Sequence Description Alias PCC hrr evm.model.tig00001042.26 (at2g02710 : 165.0) Encodes a putative blue light receptor protein.; PAS/LOV PROTEIN C (PLPC); FUNCTIONS IN: two-component sensor activity, signal transducer activity; INVOLVED IN: signal transduction, regulation of transcription, DNA-dependent, two-component signal transduction system (phosphorelay); LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), PAS-associated, C-terminal (InterPro:IPR000700); BEST Arabidopsis thaliana protein match is: phototropin 2 (TAIR:AT5G58140.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q67ux0|ado2_orysa : 83.6) Putative adagio-like protein 2 - Oryza sativa (Rice) & (reliability: 330.0) & (original description: no original description) 0.9097840383428153 1 evm.model.tig00000113.130 no hits & (original description: no original description) 0.8691939368118057 4 evm.model.tig00021290.4 no hits & (original description: no original description) 0.8545253885190865 11 evm.model.tig00020961.12 no hits & (original description: no original description) 0.8537369750118229 9 evm.model.tig00020830.67 no hits & (original description: no original description) 0.8506051862449544 22 evm.model.tig00021434.34 no hits & (original description: no original description) 0.8391238282740964 22 evm.model.tig00000405.60 no hits & (original description: no original description) 0.8343310560473578 21 evm.model.tig00020816.19 no hits & (original description: no original description) 0.8314016427910959 8 evm.model.tig00020564.47 no hits & (original description: no original description) 0.8227963545342635 9 evm.model.tig00000806.36 no hits & (original description: no original description) 0.8193280422974956 36 evm.model.tig00021464.2 no hits & (original description: no original description) 0.8186311033515974 62 evm.model.tig00000911.9 no hits & (original description: no original description) 0.8147476401371029 20 evm.model.tig00021098.23 no hits & (original description: no original description) 0.8054944168579936 23 evm.model.tig00020892.8 no hits & (original description: no original description) 0.8052763088234114 17 evm.model.tig00000113.129 (at1g68710 : 403.0) ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: metabolic process, phospholipid transport, ATP biosynthetic process; LOCATED IN: mitochondrion, integral to membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, phospholipid-translocating, flippase (InterPro:IPR006539), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT1G26130.2); Has 13629 Blast hits to 12474 proteins in 1825 species: Archae - 135; Bacteria - 4718; Metazoa - 3129; Fungi - 2128; Plants - 1014; Viruses - 3; Other Eukaryotes - 2502 (source: NCBI BLink). & (reliability: 806.0) & (original description: no original description) 0.8043660443032732 55 evm.model.tig00020816.11 no hits & (original description: no original description) 0.7993645308919537 62 evm.model.tig00021257.24 no hits & (original description: no original description) 0.7991808981823436 64 evm.model.tig00000475.5 no hits & (original description: no original description) 0.7983001416835022 43 evm.model.tig00020563.130 no hits & (original description: no original description) 0.7948512835929404 28 evm.model.tig00021168.31 no hits & (original description: no original description) 0.7908189010310971 21 evm.model.tig00000378.9 no hits & (original description: no original description) 0.7904478563651067 36 evm.model.tig00000113.131 no hits & (original description: no original description) 0.7866281652338308 90 evm.model.tig00000215.46 (at4g04955 : 233.0) Encodes an allantoinase which is involved in allantoin degradation and assimilation. Gene expression was induced when allantoin was added to the medium. The insertion mutant, ataln m2-1, did not grow well on the MS medium where allantoin, instead of ammonium nitrate, was supplied.; allantoinase (ALN); CONTAINS InterPro DOMAIN/s: Amidohydrolase 1 (InterPro:IPR006680), Allantoinase (InterPro:IPR017593), Metal-dependent hydrolase, composite domain (InterPro:IPR011059); BEST Arabidopsis thaliana protein match is: pyrimidine 2 (TAIR:AT5G12200.