Sequence Description Alias PCC hrr evm.model.tig00022075.31 (original description: no original description) 0.9820376360092005 1 evm.model.tig00000194.62 (original description: no original description) 0.9721250960848213 3 evm.model.tig00000076.78 (original description: no original description) 0.9705735181516554 4 evm.model.tig00001206.27 (original description: no original description) 0.9695493168251548 4 evm.model.tig00000076.77 no hits & (original description: no original description) 0.9628684733949275 5 evm.model.tig00000404.40 (original description: no original description) 0.9602910700596393 6 evm.model.tig00000342.31 no hits & (original description: no original description) 0.9534380622149229 7 evm.model.tig00000076.76 no hits & (original description: no original description) 0.952060997025194 8 evm.model.tig00000194.61 (original description: no original description) 0.9462827087313239 9 evm.model.tig00000169.13 (original description: no original description) 0.9444602712950819 10 evm.model.tig00000042.101 (original description: no original description) 0.9438716494761432 11 evm.model.tig00000169.15 (original description: no original description) 0.9396491729704727 12 evm.model.tig00001206.28 (original description: no original description) 0.9204301872511516 28 evm.model.tig00000949.33 no hits & (original description: no original description) 0.9186340149412576 14 evm.model.tig00020531.33 no hits & (original description: no original description) 0.9172105956279167 15 evm.model.tig00000955.33 (original description: no original description) 0.916949931449425 18 evm.model.tig00001017.3 no hits & (original description: no original description) 0.915697119747091 17 evm.model.tig00001030.33 no hits & (original description: no original description) 0.9133506416029047 18 evm.model.tig00020892.18 no hits & (original description: no original description) 0.912344341249442 19 evm.model.tig00000480.33 no hits & (original description: no original description) 0.9120431076016607 27 evm.model.tig00000404.39 (original description: no original description) 0.9064993276236025 29 evm.model.tig00000194.63 (original description: no original description) 0.9056501415812209 33 evm.model.tig00021462.18 no hits & (original description: no original description) 0.904311068275091 23 evm.model.tig00020684.47 (q39610|dyha_chlre : 1367.0) Dynein alpha chain, flagellar outer arm (DHC alpha) - Chlamydomonas reinhardtii & (at1g18610 : 85.9) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch repeat type 2 (InterPro:IPR011498), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G74150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 171.8) & (original description: no original description) 0.8995930663924144 24 evm.model.tig00000581.7 no hits & (original description: no original description) 0.8994128882432517 25 evm.model.tig00000145.14 no hits & (original description: no original description) 0.8979126583518936 26 evm.model.tig00000459.51 (at5g24740 : 80.9) EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: calcium-dependent lipid-binding family protein (TAIR:AT1G48090.1). & (reliability: 161.8) & (original description: no original description) 0.8954038313973862 27 evm.model.tig00000025.20 (at5g23110 : 208.0) Zinc finger, C3HC4 type (RING finger) family protein; FUNCTIONS IN: zinc ion binding, ATP binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: Transmembrane Fragile-X-F-associated protein (TAIR:AT1G73950.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 416.0) & (original description: no original description) 0.8934844881539089 28 evm.model.tig00020553.252 no hits & (original description: no original description) 0.8915098704654677 29 evm.model.tig00000093.136 (at1g80070 : 229.0) a genetic locus involved in embryogenesis. Mutations in this locus result in an abnormal suspensor and embryo lethality.; ABNORMAL SUSPENSOR 2 (SUS2); INVOLVED IN: nuclear mRNA splicing, via spliceosome; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555), Pre-mRNA-processing-splicing factor 8, U5-snRNA-binding (InterPro:IPR019581), Pre-mRNA-processing-splicing factor 8 (InterPro:IPR012591), PROCN (InterPro:IPR012592), Pre-mRNA-processing-splicing factor 8, U6-snRNA-binding (InterPro:IPR019580), PRP8 domain IV core (InterPro:IPR021983), PRO, C-terminal (InterPro:IPR012984), RNA recognition motif, spliceosomal PrP8 (InterPro:IPR019582); BEST Arabidopsis thaliana protein match is: Pre-mRNA-processing-splicing factor (TAIR:AT4G38780.1); Has 828 Blast hits to 729 proteins in 312 species: Archae - 0; Bacteria - 2; Metazoa - 333; Fungi - 220; Plants - 69; Viruses - 2; Other Eukaryotes - 202 (source: NCBI BLink). & (reliability: 458.0) & (original description: no original description) 0.8879706104074799 30 evm.model.tig00000042.91 (at4g17140 : 114.0) pleckstrin homology (PH) domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Protein of unknown function DUF946 (InterPro:IPR009291), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: calcium-dependent lipid-binding family protein (TAIR:AT1G48090.1). & (reliability: 228.0) & (original description: no original description) 0.8877688772597887 31 evm.model.tig00000949.34 no hits & (original description: no original description) 0.8860686867544781 32 evm.model.tig00020848.62 no hits & (original description: no original description) 0.8837606055252649 33 evm.model.tig00000865.27 (at1g20960 : 291.0) embryo defective 1507 (emb1507); FUNCTIONS IN: in 6 functions; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Sec63 domain (InterPro:IPR004179), Sec63 domain, subgroup (InterPro:IPR018127), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: U5 small nuclear ribonucleoprotein helicase (TAIR:AT2G42270.1). & (reliability: 582.0) & (original description: no original description) 0.8817198328825399 34 evm.model.tig00000455.20 no hits & (original description: no original description) 0.8809273265757223 35 evm.model.tig00000042.99 (original description: no original description) 0.8776735703358207 62 evm.model.tig00021433.23 no hits & (original description: no original description) 0.8766291624328825 37 evm.model.tig00000093.84 no hits & (original description: no original description) 0.8692842178870782 49 evm.model.tig00020531.25 no hits & (original description: no original description) 0.8654990220656936 39 evm.model.tig00000194.26 (at3g12810 : 251.0) Encodes a protein similar to ATP-dependent, chromatin-remodeling proteins of the ISWI and SWI2/SNF2 family. Genetic analyses suggest that this gene is involved in multiple flowering pathways. Mutations in PIE1 results in suppression of FLC-mediated delay of flowering and causes early flowering in noninductive photoperiods independently of FLC. PIE1 is required for expression of FLC in the shoot apex but not in the root.Along with ARP6 forms a complex to deposit modified histone H2A.Z at several loci within the genome. This modification alters the expression of the target genes (i.e. FLC, MAF4, MAF6).; PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 (PIE1); FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; INVOLVED IN: in 6 processes; LOCATED IN: SWI/SNF complex, cell wall, chromatin remodeling complex; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: HSA (InterPro:IPR006562), HAS subgroup (InterPro:IPR013999), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), SNF2-related (InterPro:IPR000330), MYB-like (InterPro:IPR017877), SANT, DNA-binding (InterPro:IPR001005), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: INO80 ortholog (TAIR:AT3G57300.1); Has 42311 Blast hits to 26312 proteins in 2357 species: Archae - 246; Bacteria - 10217; Metazoa - 11172; Fungi - 7336; Plants - 2916; Viruses - 500; Other Eukaryotes - 9924 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 143.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 502.0) & (original description: no original description) 0.8643270588676163 40 evm.model.tig00000169.14 no hits & (original description: no original description) 0.8631287603790269 41 evm.model.tig00020553.253 no hits & (original description: no original description) 0.8584442718371731 42 evm.model.tig00020848.61 0.8582508519290207 43 evm.model.tig00000849.40 no hits & (original description: no original description) 0.856724044529863 44 evm.model.tig00000269.74 no hits & (original description: no original description) 0.8512200504301904 46 evm.model.tig00000581.6 no hits & (original description: no original description) 0.8493037382218975 53 evm.model.tig00001301.1 no hits & (original description: no original description) 