.model.tig00000042.101 (original description: no original description) 0.9325508731225884 14 evm.model.tig00001206.28 (original description: no original description) 0.9316073530717908 21 evm.model.tig00000145.14 no hits & (original description: no original description) 0.9278762615869149 9 evm.model.tig00022075.31 (original description: no original description) 0.9259174606512134 13 evm.model.tig00000404.39 (original description: no original description) 0.9206337542108399 18 evm.model.tig00021462.18 no hits & (original description: no original description) 0.9191815577860104 12 evm.model.tig00021350.41 (original description: no original description) 0.9176379673356047 13 evm.model.tig00000949.33 no hits & (original description: no original description) 0.9173596486864679 14 evm.model.tig00000480.33 no hits & (original description: no original description) 0.917113811799156 21 evm.model.tig00000194.62 (original description: no original description) 0.9160351983584759 16 evm.model.tig00000342.31 no hits & (original description: no original description) 0.9131992421549785 17 evm.model.tig00000142.6 no hits & (original description: no original description) 0.9129803687655507 18 evm.model.tig00000076.78 (original description: no original description) 0.9104859026001236 19 evm.model.tig00000076.76 no hits & (original description: no original description) 0.9103843321897934 20 evm.model.tig00000142.7 (original description: no original description) 0.9096161849614864 21 evm.model.tig00000581.6 no hits & (original description: no original description) 0.9092661364886468 22 evm.model.tig00000949.34 no hits & (original description: no original description) 0.9062353025569804 23 evm.model.tig00020684.47 (q39610|dyha_chlre : 1367.0) Dynein alpha chain, flagellar outer arm (DHC alpha) - Chlamydomonas reinhardtii & (at1g18610 : 85.9) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch repeat type 2 (InterPro:IPR011498), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G74150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 171.8) & (original description: no original description) 0.9055957403735856 24 evm.model.tig00000459.51 (at5g24740 : 80.9) EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: calcium-dependent lipid-binding family protein (TAIR:AT1G48090.1). & (reliability: 161.8) & (original description: no original description) 0.9041564719159976 25 evm.model.tig00000042.116 no hits & (original description: no original description) 0.9024667155464189 26 evm.model.tig00020909.45 no hits & (original description: no original description) 0.9015302632829164 27 evm.model.tig00000194.63 (original description: no original description) 0.9008902299972809 36 evm.model.tig00000849.40 no hits & (original description: no original description) 0.8957487935697637 29 evm.model.tig00000955.33 (original description: no original description) 0.8954491871452895 30 evm.model.tig00000194.61 (original description: no original description) 0.8951917224808894 31 evm.model.tig00000042.99 (original description: no original description) 0.89279511135189 42 evm.model.tig00000093.84 no hits & (original description: no original description) 0.8916043979232703 33 evm.model.tig00000402.33 no hits & (original description: no original description) 0.8903764987498046 34 evm.model.tig00020848.61 0.8898808953002846 35 evm.model.tig00000828.11 (q39610|dyha_chlre : 234.0) Dynein alpha chain, flagellar outer arm (DHC alpha) - Chlamydomonas reinhardtii & (at1g18610 : 95.9) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch repeat type 2 (InterPro:IPR011498), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G74150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 191.8) & (original description: no original description) 0.8864966462042059 36 evm.model.tig00000169.14 no hits & (original description: no original description) 0.8855587227566619 37 evm.model.tig00000042.100 (original description: no original description) 0.8775779004402638 51 evm.model.tig00000555.16 (original description: no original description) 0.8773005456417152 70 evm.model.tig00020943.88 (q9mbf8|dyh1b_chlre : 669.0) Dynein-1-beta heavy chain, flagellar inner arm I1 complex (1-beta DHC) (Dynein-1, subspecies f) - Chlamydomonas reinhardtii & (at2g40570 : 194.0) initiator tRNA phosphoribosyl transferase family protein; FUNCTIONS IN: transferase activity, transferring pentosyl groups; INVOLVED IN: regulation of translation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Initiator tRNA phosphoribosyl transferase (InterPro:IPR007306), tRNA A64-2'-O-ribosylphosphate transferase, RIT1 (InterPro:IPR016519); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 388.0) & (original description: no original description) 0.8766245475125339 49 evm.model.tig00000076.77 no hits & (original description: no original description) 0.8737115916889147 41 evm.model.tig00020604.9 no hits & (original description: no original description) 0.8734960040545808 42 evm.model.tig00000718.19 no hits & (original description: no original description) 0.8726839294821886 43 evm.model.tig00021013.29 no hits & (original description: no original description) 0.871557886857464 78 evm.model.tig00000217.12 