Sequence Description Alias PCC hrr evm.model.tig00000342.32 no hits & (original description: no original description) 0.9158769917790334 4 evm.model.tig00000430.14 no hits & (original description: no original description) 0.9036339087935236 10 evm.model.tig00021035.4 (at4g33090 : 372.0) encodes an aminopeptidase, a ortholog of mouse microsomal AP (EC 3.4.11.2).; aminopeptidase M1 (APM1); FUNCTIONS IN: aminopeptidase activity; INVOLVED IN: auxin polar transport; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M1, puromycin-sensitive aminopeptidase (InterPro:IPR015568), Peptidase M1, membrane alanine aminopeptidase (InterPro:IPR001930), Peptidase M1, membrane alanine aminopeptidase, N-terminal (InterPro:IPR014782); BEST Arabidopsis thaliana protein match is: Peptidase M1 family protein (TAIR:AT1G63770.3); Has 9205 Blast hits to 9101 proteins in 1870 species: Archae - 122; Bacteria - 4443; Metazoa - 2260; Fungi - 495; Plants - 237; Viruses - 0; Other Eukaryotes - 1648 (source: NCBI BLink). & (reliability: 744.0) & (original description: no original description) 0.9009417940194614 3 evm.model.tig00020610.13 (at5g35750 : 151.0) Encodes histidine kinase AHK2.; histidine kinase 2 (HK2); FUNCTIONS IN: osmosensor activity, cytokinin receptor activity, protein histidine kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 3 (TAIR:AT1G27320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q9m7m1|etr1_prupe : 122.0) Ethylene receptor (EC 2.7.13.3) - Prunus persica (Peach) & (reliability: 302.0) & (original description: no original description) 0.8983572958700727 4 evm.model.tig00000475.8 no hits & (original description: no original description) 0.8978334409674289 8 evm.model.tig00021133.6 no hits & (original description: no original description) 0.8974697303508096 39 evm.model.tig00000219.58 no hits & (original description: no original description) 0.8965408896568456 7 evm.model.tig00000718.19 no hits & (original description: no original description) 0.8934813883163079 11 evm.model.tig00020604.8 no hits & (original description: no original description) 0.893156472412897 9 evm.model.tig00001056.5 no hits & (original description: no original description) 0.8905996027770358 78 evm.model.tig00021221.12 no hits & (original description: no original description) 0.8904512424913582 23 evm.model.tig00020610.119 no hits & (original description: no original description) 0.8891822618250217 73 evm.model.tig00020892.19 no hits & (original description: no original description) 0.8845886651554733 34 evm.model.tig00020944.35 (at4g03550 : 160.0) Encodes a callose synthase that is required for wound and papillary callose formation in response to fungal pathogens Erysiphe and Blumeria. Mutants are resistant to P. parasitica and exhibit an exaggerated PR1 response.Contributes to PAMP-induced basal defense.; glucan synthase-like 5 (GSL05); FUNCTIONS IN: transferase activity, transferring glycosyl groups, 1,3-beta-glucan synthase activity; INVOLVED IN: in 12 processes; LOCATED IN: 1,3-beta-glucan synthase complex, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440); BEST Arabidopsis thaliana protein match is: glucan synthase-like 1 (TAIR:AT4G04970.1); Has 1221 Blast hits to 894 proteins in 155 species: Archae - 2; Bacteria - 0; Metazoa - 0; Fungi - 695; Plants - 448; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (reliability: 320.0) & (original description: no original description) 0.8837501804088497 31 evm.model.tig00021070.6 no hits & (original description: no original description) 0.8832237981631669 92 evm.model.tig00000842.21 no hits & (original description: no original description) 0.8802266582622478 34 evm.model.tig00020604.10 no hits & (original description: no original description) 0.8800738670276838 34 evm.model.tig00021525.17 no hits & (original description: no original description) 0.8798321195014047 20 evm.model.tig00000204.67 no hits & (original description: no original description) 0.8787675429601782 77 evm.model.tig00021352.49 (at3g28430 : 216.