Sequence Description Alias PCC hrr evm.model.tig00020780.65 no hits & (original description: no original description) 0.912526468824763 1 evm.model.tig00000852.9 (at3g61860 : 165.0) encodes an arginine/serine-rich splicing factor. transcript is alternatively spliced and is differentially expressed in different tissues (flowers, roots, stems, and leaves) examined.; RSP31; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome, RNA splicing; LOCATED IN: nuclear speck, spliceosomal complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G46610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 330.0) & (original description: no original description) 0.8750620285981894 2 evm.model.tig00000489.17 (at4g02070 : 353.0) encodes a DNA mismatch repair homolog of human MutS gene, MSH6. There are four MutS genes in Arabidopsis, MSH2, MSH3, MSH6, and MSH7, which all act as heterodimers and bind to 51-mer duplexes. MSH2*MSH6 bound the (+T) substrate strongly, (T/G) well, and (+AAG) no better than it did a (T/A) homoduplex.; MUTS homolog 6 (MSH6); FUNCTIONS IN: damaged DNA binding; INVOLVED IN: mismatch repair; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein Msh6 (InterPro:IPR017261), DNA mismatch repair protein MutS, clamp (InterPro:IPR007861), DNA mismatch repair protein MutS, connector (InterPro:IPR007860), DNA mismatch repair protein MutS, core (InterPro:IPR007696), DNA mismatch repair protein MutS-like, N-terminal (InterPro:IPR007695), DNA mismatch repair protein MutS, N-terminal (InterPro:IPR016151), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432), DNA mismatch repair protein MutS-homologue MSH6 (InterPro:IPR015536), Tudor domain (InterPro:IPR002999); BEST Arabidopsis thaliana protein match is: homolog of DNA mismatch repair protein MSH3 (TAIR:AT4G25540.1). & (q9xgc9|msh2_maize : 149.0) DNA mismatch repair protein MSH2 (MUS1) - Zea mays (Maize) & (reliability: 706.0) & (original description: no original description) 0.8710681976373867 7 evm.model.tig00021073.3 no hits & (original description: no original description) 0.8691606871041598 12 evm.model.tig00001215.1 no hits & (original description: no original description) 0.866408999209913 11 evm.model.tig00020710.121 no hits & (original description: no original description) 0.8646387949714451 64 evm.model.tig00020746.11 no hits & (original description: no original description) 0.8610910774543232 7 evm.model.tig00021435.51 no hits & (original description: no original description) 0.8539351005742667 22 evm.model.tig00021122.16 no hits & (original description: no original description) 0.8504855247568199 25 evm.model.tig00000507.28 no hits & (original description: no original description) 0.8489965541726735 39 evm.model.tig00021462.22 no hits & (original description: no original description) 0.8446677400394192 68 evm.model.tig00000237.41 (at3g45830 : 145.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02290.1); Has 499 Blast hits to 438 proteins in 100 species: Archae - 0; Bacteria - 7; Metazoa - 236; Fungi - 15; Plants - 108; Viruses - 2; Other Eukaryotes - 131 (source: NCBI BLink). & (reliability: 290.0) & (original description: no original description) 0.83769439102553 64 evm.model.tig00000955.8 no hits & (original description: no original description) 0.8371596076977862 48 evm.model.tig00000769.5 no hits & (original description: no original description) 0.8369457892640235 37 evm.model.tig00000823.27 no hits & (original description: no original description) 0.8323199456019471 15 evm.model.tig00000857.18 no hits & (original description: no original description) 0.8316458180722783 25 evm.model.tig00000480.43 (at3g24590 : 83.6) Encodes a signal peptidase Plsp1 (plastidic type I signal peptidase 1). Required for thylakoid development. Functions in the maturation of the 75-kD component of the translocon at the outer envelope membrane of chloroplasts and oxygen evolving complex subunit 33 (OE33).; plastidic type i signal peptidase 1 (PLSP1); FUNCTIONS IN: peptidase activity; INVOLVED IN: proteolysis, thylakoid membrane organization, protein maturation; LOCATED IN: chloroplast thylakoid membrane, chloroplast, membrane, plastid envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S24/S26A/S26B/S26C, beta-ribbon domain (InterPro:IPR011056), Peptidase S24/S26A/S26B/S26C (InterPro:IPR015927), Peptidase S26A, signal peptidase I, conserved site (InterPro:IPR019758), Peptidase S26, conserved region (InterPro:IPR019533), Peptidase S26A, signal peptidase I (InterPro:IPR000223), Peptidase S26A, signal peptidase I, serine active site (InterPro:IPR019756); BEST Arabidopsis thaliana protein match is: Peptidase S24/S26A/S26B/S26C family protein (TAIR:AT1G06870.1); Has 9773 Blast hits to 9438 proteins in 2404 species: Archae - 0; Bacteria - 7280; Metazoa - 206; Fungi - 105; Plants - 230; Viruses - 0; Other Eukaryotes - 1952 (source: NCBI BLink). & (reliability: 167.2) & (original description: no original description) 0.8309936284051729 65 evm.model.tig00021318.40 no hits & (original description: no original description) 0.8308104063428442 18 evm.model.tig00020553.130 (at3g54690 : 97.4) Sugar isomerase (SIS) family protein; FUNCTIONS IN: isomerase activity, sugar binding; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: KpsF/GutQ (InterPro:IPR004800), Sugar isomerase (SIS) (InterPro:IPR001347), Cystathionine beta-synthase, core (InterPro:IPR000644); Has 8722 Blast hits to 8719 proteins in 1857 species: Archae - 184; Bacteria - 5776; Metazoa - 15; Fungi - 131; Plants - 43; Viruses - 2; Other