no hits & (original description: no original description) 0.8706928611518288 71 evm.model.tig00020553.253 no hits & (original description: no original description) 0.87033275801984 46 evm.model.tig00000217.37 no hits & (original description: no original description) 0.8689810815864136 47 evm.model.tig00020556.28 no hits & (original description: no original description) 0.8657640860460895 49 evm.model.tig00020909.44 no hits & (original description: no original description) 0.8653229873360962 90 evm.model.tig00000350.42 no hits & (original description: no original description) 0.8638298542339606 51 evm.model.tig00000042.33 no hits & (original description: no original description) 0.8589205285767845 63 evm.model.tig00001373.5 no hits & (original description: no original description) 0.858852576587754 59 evm.model.tig00020544.3 no hits & (original description: no original description) 0.8586619779515077 55 evm.model.tig00000194.26 (at3g12810 : 251.0) Encodes a protein similar to ATP-dependent, chromatin-remodeling proteins of the ISWI and SWI2/SNF2 family. Genetic analyses suggest that this gene is involved in multiple flowering pathways. Mutations in PIE1 results in suppression of FLC-mediated delay of flowering and causes early flowering in noninductive photoperiods independently of FLC. PIE1 is required for expression of FLC in the shoot apex but not in the root.Along with ARP6 forms a complex to deposit modified histone H2A.Z at several loci within the genome. This modification alters the expression of the target genes (i.e. FLC, MAF4, MAF6).; PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 (PIE1); FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; INVOLVED IN: in 6 processes; LOCATED IN: SWI/SNF complex, cell wall, chromatin remodeling complex; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: HSA (InterPro:IPR006562), HAS subgroup (InterPro:IPR013999), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), SNF2-related (InterPro:IPR000330), MYB-like (InterPro:IPR017877), SANT, DNA-binding (InterPro:IPR001005), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: INO80 ortholog (TAIR:AT3G57300.1); Has 42311 Blast hits to 26312 proteins in 2357 species: Archae - 246; Bacteria - 10217; Metazoa - 11172; Fungi - 7336; Plants - 2916; Viruses - 500; Other Eukaryotes - 9924 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 143.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 502.0) & (original description: no original description) 0.8586167268897085 56 evm.model.tig00020553.252 no hits & (original description: no original description) 0.8552778148853765 57 evm.model.tig00000142.5 no hits & (original description: no original description) 0.855227449490983 58 evm.model.tig00000851.10 (at1g59820 : 699.0) Encodes a phospholipid translocase. Involved in secretory vesicle formation from trans-Golgi in peripheral columella cells at the root tip. Mutants have short primary roots and grow slower.; aminophospholipid ATPase 3 (ALA3); FUNCTIONS IN: phospholipid transporter activity, ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: Golgi vesicle budding, shoot development, root development; LOCATED IN: Golgi apparatus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, phospholipid-translocating, flippase (InterPro:IPR006539), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT1G17500.1); Has 12776 Blast hits to 11290 proteins in 1545 species: Archae - 148; Bacteria - 4231; Metazoa - 2905; Fungi - 2108; Plants - 937; Viruses - 1; Other Eukaryotes - 2446 (source: NCBI BLink). & (q8run1|aca3_orysa : 88.6) Calcium-transporting ATPase 3, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 3) - Oryza sativa (Rice) & (reliability: 1286.0) & (original description: no original description) 0.852909718878438 59 evm.model.tig00000269.74 no hits & (original description: no original description) 0.8492390986478786 63 evm.model.tig00020892.18 no hits & (original description: no original description) 0.8474434853290954 64 evm.model.tig00001428.4 (at1g59453 : 80.9) B-block binding subunit of TFIIIC; CONTAINS InterPro DOMAIN/s: B-block binding subunit of TFIIIC (InterPro:IPR007309); BEST Arabidopsis thaliana protein match is: B-block binding subunit of TFIIIC (TAIR:AT1G17450.2); Has 138 Blast hits to 121 proteins in 36 species: Archae - 0; Bacteria - 0; Metazoa - 34; Fungi - 3; Plants - 91; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 161.8) & (original description: no original description) 0.8462998093999895 75 evm.model.tig00000581.10 no hits & (original description: no original description) 0.8459038123858381 67 evm.model.tig00001030.34 no hits & (original description: no original description) 0.8455280889228383 68 evm.model.tig00021493.43 no hits & (original description: no original description) 0.8431017928346884 69 evm.model.tig00001030.33 no hits & (original description: no original description) 0.8421528466809483 70 evm.model.tig00021350.42 no hits & (original description: no original description) 0.8362360057507523 73 evm.model.tig00000983.14 no hits & (original description: no original description) 0.8355357203086843 74 evm.model.tig00000042.91 (at4g17140 : 114.0) pleckstrin