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function FPL (InterPro:IPR019155); Has 243 Blast hits to 233 proteins in 101 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 432.0) & (original description: no original description) 0.8786877152378262 22 evm.model.tig00000718.7 no hits & (original description: no original description) 0.8786321356175067 31 evm.model.tig00020589.6 no hits & (original description: no original description) 0.8778080470508192 24 evm.model.tig00000178.39 no hits & (original description: no original description) 0.8772771589980791 77 evm.model.tig00020572.64 no hits & (original description: no original description) 0.8767181509518344 62 evm.model.tig00020629.139 no hits & (original description: no original description) 0.8762848236429086 27 evm.model.tig00000254.3 no hits & (original description: no original description) 0.8756140284674032 28 evm.model.tig00001030.32 no hits & (original description: no original description) 0.8751375156766542 30 evm.model.tig00000881.25 no hits & (original description: no original description) 0.8745769931120041 30 evm.model.tig00001373.5 no hits & (original description: no original description) 0.8727629364252428 36 evm.model.tig00021571.4 no hits & (original description: no original description) 0.8725682766911607 70 evm.model.tig00020830.58 no hits & (original description: no original description) 0.8717477896638995 46 evm.model.tig00021238.17 (at5g61140 : 645.0) Encodes a predicted protein with 30% identity with MER3/RCK.; U5 small nuclear ribonucleoprotein helicase; FUNCTIONS IN: in 6 functions; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Sec63 domain (InterPro:IPR004179), Sec63 domain, subgroup (InterPro:IPR018127), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: U5 small nuclear ribonucleoprotein helicase, putative (TAIR:AT1G20960.2). & (reliability: 1290.0) & (original description: no original description) 0.8704006276934064 34 evm.model.tig00021133.7 no hits & (original description: no original description) 0.869724135891205 43 evm.model.tig00021350.41 (original description: no original description) 0.869479682524998 75 evm.model.tig00000383.49 (at4g08500 : 80.5) Encodes a member of the A1 subgroup of the MEKK (MAPK/ERK kinase kinase) family. MEKK is another name for Mitogen-Activated Protein Kinase Kinase Kinase (MAPKKK or MAP3K). This subgroup has four members: At4g08500 (MEKK1, also known as ARAKIN, MAP3Kb1, MAPKKK8), At4g08480 (MEKK2, also known as MAP3Kb4, MAPKKK9), At4g08470 (MEKK3, also known as MAP3Kb3, MAPKKK10) and At4g12020 (MEKK4, also known as MAP3Kb5, MAPKKK11, WRKY19). Nomenclatures for mitogen-activated protein kinases are described in Trends in Plant Science 2002, 7(7):301. Mediates cold, salt, cadmium and wounding stress signalling. Phosphorylates MEK1.; MAPK/ERK kinase kinase 1 (MEKK1); FUNCTIONS IN: protein binding, kinase binding, DNA binding, MAP kinase kinase kinase activity, kinase activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 9 (TAIR:AT4G08480.1); Has 132336 Blast hits to 130259 proteins in 4567 species: Archae - 142; Bacteria - 14700; Metazoa - 49430; Fungi - 12971; Plants - 32949; Viruses - 685; Other Eukaryotes - 21459 (source: NCBI BLink). & (reliability: 161.0) & (original description: no original description) 0.868580554422404 71 evm.model.tig00000478.5 no hits & (original description: no original description) 0.8682305086399291 53 evm.model.tig00000865.10 no hits & (original description: no original description) 0.8680972884667464 39 evm.model.tig00020710.88 (at1g50030 : 1769.0) Related to TOR proteins from yeast and mammals, regulators of cell growth in response to nutrient availability. TOR proteins belong to the family of phosphatidylinositol 3-kinase and are targets of the antiproliferative drug rapamycin. AtTOR binds the yeast FKBP12 protein in the presence of Rapamycin, is involved in embryogenesis and is expressed in embryos, endosperm and meristems.; target of rapamycin (TOR); FUNCTIONS IN: protein binding, 1-phosphatidylinositol-3-kinase activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403), FKBP12-rapamycin-associated protein, FKBP12-rapamycin-binding (InterPro:IPR009076), Armadillo-like helical (InterPro:IPR011989), Protein kinase-like domain (InterPro:IPR011009), PIK-related kinase, FAT (InterPro:IPR003151), PIK-related kinase (InterPro:IPR014009), Armadillo-type fold (InterPro:IPR016024), Phosphatidylinositol 3/4-kinase, conserved site (InterPro:IPR018936), PIK-related kinase, FATC (InterPro:IPR003152); BEST Arabidopsis thaliana protein match is: Ataxia telangiectasia-mutated and RAD3-related (TAIR:AT5G40820.