Sequence Description Alias PCC hrr evm.model.tig00020684.14 no hits & (original description: no original description) 0.9333802678310551 12 evm.model.tig00021428.14 no hits & (original description: no original description) 0.9301038131430924 5 evm.model.tig00000663.52 no hits & (original description: no original description) 0.9277494586115494 3 evm.model.tig00001376.10 no hits & (original description: no original description) 0.9243506723126427 5 evm.model.tig00001154.35 no hits & (original description: no original description) 0.9241760266921472 9 evm.model.tig00001181.19 (at1g17370 : 177.0) oligouridylate binding protein 1B (UBP1B); FUNCTIONS IN: mRNA 3'-UTR binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G14100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 354.0) & (original description: no original description) 0.9226073543127461 11 evm.model.tig00021433.12 no hits & (original description: no original description) 0.9225075210425735 17 evm.model.tig00000473.2 no hits & (original description: no original description) 0.9215473163265953 8 evm.model.tig00020684.57 no hits & (original description: no original description) 0.9138846356086826 9 evm.model.tig00020510.46 no hits & (original description: no original description) 0.9121584345545701 22 evm.model.tig00020961.140 no hits & (original description: no original description) 0.9114211121693355 36 evm.model.tig00000670.23 (at1g17370 : 117.0) oligouridylate binding protein 1B (UBP1B); FUNCTIONS IN: mRNA 3'-UTR binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G14100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 234.0) & (original description: no original description) 0.9113206923201738 14 evm.model.tig00001437.4 no hits & (original description: no original description) 0.9108561538364608 28 evm.model.tig00001164.9 no hits & (original description: no original description) 0.910574403423312 14 evm.model.tig00001408.13 no hits & (original description: no original description) 0.9077780962705857 15 evm.model.tig00000145.15 no hits & (original description: no original description) 0.9060239258253742 16 evm.model.tig00001292.19 no hits & (original description: no original description) 0.9058052537705032 57 evm.model.tig00000248.7 no hits & (original description: no original description) 0.9056918930895507 19 evm.model.tig00021013.31 no hits & (original description: no original description) 0.9043383870466886 36 evm.model.tig00000767.25 (at5g16280 : 249.0) Tetratricopeptide repeat (TPR)-like superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages. & (reliability: 498.0) & (original description: no original description) 0.9041718793270226 32 evm.model.tig00021234.41 no hits & (original description: no original description) 0.9035384434841529 21 evm.model.tig00020704.51 no hits & (original description: no original description) 0.9032449261596289 42 evm.model.tig00000403.34 no hits & (original description: no original description) 0.9029640558173528 23 evm.model.tig00021127.83 no hits & (original description: no original description) 0.9026972543366544 24 evm.model.tig00000157.90 (at2g04750 : 148.0) Actin binding Calponin homology (CH) domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Calponin-homology (InterPro:IPR016146), Calponin-like actin-binding (InterPro:IPR001715); BEST Arabidopsis thaliana protein match is: fimbrin-like protein 2 (TAIR:AT5G35700.1); Has 4258 Blast hits to 2703 proteins in 202 species: Archae - 0; Bacteria - 4; Metazoa - 3436; Fungi - 331; Plants - 148; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 296.0) & (original description: no original description) 0.9007555245031929 32 evm.model.tig00000145.24 no hits & (original description: no original description) 0.900037740230385 26 evm.model.tig00000984.10 no hits & (original description: no original description) 0.8992573022116238 74 evm.model.tig00021137.11 no hits & (original description: no original description) 0.8960102425944027 28 evm.model.tig00001286.5 no hits & (original description: no original description) 0.8958149658473336 31 evm.model.tig00020537.45 no hits & (original description: no original description) 0.8939274414355529 90 evm.model.tig00000025.34 no hits & (original description: no original description) 0.8938134625533938 46 evm.model.tig00000571.20 no hits & (original description: no original description) 0.8908883811848675 32 evm.model.tig00020892.16 no hits & (original description: no original description) 0.8905947053527251 34 evm.model.tig00000204.104 (at5g38560 : 130.0) Protein kinase superfamily protein; FUNCTIONS IN: structural constituent of cell wall, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Pistil-specific extensin-like protein (InterPro:IPR003882), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G68690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o24585|cri4_maize : 112.