homology (PH) domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Protein of unknown function DUF946 (InterPro:IPR009291), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: calcium-dependent lipid-binding family protein (TAIR:AT1G48090.1). & (reliability: 228.0) & (original description: no original description) 0.8302350237927564 80 evm.model.tig00020537.65 (q5z987|atr_orysa : 139.0) Serine/threonine-protein kinase ATR (EC 2.7.11.1) - Oryza sativa (Rice) & (at5g40820 : 127.0) Encodes a Arabidopsis ortholog of the ATR protein kinase that is involved in a wide range of responses to DNA damage and plays a central role in cell-cycle regulation. Dominant loss of function alleles identified as suppressors of ALS also exhibit increased tolerance to aluminum. This may be due to the inhibition of terminal differentiation of the root apex upon exposure to Al.; Ataxia telangiectasia-mutated and RAD3-related (ATR); FUNCTIONS IN: protein serine/threonine kinase activity, inositol or phosphatidylinositol kinase activity, binding, phosphotransferase activity, alcohol group as acceptor; INVOLVED IN: in 9 processes; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403), UME (InterPro:IPR012993), Protein kinase-like domain (InterPro:IPR011009), PIK-related kinase, FAT (InterPro:IPR003151), Armadillo-type fold (InterPro:IPR016024), PIK-related kinase (InterPro:IPR014009), Phosphatidylinositol 3/4-kinase, conserved site (InterPro:IPR018936), PIK-related kinase, FATC (InterPro:IPR003152); BEST Arabidopsis thaliana protein match is: ataxia-telangiectasia mutated (TAIR:AT3G48190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 254.0) & (original description: no original description) 0.829773744331614 92 evm.model.tig00001413.4 no hits & (original description: no original description) 0.8289171369241696 83 evm.model.tig00000849.1 (at4g17140 : 128.0) pleckstrin homology (PH) domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Protein of unknown function DUF946 (InterPro:IPR009291), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: calcium-dependent lipid-binding family protein (TAIR:AT1G48090.1). & (reliability: 256.0) & (original description: no original description) 0.828454609958463 84 evm.model.tig00000241.15 (at4g35800 : 1627.0) Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase II; the ortholog of budding yeast RPB1 and a homolog of the E. coli RNA polymerase beta prime subunit.; RNA polymerase II large subunit (NRPB1); FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription, transcription from RNA polymerase II promoter; LOCATED IN: nucleus, chloroplast, DNA-directed RNA polymerase II, core complex, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase II, heptapeptide repeat, eukaryotic (InterPro:IPR000684), RNA polymerase Rpb1, domain 7 (InterPro:IPR007073), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080), RNA polymerase Rpb1, domain 4 (InterPro:IPR007083), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081), RNA polymerase Rpb1, domain 6 (InterPro:IPR007075); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase C1 (TAIR:AT5G60040.1); Has 181834 Blast hits to 82224 proteins in 9254 species: Archae - 731; Bacteria - 33255; Metazoa - 56600; Fungi - 34284; Plants - 19037; Viruses - 3576; Other Eukaryotes - 34351 (source: NCBI BLink). & (q9tl05|rpoc1_nepol : 127.0) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase beta' subunit) (RNA polymerase beta' subunit) - Nephroselmis olivacea & (reliability: 3254.0) & (original description: no original description) 0.8274633337909953 86 evm.model.tig00020604.8 no hits & (original description: no original description) 0.8274015419123834 87 evm.model.tig00001107.7 no hits & (original description: no original description) 0.8258493087613509 88 evm.model.tig00020531.33 no hits & (original description: no original description) 0.825368668440316 89 evm.model.tig00021036.41 no hits & (original description: no original description) 0.823781799527279 91 evm.model.tig00021013.41 (at5g14230 : 108.0) CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: XB3 ortholog 2 in Arabidopsis thaliana (TAIR:AT5G57740.1); Has 66374 Blast hits to 25358 proteins in 1201 species: Archae - 121; Bacteria - 8133; Metazoa - 29530; Fungi - 5885; Plants - 3349; Viruses - 785; Other Eukaryotes - 18571 (source: NCBI BLink). & (q8vyx2|akt1_orysa : 89.7) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (reliability: 216.0) & (original description: no original description) 0.8225548702695038 95 evm.model.tig00000670.32 no hits & (original description: no original description) 0.8205973249304506 97 evm.model.tig00000865.27 (at1g20960 : 291.0) embryo defective 1507 (emb1507); FUNCTIONS IN: in 6 functions; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Sec63 domain (InterPro:IPR004179), Sec63 domain, subgroup (InterPro:IPR018127), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: U5 small nuclear ribonucleoprotein helicase (TAIR:AT2G42270.1). & (reliability: 582.0) & (original description: no original description) 0.8204977137918507 98 evm.model.tig00000459.37 no hits & (original description: no original description) 0.8199378676950444 100