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 466.0) & (original description: no original description) 0.7831957512024756 24 evm.model.tig00000310.79 no hits & (original description: no original description) 0.7827413365312342 63 evm.model.tig00000767.29 no hits & (original description: no original description) 0.7822677639959904 27 evm.model.tig00000989.41 no hits & (original description: no original description) 0.7811928679452275 99 evm.model.tig00020961.55 no hits & (original description: no original description) 0.7747054333387546 29 evm.model.tig00021582.44 (at5g35840 : 84.3) Encodes the apoprotein of phytochrome;one of a family of photoreceptors that modulate plant growth and development.; phytochrome C (PHYC); FUNCTIONS IN: protein histidine kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610), Phytochrome, central region (InterPro:IPR013515), Signal transduction histidine kinase, core (InterPro:IPR005467), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), Phytochrome chromophore attachment domain (InterPro:IPR016132), ATPase-like, ATP-binding domain (InterPro:IPR003594), PAS fold-2 (InterPro:IPR013654), Phytochrome A/B/C/D/E (InterPro:IPR012129), Phytochrome (InterPro:IPR001294), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Phytochrome chromophore binding site (InterPro:IPR013516), GAF (InterPro:IPR003018); BEST Arabidopsis thaliana protein match is: phytochrome A (TAIR:AT1G09570.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p36505|phy1_phypa : 84.0) Phytochrome 1 - Physcomitrella patens (Moss) & (reliability: 168.6) & (original description: no original description) 0.7718406905225377 57 evm.model.tig00021281.37 no hits & (original description: no original description) 0.770947753748533 38 evm.model.tig00000769.29 no hits & (original description: no original description) 0.7683958327275114 81 evm.model.tig00000076.8 no hits & (original description: no original description) 0.7649182309084209 35 evm.model.tig00000317.21 no hits & (original description: no original description) 0.7629769406726266 89 evm.model.tig00001368.5 no hits & (original description: no original description) 0.7622399386108113 75 evm.model.tig00020675.98 no hits & (original description: no original description) 0.7613725328550781 38 evm.model.tig00000093.172 no hits & (original description: no original description) 0.7566425386105091 47 evm.model.tig00000911.10 no hits & (original description: no original description) 0.7543431570529392 41 evm.model.tig00000128.15 (at1g07810 : 269.0) Encodes an ER-type Ca2+-pumping ATPase.; ER-type Ca2+-ATPase 1 (ECA1); FUNCTIONS IN: calcium-transporting ATPase activity; INVOLVED IN: manganese ion transport, response to cadmium ion, cellular manganese ion homeostasis, calcium ion transport, response to manganese ion; LOCATED IN: endoplasmic reticulum, plasma membrane, endoplasmic reticulum membrane; EXPRESSED IN: guard cell, callus, cultured cell; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting (InterPro:IPR005782), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068); BEST Arabidopsis thaliana protein match is: endomembrane-type CA-ATPase 4 (TAIR:AT1G07670.1); Has 52947 Blast hits to 34771 proteins in 3297 species: Archae - 1117; Bacteria - 37251; Metazoa - 4506; Fungi - 2912; Plants - 2416; Viruses - 3; Other Eukaryotes - 4742 (source: NCBI BLink). & (q6atv4|aca2_orysa : 206.0) Calcium-transporting ATPase 2, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 2) - Oryza sativa (Rice) & (reliability: 538.0) & (original description: no original description) 0.7523882393167549 42 evm.model.tig00021094.7 (q9zwi9|phyc_orysa : 156.0) Phytochrome C - Oryza sativa (Rice) & (at5g35840 : 144.0) Encodes the apoprotein of phytochrome;one of a family of photoreceptors that modulate plant growth and development.; phytochrome C (PHYC); FUNCTIONS IN: protein histidine kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610), Phytochrome, central region (InterPro:IPR013515), Signal transduction histidine kinase, core (InterPro:IPR005467), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), Phytochrome chromophore attachment domain (InterPro:IPR016132), ATPase-like, ATP-binding domain (InterPro:IPR003594), PAS fold-2 (InterPro:IPR013654), Phytochrome A/B/C/D/E (InterPro:IPR012129), Phytochrome (InterPro:IPR001294), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Phytochrome chromophore binding site (InterPro:IPR013516), GAF (InterPro:IPR003018); BEST Arabidopsis thaliana protein match is: phytochrome A (TAIR:AT1G09570.