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q5z987|atr_orysa : 171.0) Serine/threonine-protein kinase ATR (EC 2.7.11.1) - Oryza sativa (Rice) & (reliability: 3538.0) & (original description: no original description) 0.8657763072946634 96 evm.model.tig00001029.38 no hits & (original description: no original description) 0.8657645397225358 42 evm.model.tig00001490.7 no hits & (original description: no original description) 0.8654344908332436 43 evm.model.tig00020693.36 (at5g05460 : 175.0) Glycosyl hydrolase family 85 ; FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 85 (InterPro:IPR005201), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 85 (TAIR:AT3G11040.1); Has 480 Blast hits to 472 proteins in 209 species: Archae - 0; Bacteria - 262; Metazoa - 108; Fungi - 28; Plants - 47; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (reliability: 350.0) & (original description: no original description) 0.865178328831395 44 evm.model.tig00000145.37 (at3g27960 : 114.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: pollen tube growth; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G27500.1); Has 11593 Blast hits to 4983 proteins in 549 species: Archae - 196; Bacteria - 3972; Metazoa - 4777; Fungi - 883; Plants - 387; Viruses - 3; Other Eukaryotes - 1375 (source: NCBI BLink). & (reliability: 228.0) & (original description: no original description) 0.8651360577040347 45 evm.model.tig00020848.82 no hits & (original description: no original description) 0.8647648717849157 46 evm.model.tig00000269.74 no hits & (original description: no original description) 0.8641626824687951 47 evm.model.tig00000194.26 (at3g12810 : 251.0) Encodes a protein similar to ATP-dependent, chromatin-remodeling proteins of the ISWI and SWI2/SNF2 family. Genetic analyses suggest that this gene is involved in multiple flowering pathways. Mutations in PIE1 results in suppression of FLC-mediated delay of flowering and causes early flowering in noninductive photoperiods independently of FLC. PIE1 is required for expression of FLC in the shoot apex but not in the root.Along with ARP6 forms a complex to deposit modified histone H2A.Z at several loci within the genome. This modification alters the expression of the target genes (i.e. FLC, MAF4, MAF6).; PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 (PIE1); FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; INVOLVED IN: in 6 processes; LOCATED IN: SWI/SNF complex, cell wall, chromatin remodeling complex; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: HSA (InterPro:IPR006562), HAS subgroup (InterPro:IPR013999), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), SNF2-related (InterPro:IPR000330), MYB-like (InterPro:IPR017877), SANT, DNA-binding (InterPro:IPR001005), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: INO80 ortholog (TAIR:AT3G57300.1); Has 42311 Blast hits to 26312 proteins in 2357 species: Archae - 246; Bacteria - 10217; Metazoa - 11172; Fungi - 7336; Plants - 2916; Viruses - 500; Other Eukaryotes - 9924 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 143.