Sequence Description Alias PCC hrr evm.model.tig00001042.24 no hits & (original description: no original description) 0.934586857993767 7 evm.model.tig00021428.20 no hits & (original description: no original description) 0.9270646600639867 4 evm.model.tig00000254.41 no hits & (original description: no original description) 0.9053097665304881 25 evm.model.tig00001007.5 no hits & (original description: no original description) 0.9022788588157741 19 evm.model.tig00020824.47 no hits & (original description: no original description) 0.9021687319164932 7 evm.model.tig00020537.30 (at4g03020 : 211.0) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat (InterPro:IPR001680), WD repeat protein 23 (InterPro:IPR017399), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G43770.1). & (reliability: 422.0) & (original description: no original description) 0.8996019323121355 20 evm.model.tig00020723.5 (at2g07680 : 243.0) member of MRP subfamily; multidrug resistance-associated protein 11 (MRP11); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 2 (TAIR:AT2G34660.2); Has 539195 Blast hits to 324792 proteins in 3896 species: Archae - 9326; Bacteria - 437824; Metazoa - 12258; Fungi - 6863; Plants - 5577; Viruses - 6; Other Eukaryotes - 67341 (source: NCBI BLink). & (reliability: 486.0) & (original description: no original description) 0.8974756779164061 8 evm.model.tig00021795.11 no hits & (original description: no original description) 0.8915643746669626 38 evm.model.tig00000144.115 no hits & (original description: no original description) 0.8912264539801121 16 evm.model.tig00020806.7 no hits & (original description: no original description) 0.8904576456036549 99 evm.model.tig00020675.91 (at1g29120 : 122.0) Hydrolase-like protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF676, hydrolase-like (InterPro:IPR007751); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G25770.1). & (reliability: 244.0) & (original description: no original description) 0.8901335220385851 11 evm.model.tig00020710.72 no hits & (original description: no original description) 0.8893028368242833 41 evm.model.tig00000248.36 no hits & (original description: no original description) 0.8882847614907391 20 evm.model.tig00021332.12 no hits & (original description: no original description) 0.8874207099979928 34 evm.model.tig00021181.10 no hits & (original description: no original description) 0.8859450538531015 15 evm.model.tig00020614.107 no hits & (original description: no original description) 0.8832672098835118 17 evm.model.tig00000042.227 no hits & (original description: no original description) 0.882665978666534 34 evm.model.tig00020723.19 (at5g43710 : 335.0) Glycosyl hydrolase family 47 protein; FUNCTIONS IN: mannosyl-oligosaccharide 1,2-alpha-mannosidase activity, alpha-mannosidase activity, calcium ion binding; INVOLVED IN: protein amino acid N-linked glycosylation; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 47 (InterPro:IPR001382); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 47 protein (TAIR:AT1G27520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 670.0) & (original description: no original description) 0.8823289576715785 37 evm.model.tig00001355.3 (at1g11910 : 214.0) Encodes an aspartic proteinase that forms a heterodimer and is stable over a broad pH range (ph 3-8).; aspartic proteinase A1 (APA1); FUNCTIONS IN: endopeptidase activity; INVOLVED IN: proteolysis, response to salt stress; LOCATED IN: vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Saposin-like (InterPro:IPR011001), Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Saposin-like type B, 1 (InterPro:IPR007856), Saposin-like type B, 2 (InterPro:IPR008138), Saposin B (InterPro:IPR008139), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Saposin-like aspartyl protease family protein (TAIR:AT1G62290.2); Has 7443 Blast hits to 5200 proteins in 420 species: Archae - 0; Bacteria - 2; Metazoa - 4134; Fungi - 1703; Plants - 675; Viruses - 0; Other Eukaryotes - 929 (source: NCBI BLink). & (p42210|aspr_horvu : 209.0) Phytepsin precursor (EC 3.4.23.40) (Aspartic proteinase) [Contains: Phytepsin 32 kDa