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 288.0) & (original description: no original description) 0.751470607046747 66 evm.model.tig00000985.6 no hits & (original description: no original description) 0.7506959744790174 92 evm.model.tig00000912.2 no hits & (original description: no original description) 0.7487225184686391 49 evm.model.tig00020556.81 (at1g14000 : 80.5) Encodes a protein with similarity to members of the C1 subgroup of MAP kinase kinase kinases. Interacts physically with the receptor kinase BRL2/VH1 and appears to be involved in auxin and brassinosteriod signaling.; VH1-interacting kinase (VIK); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Integrin-linked protein kinase (InterPro:IPR016253), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Integrin-linked protein kinase family (TAIR:AT3G58760.1); Has 139285 Blast hits to 133759 proteins in 5118 species: Archae - 180; Bacteria - 15286; Metazoa - 53967; Fungi - 12530; Plants - 33711; Viruses - 527; Other Eukaryotes - 23084 (source: NCBI BLink). & (reliability: 161.0) & (original description: no original description) 0.7427102142435227 75 evm.model.tig00000786.13 no hits & (original description: no original description) 0.739760677413239 62 evm.model.tig00000430.53 no hits & (original description: no original description) 0.7395027607402668 75 evm.model.tig00020614.61 no hits & (original description: no original description) 0.7365701129121687 88 evm.model.tig00020943.95 (at1g28010 : 144.0) P-glycoprotein 14 (PGP14); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, LP.02 two leaves visible, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 13 (TAIR:AT1G27940.1); Has 862231 Blast hits to 397322 proteins in 4187 species: Archae - 14893; Bacteria - 671155; Metazoa - 18443; Fungi - 12341; Plants - 9398; Viruses - 47; Other Eukaryotes - 135954 (source: NCBI BLink). & (q6yuu5|mdr_orysa : 141.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 288.0) & (original description: no original description) 0.7362534069198159 65 evm.model.tig00000128.14 no hits & (original description: no original description) 0.7354180722978825 66 evm.model.tig00021013.43 no hits & (original description: no original description) 0.7350479738353692 68 evm.model.tig00000704.25 no hits & (original description: no original description) 0.7312622497760376 71 evm.model.tig00000451.14 (at3g63480 : 168.0) ATP binding microtubule motor family protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: phragmoplast-associated kinesin-related protein 1 (TAIR:AT4G14150.1); Has 10148 Blast hits to 9733 proteins in 305 species: Archae - 0; Bacteria - 0; Metazoa - 4474; Fungi - 1347; Plants - 1834; Viruses - 0; Other Eukaryotes - 2493 (source: NCBI BLink). & (p46869|fla10_chlre : 155.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 336.0) & (original description: no original description) 0.72820277675688 76 evm.model.tig00021517.22 (at5g12200 : 267.0) Encodes a protein with dihydropyrimidine amidohydrolase activity. It localizes to the secretory system and plays a role in uracil metabolism.; pyrimidine 2 (PYD2); CONTAINS InterPro DOMAIN/s: D-hydantoinase (InterPro:IPR011778), Amidohydrolase 1 (InterPro:IPR006680), Metal-dependent hydrolase, composite domain (InterPro:IPR011059); BEST Arabidopsis thaliana protein match is: allantoinase (TAIR:AT4G04955.1); Has 11476 Blast hits to 11454 proteins in 2253 species: Archae - 299; Bacteria - 6727; Metazoa - 670; Fungi - 189; Plants - 91; Viruses - 0; Other Eukaryotes - 3500 (source: NCBI BLink). & (reliability: 534.0) & (original description: no original description) 0.725375943488464 78 evm.model.tig00000114.38 (at5g47010 : 98.6) Required for nonsense-mediated mRNA decay. Involved in RNA interference. lba1 mutants has reduced sugar-induced expression of Atb- amylase, is hypersensitive to glucose and abscisic acid and resistant to mannose, and shows early flowering, short day-sensitive growth, and seed germination phenotypes.; LOW-LEVEL BETA-AMYLASE 1 (LBA1); FUNCTIONS IN: in 6 functions; INVOLVED IN: sugar mediated signaling pathway, RNA interference, nuclear-transcribed mRNA catabolic process, nonsense-mediated decay, response to sucrose stimulus; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), RNA helicase UPF1, UPF2-interacting domain (InterPro:IPR018999); BEST Arabidopsis thaliana protein match is: DNA-binding protein, putative (TAIR:AT2G03270.1); Has 9640 Blast hits to 8330 proteins in 1330 species: Archae - 182; Bacteria - 2840; Metazoa - 3001; Fungi - 1369; Plants - 807; Viruses - 148; Other Eukaryotes - 1293 (source: NCBI BLink). & (reliability: 197.2) & (original description: no original description) 0.7233640977519346 81 evm.model.tig00001229.21 (at1g13350 : 87.8) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G53640.1). & (reliability: 175.6) & (original description: no original description) 0.7223549820130386 82 evm.model.tig00000269.18 (at5g52882 : 94.4) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G28000.1); Has 40812 Blast hits to 38433 proteins in 3247 species: Archae - 1565; Bacteria - 18648; Metazoa - 4821; Fungi - 3639; Plants - 3257; Viruses - 39; Other Eukaryotes - 8843 (source: NCBI BLink). & (reliability: 171.8) & (original description: no original description) 0.7194267665209114 85 evm.model.tig00000459.90 (at3g16340 : 396.0) pleiotropic drug resistance 1 (PDR1); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), Pleiotropic drug resistance protein PDR (InterPro:IPR005285), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 7 (TAIR:AT1G15210.1). & (q8gu92|pdr2_orysa : 375.0) Probable pleiotropic drug resistance protein 2 - Oryza sativa (Rice) & (reliability: 792.0) & (original description: no original description) 0.7192678396579595 86 evm.model.tig00000480.41 no hits & (original description: no original description) 0.7144422554198566 92 evm.model.tig00020723.34 (at3g45240 : 202.0) Encodes a geminivirus Rep interacting kinase (GRIK; GRIK1/AT3G45240, GRIK2/AT5G60550). GRIKs are SnRK1 (SNF1-related kinases) activating kinases. Both GRIKs specifically bind to the SnRK1 catalytic subunit and phosphorylate the equivalent threonine residue in its activation loop in vitro.; geminivirus rep interacting kinase 1 (GRIK1); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Calcium/calmodulin-dependent protein kinase kinase (InterPro:IPR020657), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: geminivirus rep interacting kinase 2 (TAIR:AT5G60550.1). & (q6x4a2|cipk1_orysa : 156.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 404.0) & (original description: no original description) 0.7132609097909037 94 evm.model.tig00000940.1 (at4g01610 : 175.0) Cysteine proteinases superfamily protein; FUNCTIONS IN: cysteine-type endopeptidase activity, cysteine-type peptidase activity; INVOLVED IN: proteolysis, regulation of catalytic activity; LOCATED IN: vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Peptidase C1A, cathepsin B (InterPro:IPR015643), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169), Peptidase C1A, propeptide (InterPro:IPR012599); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT1G02305.1); Has 7406 Blast hits to 7364 proteins in 687 species: Archae - 57; Bacteria - 153; Metazoa - 3244; Fungi - 4; Plants - 1710; Viruses - 146; Other Eukaryotes - 2092 (source: NCBI BLink). & (p25778|oryc_orysa : 127.0) Oryzain gamma chain precursor (EC 3.4.22.-) - Oryza sativa (Rice) & (reliability: 350.0) & (original description: no original description) 0.7110127213244472 97