Pp1s34_252V6 expression profile

Sequence Description Alias PCC hrr evm.model.tig00021612.19 no hits & (original description: no original description) 0.9455399338812172 5 evm.model.tig00021042.13 no hits & (original description: no original description) 0.9298348333832506 17 evm.model.tig00000113.22 no hits & (original description: no original description) 0.9284882375112874 23 evm.model.tig00001181.27 (at2g17700 : 129.0) ACT-like protein tyrosine kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation, metabolic process; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Amino acid-binding ACT (InterPro:IPR002912), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine protein kinase-like, ATMRK (InterPro:IPR015783), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: ACT-like protein tyrosine kinase family protein (TAIR:AT4G35780.1); Has 131925 Blast hits to 129768 proteins in 5057 species: Archae - 139; Bacteria - 14109; Metazoa - 50800; Fungi - 11992; Plants - 33819; Viruses - 503; Other Eukaryotes - 20563 (source: NCBI BLink). & (reliability: 258.0) & (original description: no original description) 0.9284611687722866 4 evm.model.tig00001472.5 no hits & (original description: no original description) 0.9206440935450659 34 evm.model.tig00000821.55 no hits & (original description: no original description) 0.9201200744270837 22 evm.model.tig00000769.24 no hits & (original description: no original description) 0.9174746350945278 31 evm.model.tig00020604.23 no hits & (original description: no original description) 0.9170101047570706 9 evm.model.tig00021133.6 no hits & (original description: no original description) 0.9168581177502382 20 evm.model.tig00001154.1 no hits & (original description: no original description) 0.9159424924345642 10 evm.model.tig00021571.4 no hits & (original description: no original description) 0.9149511740379647 14 evm.model.tig00000498.13 no hits & (original description: no original description) 0.9136343104988646 41 evm.model.tig00020693.39 no hits & (original description: no original description) 0.9130527623225041 13 evm.model.tig00020801.45 no hits & (original description: no original description) 0.9110317462020804 48 evm.model.tig00021070.6 no hits & (original description: no original description) 0.9083028584467023 40 evm.model.tig00021348.61 no hits & (original description: no original description) 0.9066843965992434 16 evm.model.tig00020557.29 no hits & (original description: no original description) 0.9044037172010512 17 evm.model.tig00020693.17 no hits & (original description: no original description) 0.9032766525556136 28 evm.model.tig00000881.25 no hits & (original description: no original description) 0.896003932260841 19 evm.model.tig00000194.99 no hits & (original description: no original description) 0.8936589825981043 61 evm.model.tig00001098.4 no hits & (original description: no original description) 0.8923611872531017 54 evm.model.tig00000383.49 (at4g08500 : 80.5) Encodes a member of the A1 subgroup of the MEKK (MAPK/ERK kinase kinase) family. MEKK is another name for Mitogen-Activated Protein Kinase Kinase Kinase (MAPKKK or MAP3K). This subgroup has four members: At4g08500 (MEKK1, also known as ARAKIN, MAP3Kb1, MAPKKK8), At4g08480 (MEKK2, also known as MAP3Kb4, MAPKKK9), At4g08470 (MEKK3, also known as MAP3Kb3, MAPKKK10) and At4g12020 (MEKK4, also known as MAP3Kb5, MAPKKK11, WRKY19). Nomenclatures for mitogen-activated protein kinases are described in Trends in Plant Science 2002, 7(7):301. Mediates cold, salt, cadmium and wounding stress signalling. Phosphorylates MEK1.; MAPK/ERK kinase kinase 1 (MEKK1); FUNCTIONS IN: protein binding, kinase binding, DNA binding, MAP kinase kinase kinase activity, kinase activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 9 (TAIR:AT4G08480.1); Has 132336 Blast hits to 130259 proteins in 4567 species: Archae - 142; Bacteria - 14700; Metazoa - 49430; Fungi - 12971; Plants - 32949; Viruses - 685; Other Eukaryotes - 21459 (source: NCBI BLink). & (reliability: 161.0) & (original description: no original description) 0.8879835521902462 36 evm.model.tig00000119.4 no hits & (original description: no original description) 0.8879179929143954 85 evm.model.tig00020849.7 no hits & (original description: no original description) 0.887091045325741 81 evm.model.tig00021036.55 no hits & (original description: no original description) 0.8870864772615726 39 evm.model.tig00000204.67 no hits & (original description: no original description) 0.8851612838179483 57 evm.model.tig00000042.160 (at2g48060 : 83.2) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: shoot, sperm cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3595 (InterPro:IPR021999); Has 533 Blast hits to 341 proteins in 95 species: Archae - 2; Bacteria - 15; Metazoa - 318; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink). & (reliability: 