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 238.0) & (original description: no original description) 0.8899765986163689 34 evm.model.tig00000204.46 no hits & (original description: no original description) 0.8895702001977435 50 evm.model.tig00001107.13 (at5g02310 : 113.0) Encodes PROTEOLYSIS6 (PRT6), a component of the N-end rule pathway that targets protein degradation through the identity of the amino-terminal residue of specific protein substrates. Another component of the N-end rule pathway is arginyl-tRNA:protein arginyltransferase (ATE). Arabidopsis contains two ATE genes: At5g05700/ATE1, At3g11240/ATE2. PRT6 and ATE were shown to regulate seed after-ripening, seedling sugar sensitivity, seedling lipid breakdown, and abscisic acid (ABA) sensitivity of germination.; proteolysis 6 (PRT6); CONTAINS InterPro DOMAIN/s: Zinc finger, N-recognin, metazoa (InterPro:IPR013993), Zinc finger, N-recognin (InterPro:IPR003126); Has 1893 Blast hits to 778 proteins in 199 species: Archae - 0; Bacteria - 0; Metazoa - 939; Fungi - 577; Plants - 100; Viruses - 0; Other Eukaryotes - 277 (source: NCBI BLink). & (reliability: 226.0) & (original description: no original description) 0.8894018929469686 36 evm.model.tig00021073.37 (at2g26780 : 362.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); Has 448 Blast hits to 380 proteins in 145 species: Archae - 0; Bacteria - 0; Metazoa - 160; Fungi - 190; Plants - 63; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (reliability: 724.0) & (original description: no original description) 0.8887696713996865 61 evm.model.tig00000405.70 no hits & (original description: no original description) 0.8884347717851097 38 evm.model.tig00000367.52 no hits & (original description: no original description) 0.8882601983526351 40 evm.model.tig00020960.9 no hits & (original description: no original description) 0.8874543083532783 41 evm.model.tig00020675.61 no hits & (original description: no original description) 0.8869509926564522 50 evm.model.tig00022075.65 no hits & (original description: no original description) 0.8866121656985531 51 evm.model.tig00020562.33 no hits & (original description: no original description) 0.8865693864221297 93 evm.model.tig00000605.41 no hits & (original description: no original description) 0.8845230024250034 50 evm.model.tig00000498.12 no hits & (original description: no original description) 0.8836284946795516 58 evm.model.tig00000241.127 no hits & (original description: no original description) 0.8834455264987406 48 evm.model.tig00000310.70 (at2g05170 : 122.0) Homologous to yeast VPS11. Forms a complex with VCL1 and AtVPS33. Involved in vacuolar biogenesis.; vacuolar protein sorting 11 (VPS11); FUNCTIONS IN: transporter activity, binding, zinc ion binding; INVOLVED IN: vacuole organization; LOCATED IN: plant-type vacuole membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Vacuolar protein sorting-associated protein 11 (InterPro:IPR016528), Zinc finger, RING-type (InterPro:IPR001841), Armadillo-type fold (InterPro:IPR016024); Has 716 Blast hits to 615 proteins in 203 species: Archae - 0; Bacteria - 2; Metazoa - 251; Fungi - 269; Plants - 42; Viruses - 0; Other Eukaryotes - 152 (source: NCBI BLink). & (reliability: 244.0) & (original description: no original description) 0.8822439481252924 49 evm.model.tig00001181.9 (at1g54080 : 240.0) oligouridylate-binding protein 1A (UBP1A); FUNCTIONS IN: mRNA 3'-UTR binding; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G14100.1); Has 22193 Blast hits to 15481 proteins in 722 species: Archae - 0; Bacteria - 1057; Metazoa - 11734; Fungi - 2918; Plants - 4318; Viruses - 0; Other Eukaryotes - 2166 (source: NCBI BLink). & (q08935|roc1_nicsy : 98.6) 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A) - Nicotiana sylvestris (Wood tobacco) & (reliability: 480.0) & (original description: no original description) 0.8820778651535446 50 evm.model.tig00021135.5 no hits & (original description: no original description) 0.8818512013835537 55 evm.model.tig00000411.68 no hits & (original description: no original description) 0.8814954487658482 52 evm.model.tig00020723.106 no