Eukaryotes - 2571 (source: NCBI BLink). & (reliability: 194.8) & (original description: no original description) 0.8298440154586627 19 evm.model.tig00001374.5 no hits & (original description: no original description) 0.8285955202886509 20 evm.model.tig00001331.14 no hits & (original description: no original description) 0.8220195650939736 31 evm.model.tig00001154.4 (at3g63460 : 140.0) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G18830.1). & (reliability: 280.0) & (original description: no original description) 0.821498075244625 42 evm.model.tig00000889.34 no hits & (original description: no original description) 0.8205140814490494 26 evm.model.tig00021217.5 no hits & (original description: no original description) 0.8200908316944682 72 evm.model.tig00021623.14 no hits & (original description: no original description) 0.8180475491642974 47 evm.model.tig00000169.20 no hits & (original description: no original description) 0.8138661861946079 64 evm.model.tig00001029.30 no hits & (original description: no original description) 0.8112778345721134 33 evm.model.tig00000342.16 no hits & (original description: no original description) 0.80986797625674 34 evm.model.tig00000663.32 no hits & (original description: no original description) 0.8034568692454697 36 evm.model.tig00021433.4 no hits & (original description: no original description) 0.8005619948207513 41 evm.model.tig00021374.7 no hits & (original description: no original description) 0.8004190347475343 61 evm.model.tig00000655.10 no hits & (original description: no original description) 0.7999426663288015 86 evm.model.tig00021612.22 no hits & (original description: no original description) 0.7982815722653819 57 evm.model.tig00001366.20 (at3g19050 : 296.0) PHRAGMOPLAST ORIENTING KINESIN 2 is one of the two Arabidopsis homologs isolated in yeast two-hybrid screen for interaction partners of maize gene TANGLED1 (TAN1). Based on sequence homology in their motor domains, POK1 and POK2 belong to the kinesin-12 class which also includes the well-characterized group of phragmoplast-associated kinesins AtPAKRPs. Both kinesins are composed of an N-terminal motor domain throughout the entire C terminus and putative cargo binding tail domains. The expression domains for POK2 constructs were broader than those for POK1; both are expressed in tissues enriched for dividing cells. The phenotype of pok1/pok2 double mutants strongly resembles that of maize tan1 mutants, characterized by misoriented mitotic cytoskeletal arrays and misplaced cell walls.; phragmoplast orienting kinesin 2 (POK2); FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: cytokinesis; EXPRESSED IN: root vascular system, primary root tip, lateral root primordium; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: phragmoplast orienting kinesin 1 (TAIR:AT3G17360.1); Has 204267 Blast hits to 80386 proteins in 3219 species: Archae - 3327; Bacteria - 35963; Metazoa - 90351; Fungi - 17822; Plants - 12667; Viruses - 746; Other Eukaryotes - 43391 (source: NCBI BLink). & (o23826|k125_tobac : 227.0) 125 kDa kinesin-related protein - Nicotiana tabacum (Common tobacco) & (reliability: 592.0) & (original description: no original description) 0.7975636887779088 65 evm.model.tig00000093.195 no hits & (original description: no original description) 0.7935442060510899 57 evm.model.tig00021275.2 no hits & (original description: no original description) 0.7934130523597633 75 evm.model.tig00000057.115 no hits & (original description: no original description) 0.79222618380978 53 evm.model.tig00000139.17 no hits & (original description: no original description) 0.7904508628687731 55 evm.model.tig00021582.13 no hits & (original description: no original description) 0.7869271244856852 57 evm.model.tig00000378.12 no hits & (original description: no original description) 0.7853935733955162 60 evm.model.tig00021352.8 no hits & (original description: no original description) 0.7853366787756085 61 evm.model.tig00020704.44 no hits & (original description: no original description) 0.783454284516859 64 evm.model.tig00000663.39 no hits & (original description: no original description) 0.7814645492741628 69 evm.model.tig00021281.36 (at2g14255 : 101.0) Ankyrin repeat family protein with DHHC zinc finger domain; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein with DHHC zinc finger domain (TAIR:AT5G20350.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q8vyx2|akt1_orysa : 86.7) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (reliability: 202.0) & (original description: no original description) 0.7799671126506537 73 evm.model.tig00000881.19 no hits & (original description: no original description) 0.7797462970527169 75 evm.model.tig00000448.36 no hits & (original description: no original description) 0.7779698334706853 77 evm.model.tig00000889.3 no hits & (original description: no original description) 0.7767554533067398 81 evm.model.tig00000144.158 no hits & (original description: no original description) 0.7751751671004081 85 evm.model.tig00000093.30 no hits & (original description: no original description) 0.7713645954046038 89 evm.model.tig00021043.10 no hits & (original description: no original description) 0.7707700697664119 90 evm.model.tig00020710.122 no hits & (original description: no original description) 0.7704054621705778 92 evm.model.tig00000057.45 no hits & (original description: no original description) 0.7698139265224608 93 evm.model.tig00021017.13 no hits & (original description: no original description) 0.7667495508232096 98