0.8475186989575564 48 evm.model.tig00021518.25 no hits & (original description: no original description) 0.8469471816528689 49 evm.model.tig00020544.3 no hits & (original description: no original description) 0.8424492476461993 52 evm.model.tig00001428.4 (at1g59453 : 80.9) B-block binding subunit of TFIIIC; CONTAINS InterPro DOMAIN/s: B-block binding subunit of TFIIIC (InterPro:IPR007309); BEST Arabidopsis thaliana protein match is: B-block binding subunit of TFIIIC (TAIR:AT1G17450.2); Has 138 Blast hits to 121 proteins in 36 species: Archae - 0; Bacteria - 0; Metazoa - 34; Fungi - 3; Plants - 91; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 161.8) & (original description: no original description) 0.8416824627776409 85 evm.model.tig00021502.2 (at3g49600 : 223.0) Encodes a ubiquitin-specific protease which catalyzes deubiquitination of histone H2B and is required for heterochromatin silencing.Loss of function mutations display autonomous endosperm development and embryo arrest. Loss of function also results in an increase in expression of the PcG complex target gene PHE1.; ubiquitin-specific protease 26 (UBP26); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: seed development; LOCATED IN: nucleolus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin-specific peptidase, DUSP domain (InterPro:IPR006615), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 13 (TAIR:AT3G11910.1); Has 7210 Blast hits to 6677 proteins in 263 species: Archae - 0; Bacteria - 2; Metazoa - 3696; Fungi - 1305; Plants - 848; Viruses - 3; Other Eukaryotes - 1356 (source: NCBI BLink). & (reliability: 446.0) & (original description: no original description) 0.8413766548467629 54 evm.model.tig00020592.62 no hits & (original description: no original description) 0.8413354595708837 55 evm.model.tig00001030.34 no hits & (original description: no original description) 0.8409418158479249 56 evm.model.tig00000241.172 no hits & (original description: no original description) 0.8409039521208191 57 evm.model.tig00020944.22 no hits & (original description: no original description) 0.8389136617294237 58 evm.model.tig00000217.37 no hits & (original description: no original description) 0.8379528964433254 74 evm.model.tig00000983.14 no hits & (original description: no original description) 0.8372133512670967 60 evm.model.tig00020801.50 no hits & (original description: no original description) 0.8358506652073681 61 evm.model.tig00020553.133 no hits & (original description: no original description) 0.8358505383984466 64 evm.model.tig00021350.42 no hits & (original description: no original description) 0.834939475593244 64 evm.model.tig00000133.43 no hits & (original description: no original description) 0.8336092891995587 65 evm.model.tig00001413.5 no hits & (original description: no original description) 0.8316969447514122 67 evm.model.tig00000076.132 (at1g48630 : 97.4) Encodes a protein with similarity to mammalian RACKs. RACKs function to shuttle activated protein kinase C to different subcellular sites and may also function as a scaffold through physical interactions with other proteins. RACK1B has no phenotype on its own and probably acts redundantly with RACK1A and RACK1C.; receptor for activated C kinase 1B (RACK1B_AT); FUNCTIONS IN: nucleotide binding; INVOLVED IN: shoot development, root development; LOCATED IN: cytosolic ribosome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: receptor for activated C kinase 1C (TAIR:AT3G18130.1); Has 89864 Blast hits to 37441 proteins in 950 species: Archae - 80; Bacteria - 10219; Metazoa - 35696; Fungi - 20361; Plants - 11462; Viruses - 9; Other Eukaryotes - 12037 (source: NCBI BLink). & (p25387|gblp_chlre : 91.7) Guanine nucleotide-binding protein subunit beta-like protein - Chlamydomonas reinhardtii & (reliability: 186.4) & (original description: no original description) 0.8305656789943696 69 evm.model.tig00000158.117 no hits & (original description: no original description) 0.8287059451336838 70 evm.model.tig00021013.41 (at5g14230 : 108.0) CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: XB3 ortholog 2 in Arabidopsis thaliana (TAIR:AT5G57740.1); Has 66374 Blast hits to 25358 proteins in 1201 species: Archae - 121; Bacteria - 8133; Metazoa - 29530; Fungi - 5885; Plants - 3349; Viruses - 785; Other