166.4) & (original description: no original description) 0.8836709713441977 57 evm.model.tig00000851.5 (at1g19780 : 119.0) member of Cyclic nucleotide gated channel family; cyclic nucleotide gated channel 8 (CNGC8); FUNCTIONS IN: ion channel activity, cyclic nucleotide binding, calmodulin binding; INVOLVED IN: ion transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: cyclic nucleotide gated channel 7 (TAIR:AT1G15990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q8vyx2|akt1_orysa : 106.0) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (reliability: 232.0) & (original description: no original description) 0.8825378211799957 46 evm.model.tig00020563.92 no hits & (original description: no original description) 0.8820470822919629 66 evm.model.tig00021038.41 no hits & (original description: no original description) 0.8813783634128238 34 evm.model.tig00000670.2 no hits & (original description: no original description) 0.8767068910392676 56 evm.model.tig00020592.14 no hits & (original description: no original description) 0.8761480528078913 87 evm.model.tig00000789.8 no hits & (original description: no original description) 0.8760317645017455 36 evm.model.tig00021489.31 (p26969|gcsp_pea : 979.0) Glycine dehydrogenase [decarboxylating], mitochondrial precursor (EC 1.4.4.2) (Glycine decarboxylase) (Glycine cleavage system P-protein) - Pisum sativum (Garden pea) & (at4g33010 : 975.0) glycine decarboxylase P-protein 1 (GLDP1); FUNCTIONS IN: glycine dehydrogenase (decarboxylating) activity, protein binding; INVOLVED IN: glycine catabolic process, response to cadmium ion, glycine decarboxylation via glycine cleavage system; LOCATED IN: mitochondrion, apoplast, glycine cleavage complex, chloroplast; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Glycine cleavage system P-protein-like (InterPro:IPR020581), Glycine cleavage system P-protein (InterPro:IPR003437), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Glycine cleavage system P-protein, N-terminal (InterPro:IPR020580); BEST Arabidopsis thaliana protein match is: glycine decarboxylase P-protein 2 (TAIR:AT2G26080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1950.0) & (original description: no original description) 0.8745186579439349 41 evm.model.tig00000157.108 (at1g66340 : 109.0) Similar to prokaryote sensory transduction proteins. Contains a histidine kinase and a response regulator domain. Homodimer. Membrane component. Binds ethylene. Mutations affect ethylene binding and metabolism of other plant hormones such as auxin, cytokinins, ABA and gibberellic acid. Ethylene receptor. Has histidine kinase activity. Is regulated by RTE1.; ETHYLENE RESPONSE 1 (ETR1); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), Signal transduction histidine kinase, core (InterPro:IPR005467), Signal transduction histidine kinase, hybrid-type, ethylene sensor (InterPro:IPR014525), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), GAF (InterPro:IPR003018), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: ethylene response sensor 1 (TAIR:AT2G40940.1); Has 102721 Blast hits to 98263 proteins in 3046 species: Archae - 757; Bacteria - 90102; Metazoa - 18; Fungi - 1611; Plants - 2314; Viruses - 21; Other Eukaryotes - 7898 (source: NCBI BLink). & (o48929|etr1_tobac : 91.7) Ethylene receptor (EC 2.7.13.3) (NT-ETR1) - Nicotiana tabacum (Common tobacco) & (reliability: 199.6) & (original description: no original description) 0.8743593913902928 39 evm.model.tig00020904.65 no hits & (original description: no original description) 0.8740297893791396 40 evm.model.tig00001249.8 (at5g53080 : 80.9) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; LOCATED IN: chloroplast; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 161.8) & (original description: no original description) 0.8722935823237249 41 evm.model.tig00020610.56 no hits & (original description: no original description) 0.8720392272414977 42 evm.model.tig00000093.78 no hits & (original description: no original description) 0.8714039048204055 59 evm.model.tig00000459.2 no hits & (original description: no original description) 0.8705364826563008 52 evm.model.tig00000262.7 no hits & (original description: no original description) 0.8673609672056669 59 evm.model.tig00000681.11 no hits & (original description: no original description) 0.8672318867416302 98 evm.model.tig00021434.63 (at1g73920 : 164.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: AB-hydrolase-associated lipase region (InterPro:IPR006693); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G18460.1); Has 1707 Blast hits to 1690 proteins in 186 species: Archae - 0; Bacteria - 0; Metazoa - 1166; Fungi - 276; Plants - 162; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink). & (reliability: 328.0) & (original description: no original description) 0.8670067205028986 53 evm.model.tig00000229.4 (at1g21580 : 127.