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 502.0) & (original description: no original description) 0.8637980366829549 48 evm.model.tig00001041.1 no hits & (original description: no original description) 0.8627242748296686 91 evm.model.tig00021275.7 no hits & (original description: no original description) 0.8606171753688635 53 evm.model.tig00000310.54 no hits & (original description: no original description) 0.8604207879771559 54 evm.model.tig00021037.67 no hits & (original description: no original description) 0.8600710392230548 98 evm.model.tig00020904.65 no hits & (original description: no original description) 0.859519504271206 76 evm.model.tig00000949.33 no hits & (original description: no original description) 0.8590976053447574 58 evm.model.tig00001366.11 (at3g11910 : 226.0) ubiquitin-specific protease 13 (UBP13); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), MATH (InterPro:IPR002083), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 12 (TAIR:AT5G06600.2). & (reliability: 452.0) & (original description: no original description) 0.8590871224487122 59 evm.model.tig00001098.19 no hits & (original description: no original description) 0.8579039073775062 60 evm.model.tig00000217.23 (at3g16090 : 255.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G65040.2); Has 7341 Blast hits to 7321 proteins in 267 species: Archae - 0; Bacteria - 4; Metazoa - 2254; Fungi - 727; Plants - 3286; Viruses - 21; Other Eukaryotes - 1049 (source: NCBI BLink). & (reliability: 510.0) & (original description: no original description) 0.8575462400009701 61 evm.model.tig00000459.51 (at5g24740 : 80.9) EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: calcium-dependent lipid-binding family protein (TAIR:AT1G48090.1). & (reliability: 161.8) & (original description: no original description) 0.8570623933686069 64 evm.model.tig00000056.31 no hits & (original description: no original description) 0.8569810045082549 77 evm.model.tig00020830.88 no hits & (original description: no original description) 0.8548321256855591 85 evm.model.tig00020912.104 no hits & (original description: no original description) 0.8539226778883688 67 evm.model.tig00020553.232 no hits & (original description: no original description) 0.8536322238104872 68 evm.model.tig00001164.8 (at5g42540 : 137.0) Encodes a protein with similarity to yeast 5'-3'exonucleases and can functionally complement the yeast mutations. In Arabidopsis XRN2 acts as a suppressor of posttranscriptional gene silencing.; exoribonuclease 2 (XRN2); CONTAINS InterPro DOMAIN/s: 5'-3' exoribonuclease 2 (InterPro:IPR017151), Zinc finger, CCHC-type (InterPro:IPR001878), Putative 5-3 exonuclease (InterPro:IPR004859); BEST Arabidopsis thaliana protein match is: 5'-3' exoribonuclease 3 (TAIR:AT1G75660.1). & (reliability: 274.0) & (original description: no original description) 0.8513097668440373 69 evm.model.tig00020943.83 no hits & (original description: no original description) 0.850375294173195 91 evm.model.tig00001629.1 no hits & (original description: no original description) 0.847697865171551 75 evm.model.tig00021179.31 no hits & (original description: no original description) 0.8476484468550538 76 evm.model.tig00001041.30 (at4g03550 : 167.0) Encodes a callose synthase that is required for wound and papillary callose formation in response to fungal pathogens Erysiphe and Blumeria. Mutants are resistant to P. parasitica and exhibit an exaggerated PR1 response.Contributes to PAMP-induced basal defense.; glucan synthase-like 5 (GSL05); FUNCTIONS IN: transferase activity, transferring glycosyl groups, 1,3-beta-glucan synthase activity; INVOLVED IN: in 12 processes; LOCATED IN: 1,3-beta-glucan synthase complex, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440); BEST Arabidopsis thaliana protein match is: glucan synthase-like 1 (TAIR:AT4G04970.1); Has 1221 Blast hits to 894 proteins in 155 species: Archae - 2; Bacteria - 0; Metazoa - 0; Fungi - 695; Plants - 448; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (reliability: 334.0) & (original description: no original description) 0.8451365379495435 85 evm.model.tig00000227.55 no hits & (original description: no original description) 0.8443307496317349 87 evm.model.tig00000789.8 no hits & (original description: no original description) 0.8430294057004484 91 evm.model.tig00000670.32 no hits & (original description: no original description) 0.8415514491218197 94 evm.model.tig00021350.4 no hits & (original description: no original description) 0.8401167605004936 100