Eukaryotes - 18571 (source: NCBI BLink). & (q8vyx2|akt1_orysa : 89.7) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (reliability: 216.0) & (original description: no original description) 0.8245125998905659 73 evm.model.tig00020553.150 no hits & (original description: no original description) 0.8235439184297361 74 evm.model.tig00000523.50 no hits & (original description: no original description) 0.8226718220593501 75 evm.model.tig00000851.10 (at1g59820 : 699.0) Encodes a phospholipid translocase. Involved in secretory vesicle formation from trans-Golgi in peripheral columella cells at the root tip. Mutants have short primary roots and grow slower.; aminophospholipid ATPase 3 (ALA3); FUNCTIONS IN: phospholipid transporter activity, ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: Golgi vesicle budding, shoot development, root development; LOCATED IN: Golgi apparatus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, phospholipid-translocating, flippase (InterPro:IPR006539), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT1G17500.1); Has 12776 Blast hits to 11290 proteins in 1545 species: Archae - 148; Bacteria - 4231; Metazoa - 2905; Fungi - 2108; Plants - 937; Viruses - 1; Other Eukaryotes - 2446 (source: NCBI BLink). & (q8run1|aca3_orysa : 88.6) Calcium-transporting ATPase 3, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 3) - Oryza sativa (Rice) & (reliability: 1286.0) & (original description: no original description) 0.8207043465322758 76 evm.model.tig00001413.4 no hits & (original description: no original description) 0.8195943521332485 83 evm.model.tig00000523.49 no hits & (original description: no original description) 0.8194506258352504 79 evm.model.tig00000459.37 no hits & (original description: no original description) 0.8191778838446018 80 evm.model.tig00020563.131 no hits & (original description: no original description) 0.8186909188898894 81 evm.model.tig00000342.22 no hits & (original description: no original description) 0.8168636078223804 83 evm.model.tig00000828.11 (q39610|dyha_chlre : 234.0) Dynein alpha chain, flagellar outer arm (DHC alpha) - Chlamydomonas reinhardtii & (at1g18610 : 95.9) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch repeat type 2 (InterPro:IPR011498), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G74150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 191.8) & (original description: no original description) 0.8149845392580591 86 evm.model.tig00000042.116 no hits & (original description: no original description) 0.8146999790731462 87 evm.model.tig00000581.10 no hits & (original description: no original description) 0.8143708346672799 88 evm.model.tig00020848.63 no hits & (original description: no original description) 0.8076932436986146 94 evm.model.tig00000342.13 (at4g17080 : 125.0) Histone H3 K4-specific methyltransferase SET7/9 family protein; CONTAINS InterPro DOMAIN/s: MORN motif (InterPro:IPR003409); BEST Arabidopsis thaliana protein match is: Histone H3 K4-specific methyltransferase SET7/9 family protein (TAIR:AT2G35170.1); Has 26543 Blast hits to 6479 proteins in 565 species: Archae - 0; Bacteria - 4119; Metazoa - 3892; Fungi - 164; Plants - 2567; Viruses - 0; Other Eukaryotes - 15801 (source: NCBI BLink). & (q6ex42|pi5k1_orysa : 102.0) Phosphatidylinositol-4-phosphate 5-kinase 1 precursor (EC 2.7.1.68) (1-phosphatidylinositol-4-phosphate kinase) (PIP5K) (PtdIns(4)P-5-kinase) (Diphosphoinositide kinase) - Oryza sativa (Rice) & (reliability: 250.0) & (original description: no original description) 0.8070445469417284 94 evm.model.tig00000431.19 no hits & (original description: no original description) 0.8048730988958449 97 evm.model.tig00000042.151 (at5g52820 : 105.0) WD-40 repeat family protein / notchless protein, putative; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), NLE (InterPro:IPR012972), WD40 repeat (InterPro:IPR001680), G-protein, beta subunit (InterPro:IPR001632), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p25387|gblp_chlre : 95.1) Guanine nucleotide-binding protein subunit beta-like protein - Chlamydomonas reinhardtii & (reliability: 206.0) & (original description: no original description) 0.8048311931536086 98 evm.model.tig00000480.16 no hits & (original description: no original description) 0.8041299038511817 100