subunit; Phytepsin 29 kDa subunit; Phytepsin 16 kDa subunit; Phytepsin 11 kDa subunit] - Hordeum vulgare (Barley) & (reliability: 428.0) & (original description: no original description) 0.881842176173701 38 evm.model.tig00021462.37 no hits & (original description: no original description) 0.8805365505260992 43 evm.model.tig00021105.33 no hits & (original description: no original description) 0.8752116797771244 28 evm.model.tig00000076.160 no hits & (original description: no original description) 0.8750682196799187 28 evm.model.tig00020703.2 no hits & (original description: no original description) 0.874408317186482 54 evm.model.tig00000144.59 (at2g29900 : 230.0) Presenilin-2 (PS2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular signaling pathway; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase A22, presenilin signal peptide (InterPro:IPR006639), Peptidase A22A, presenilin (InterPro:IPR001108); BEST Arabidopsis thaliana protein match is: Presenilin-1 (TAIR:AT1G08700.1); Has 475 Blast hits to 452 proteins in 108 species: Archae - 2; Bacteria - 0; Metazoa - 334; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (reliability: 460.0) & (original description: no original description) 0.8742592838262101 30 evm.model.tig00020614.109 no hits & (original description: no original description) 0.8734132254510079 32 evm.model.tig00000113.44 (at4g38130 : 263.0) Encodes a histone deacetylase that enhances AtERF7-mediated transcriptional repression. Binds SIM3 and ERF7. Expressed in the nucleus in most tissues examined and throughout the life of the plant. Involved in jasmonic acid and ethylene dependent pathogen resistance. The sequence in GenBank has 17 AG dinucleotide repeats missing, which is also missing in Ler shotgun sequence from Cereon. Although it is annotated to be in Columbia, the GB sequence is probably not of Columbia origin. Plays a role in embryogenesis as mutants grown at higher temperatures display abnormalities in the organization of the root and shoot. Plant lines expressing an RNAi construct targeted against HDA19 shows some resistance to agrobacterium-mediated root transformation.; histone deacetylase 1 (HD1); CONTAINS InterPro DOMAIN/s: Histone deacetylase (InterPro:IPR003084), Histone deacetylase superfamily (InterPro:IPR000286); BEST Arabidopsis thaliana protein match is: histone deacetylase 6 (TAIR:AT5G63110.1); Has 8759 Blast hits to 8549 proteins in 1452 species: Archae - 219; Bacteria - 3192; Metazoa - 1525; Fungi - 536; Plants - 478; Viruses - 0; Other Eukaryotes - 2809 (source: NCBI BLink). & (p56521|hdac_maize : 260.0) Probable histone deacetylase (RPD3 homolog) - Zea mays (Maize) & (reliability: 526.0) & (original description: no original description) 0.8729202709991255 74 evm.model.tig00000204.55 no hits & (original description: no original description) 0.8727390448936347 60 evm.model.tig00021374.38 no hits & (original description: no original description) 0.8721964670779543 35 evm.model.tig00000128.17 no hits & (original description: no original description) 0.8717840292055364 56 evm.model.tig00021038.33 no hits & (original description: no original description) 0.8715089631715032 38 evm.model.tig00021014.7 (at5g36880 : 125.0) Encodes a plastidic acetyl-coA synthetase. This enzyme plays a role in converting acetate to acetyl-coA in the plastids. It does not appear to be a major contributor to fatty acid biosynthesis based on mutant phenotypes. The enzyme seems to act as a monomer and may play an important role in preventing the toxic accumulation of fermentation products including acetaldehyde, acetate, and ethanol. It participates in the pyruvate dehydrogenase bypass pathway; acetyl-CoA synthetase (ACS); FUNCTIONS IN: acetate-CoA ligase activity; INVOLVED IN: metabolic process, acetate metabolic process; LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acetate--CoA ligase (InterPro:IPR011904), AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl-activating enzyme 17 (TAIR:AT5G23050.1); Has 68981 Blast hits to 63577 proteins in 3326 species: Archae - 1100; Bacteria - 43606; Metazoa - 2469; Fungi - 2489; Plants - 