hits & (original description: no original description) 0.8814920408814663 53 evm.model.tig00000488.9 no hits & (original description: no original description) 0.8811673843995999 54 evm.model.tig00020510.145 no hits & (original description: no original description) 0.8810615655354634 55 evm.model.tig00000760.19 no hits & (original description: no original description) 0.8807349726468242 57 evm.model.tig00000241.146 no hits & (original description: no original description) 0.8804574729587771 58 evm.model.tig00001215.18 no hits & (original description: no original description) 0.880390937999581 59 evm.model.tig00021537.14 no hits & (original description: no original description) 0.8802817693246765 60 evm.model.tig00021464.9 no hits & (original description: no original description) 0.879188718805932 99 evm.model.tig00021590.21 no hits & (original description: no original description) 0.879171340523329 63 evm.model.tig00000190.44 no hits & (original description: no original description) 0.8784438595472481 64 evm.model.tig00020556.6 (at3g09080 : 121.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 14743 Blast hits to 9426 proteins in 454 species: Archae - 42; Bacteria - 3876; Metazoa - 4498; Fungi - 2945; Plants - 1499; Viruses - 0; Other Eukaryotes - 1883 (source: NCBI BLink). & (reliability: 242.0) & (original description: no original description) 0.8778331528478879 65 evm.model.tig00000852.4 no hits & (original description: no original description) 0.8765563745138986 67 evm.model.tig00000402.15 no hits & (original description: no original description) 0.8759669306495992 69 evm.model.tig00000655.45 no hits & (original description: no original description) 0.8750379967515627 71 evm.model.tig00000403.70 no hits & (original description: no original description) 0.8749398938655126 72 evm.model.tig00021348.60 no hits & (original description: no original description) 0.8748540728546995 94 evm.model.tig00000042.23 no hits & (original description: no original description) 0.8745004362156549 74 evm.model.tig00001067.15 no hits & (original description: no original description) 0.8742318723460206 75 evm.model.tig00020614.118 no hits & (original description: no original description) 0.8737550442712778 77 evm.model.tig00000101.1 no hits & (original description: no original description) 0.8736502392946691 78 evm.model.tig00020510.47 no hits & (original description: no original description) 0.8727051749490079 79 evm.model.tig00021135.28 no hits & (original description: no original description) 0.8721929918735891 80 evm.model.tig00020911.56 no hits & (original description: no original description) 0.8713785528276266 83 evm.model.tig00001535.6 no hits & (original description: no original description) 0.8711980371590551 84 evm.model.tig00021537.67 no hits & (original description: no original description) 0.8707391145112999 85 evm.model.tig00001368.3 no hits & (original description: no original description) 0.8706563742910127 86 evm.model.tig00021012.37 (at5g42920 : 140.0) Encodes a component of the putative Arabidopsis THO/TREX complex: THO1 or HPR1 (At5g09860), THO2 (At1g24706), THO3 or TEX1 (At5g56130), THO5 (At5g42920, At1g45233), THO6 (At2g19430), and THO7 (At5g16790, At3g02950). THO/TREX complexes in animals have been implicated in the transport of mRNA precursors. Mutants of THO3/TEX1, THO1, THO6 accumulate reduced amount of small interfering (si)RNA, suggesting a role of the putative Arabidopsis THO/TREX in siRNA biosynthesis.; THO5; CONTAINS InterPro DOMAIN/s: THO complex, subunit 5 (InterPro:IPR019163); BEST Arabidopsis thaliana protein match is: THO complex, subunit 5 (TAIR:AT1G45233.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 280.0) & (original description: no original description) 0.8704067420463538 87 evm.model.tig00000545.14 no hits & (original description: no original description) 0.8695233718160973 88 evm.model.tig00001107.29 no hits & (original description: no original description) 0.8693455859030311 90 evm.model.tig00000737.29 no hits & (original description: no original description) 0.8689822235991133 92 evm.model.tig00000219.41 no hits & (original description: no original description) 0.8687994416640391 93 evm.model.tig00021013.40 no hits & (original description: no original description) 0.8680265975627612 95 evm.model.tig00000498.85 no hits & (original description: no original description) 0.8661638484319891 99 evm.model.tig00000852.14 no hits & (original description: no original description) 0.8658887982818911 100