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); Has 6412 Blast hits to 4180 proteins in 441 species: Archae - 2; Bacteria - 615; Metazoa - 1993; Fungi - 936; Plants - 1540; Viruses - 149; Other Eukaryotes - 1177 (source: NCBI BLink). & (reliability: 254.0) & (original description: no original description) 0.8637076839869258 54 evm.model.tig00000449.33 no hits & (original description: no original description) 0.8636426080236621 55 evm.model.tig00020592.53 no hits & (original description: no original description) 0.8628327922612938 56 evm.model.tig00001029.39 no hits & (original description: no original description) 0.8626296038141104 93 evm.model.tig00001094.22 no hits & (original description: no original description) 0.8622740392067083 59 evm.model.tig00000402.24 no hits & (original description: no original description) 0.8618081814324302 62 evm.model.tig00001181.4 no hits & (original description: no original description) 0.8607878720252368 64 evm.model.tig00021374.45 no hits & (original description: no original description) 0.8590575382753993 66 evm.model.tig00001416.6 (at2g17700 : 109.0) ACT-like protein tyrosine kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation, metabolic process; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Amino acid-binding ACT (InterPro:IPR002912), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine protein kinase-like, ATMRK (InterPro:IPR015783), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: ACT-like protein tyrosine kinase family protein (TAIR:AT4G35780.1); Has 131925 Blast hits to 129768 proteins in 5057 species: Archae - 139; Bacteria - 14109; Metazoa - 50800; Fungi - 11992; Plants - 33819; Viruses - 503; Other Eukaryotes - 20563 (source: NCBI BLink). & (reliability: 218.0) & (original description: no original description) 0.8581608142052595 67 evm.model.tig00000402.7 no hits & (original description: no original description) 0.8574496251630679 68 evm.model.tig00000227.55 no hits & (original description: no original description) 0.8567804583145514 69 evm.model.tig00020849.17 no hits & (original description: no original description) 0.8562033773180502 70 evm.model.tig00000984.21 no hits & (original description: no original description) 0.8561433196805337 71 evm.model.tig00000144.126 (at1g05460 : 147.0) Encodes a protein with similarity to RNA helicases. Mutants are defective in post-transcriptional gene silencing.; SILENCING DEFECTIVE (SDE3); FUNCTIONS IN: RNA helicase activity; INVOLVED IN: virus induced gene silencing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), DNA helicase, UvrD/REP type (InterPro:IPR000212); BEST Arabidopsis thaliana protein match is: RNA helicase, putative (TAIR:AT5G47010.1); Has 8827 Blast hits to 7137 proteins in 1206 species: Archae - 219; Bacteria - 2402; Metazoa - 1784; Fungi - 1431; Plants - 666; Viruses - 219; Other Eukaryotes - 2106 (source: NCBI BLink). & (reliability: 294.0) & (original description: no original description) 0.8556257706968458 72 evm.model.tig00020825.10 no hits & (original description: no original description) 0.8555102210558002 73 evm.model.tig00021746.9 no hits & (original description: no original description) 0.85510594517348 74 evm.model.tig00021257.19 no hits & (original description: no original description) 0.8522982382584262 77 evm.model.tig00000553.32 no hits & (original description: no original description) 0.8522058418810143 79 evm.model.tig00001249.10 no hits & (original description: no original description) 0.8513779148356286 81 evm.model.tig00000789.18 no hits & (original description: no original description) 0.8511874043985225 82 evm.model.tig00021612.10 no hits & (original description: no original description) 0.8506063664207832 83 evm.model.tig00020589.6 no hits & (original description: no original description) 0.8497677546861285 86 evm.model.tig00000555.15 no hits & (original description: no original description) 0.845937673836338 90 evm.model.tig00000076.73 no hits & (original description: no original description) 0.8455655132495911 91 evm.model.tig00000194.57 (at4g25450 : 83.2) member of NAP subfamily; non-intrinsic ABC protein 8 (NAP8); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: transporter associated with antigen processing protein 2 (TAIR:AT5G39040.1); Has 420091 Blast hits to 380969 proteins in 4118 species: Archae - 7380; Bacteria - 326284; Metazoa - 9897; Fungi - 7311; Plants - 5559; Viruses - 14; Other Eukaryotes - 63646 (source: NCBI BLink). & (reliability: 166.4) & (original description: no original description) 0.8442008481251982 98 evm.model.tig00020965.15 no hits & (original description: no original description) 0.8436053327513695 100

Expression profile for Pp1s34_252V6 (Pp1s34_252V6)

All conditions

Tissue specificity

ZT time