1499; Viruses - 1; Other Eukaryotes - 17817 (source: NCBI BLink). & (reliability: 250.0) & (original description: no original description) 0.8698299378478622 40 evm.model.tig00021037.50 no hits & (original description: no original description) 0.8695209108436643 54 evm.model.tig00020510.152 no hits & (original description: no original description) 0.8671483607622751 97 evm.model.tig00000145.10 no hits & (original description: no original description) 0.8651589532327801 46 evm.model.tig00000042.59 (at1g66340 : 127.0) Similar to prokaryote sensory transduction proteins. Contains a histidine kinase and a response regulator domain. Homodimer. Membrane component. Binds ethylene. Mutations affect ethylene binding and metabolism of other plant hormones such as auxin, cytokinins, ABA and gibberellic acid. Ethylene receptor. Has histidine kinase activity. Is regulated by RTE1.; ETHYLENE RESPONSE 1 (ETR1); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), Signal transduction histidine kinase, core (InterPro:IPR005467), Signal transduction histidine kinase, hybrid-type, ethylene sensor (InterPro:IPR014525), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), GAF (InterPro:IPR003018), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: ethylene response sensor 1 (TAIR:AT2G40940.1); Has 102721 Blast hits to 98263 proteins in 3046 species: Archae - 757; Bacteria - 90102; Metazoa - 18; Fungi - 1611; Plants - 2314; Viruses - 21; Other Eukaryotes - 7898 (source: NCBI BLink). & (o49230|etr1_braol : 127.0) Ethylene receptor (EC 2.7.13.3) - Brassica oleracea (Wild cabbage) & (reliability: 230.0) & (original description: no original description) 0.8650398051049913 47 evm.model.tig00020825.13 no hits & (original description: no original description) 0.8640771954752594 49 evm.model.tig00001042.25 no hits & (original description: no original description) 0.8629531124104078 99 evm.model.tig00000849.8 no hits & (original description: no original description) 0.8623236192681468 54 evm.model.tig00020801.80 (at1g04830 : 194.0) Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT4G13730.1). & (reliability: 388.0) & (original description: no original description) 0.861692346695333 74 evm.model.tig00000629.4 no hits & (original description: no original description) 0.8610907383607284 58 evm.model.tig00000093.230 no hits & (original description: no original description) 0.8596458294685932 61 evm.model.tig00020675.6 no hits & (original description: no original description) 0.859101071091933 62 evm.model.tig00021357.63 no hits & (original description: no original description) 0.8576960022843841 71 evm.model.tig00021348.72 no hits & (original description: no original description) 0.8565181143276585 66 evm.model.tig00021525.3 no hits & (original description: no original description) 0.8523744650481416 74 evm.model.tig00001030.40 no hits & (original description: no original description) 0.8522259301750006 75 evm.model.tig00000980.30 no hits & (original description: no original description) 0.8495110128653587 80 evm.model.tig00001384.9 no hits & (original description: no original description) 0.8489884232227577 82 evm.model.tig00020944.40 no hits & (original description: no original description) 0.8451764828606784 93 evm.model.tig00001371.4 (at3g59410 : 98.6) GCN2; FUNCTIONS IN: protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, translation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Anticodon-binding (InterPro:IPR004154), Tyrosine-protein kinase, active site (InterPro:IPR008266), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), RWD (InterPro:IPR006575); BEST Arabidopsis thaliana protein match is: Class II aaRS and biotin synthetases superfamily protein (TAIR:AT3G02760.1). & (reliability: 197.2) & (original description: no original description) 0.845052298370028 94 evm.model.tig00021127.66 no hits & (original description: no original description) 0.8446656025634365 96 evm.model.tig00021571.45 no hits & (original description: no original description) 0.843638241053217 98 evm.model.tig00001388.11 no hits & (original description: no original description) 0.8430898331806539 100